Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0004605

Physical Location & Seq

Genomic Coordinates Forward (+)

15185475 .. 15253293

Gene Structure 67819 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG174200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGTGAAAGTCAGAAGGGAACTAATAGAGGAGGCGGTTGTGCATTCAGACAGGAAATTTGGGGTCGAGTCGTGGCCATTATCTGAAGGCAATTGTGACTCGCCTGTTTTGGAGCCAAGCCCTCTTAGTTGGAAAACCAGTGGTCCAACCAGGCGATCATCAAGATGCTGGACAGAGAAAGAGGATAAACTTCTGGTAGAGCTGGTCAGAAAGTTTGATGGGAGTAATTGGAAGCAAATAGCTGCAGGTATCCCTGGCCGTTCAGATGTTCAGTGCCTGCATCGCTGGCAAAAAGTTTTGAATCCTGAAATCATCAAGGGATACTGGACAAAGGAGGAAGATGATTGTATAATCAAACTGGTTGAAAATTATGGTGCTAGAAGATGGTCTGTCATTGCAAAGTTTTTACCAGGTCGAATAGGCAAGCAATGCAGAGAAAGGTGGTACAATCATTTAAGCCCGGCTATAAACAAAGATGCATGGACAGAAGAAGAGGAAAGAATTCTTGCTTTCTACCACCAACAGTATGGTAACAAGTGGGCAGAAATAGCAAGGTTTCTACCTGGAAGGACTGACAATGCAATTAAAAACTACTGGAATGGCGCATTCAAGAGGAAAGAAGATTCATACTCTGCCAATGGTAATGAGTGGGACATGCATCCTGATATCTGTATTGATGAACTAAGATCAGATTTTGTAGGGGTTAAAACAGTCAGACAGAAGTTTGATAATGCTTGTTCTACAGAGTTGACTCTTGGAAGGTCATATGGTTCAGAAGGAAAATCTGTGAAATCACAGAAATGCAGGTCTTCAAAAACAGGGCCAAGTGGTTTAATCAATTTGCACACTACGGCAGAGTCTGATGATAGCATTGTTGCTACTCCTCTTGGTGTCAAAAGTGGATCTTGCAAACAAATTGCTGATCATACAGGCGAATATCGCCCTTTTCCAAACTCTCCATTGGTTTTCATGGATTCATCCACTTCTACCAACTCAAACTGTACTCCTCCAAAGATTCCACTTTGCTATTCAACTCCACCCAACAGTGTGCAGAATGTCTATGCTAGCAGCACTAGTCCAAAATCTAGATTGAAGAGCTTAGCAAGGACTTTCAAAAATACTCCTTCCATCATAAGAAAGAGAGCTTCCAGAACCGCAGATCATGCCAACTTTTCTGGTGCCAGCTGCTCAACTGCATTGAACATCCTGAGTCTTGATGAAGCAGCTTTCAATAGCAGAGATTCCAACTCTTCAGACTATGTCAGAGGTTTATCTTCAATGCGGCATAGACCCGAAACTTCAGATGCTTATAAATCTCTTGGGAGGTGCCTGGAACATGAATTTTACGATGAAAATGACTCGGGTATCGCTAACTGTGGCAAAGTAGTCTCTGCATATGTTGGTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04151 ko05166 map04151 map05166

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

469

Amino Acids

52.65

Weight (kDa)

8.78

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	56 - 100	6.9e-15	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	57 - 114	2e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	106 - 152	5.5e-19	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	109 - 166	7e-18	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	158 - 200	4e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	161 - 211	2.9e-11	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004605)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13960 AT2G13960 AT2G13960 AT3G09370 AT3G09370 AT3G09370
fragaria_vesca	FvH4_5g01790
malus_domestica	MD04G1064500.v1.1 MD08G1117700.v1.1
prunus_persica	Prupe.5G093400_v2.0.a1 Prupe.5G093400_v2.0.a1
pyrus_communis	pycom04g05830
rosa_chinensis	RchiOBHm_Chr7g0198881
rosa_laevigata	RLG00000003835 RLG00000003838
rosa_multiflora	Rmu_sc0016854.1_g000006
rosa_roxburghii	Rroxscaffold_3G00257330 Rroxscaffold_3G00257350
rosa_rugosa	Rorug07G0050200 Rorug07G0050300 Rorug07G0050400
rosa_samantha	Rh4BG081200 Rh4DG076200 Rh7AG173800 Rh7AG174200 Rh7BG177200 Rh7CG183300 Rh7DG176500 Rh7DG176700
rosa_wichuraiana	Rw7G015220 Rw7G015250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1311
Acc36I	ACCTGC	2 cut(s)	236, 795
AccB1I	GGYRCC	2 cut(s)	1178, 1326
AciI	CCGC	3 cut(s)	35, 1155, 1282
AclWI	GGATC	1 cut(s)	910
AcoI	YGGCCR	2 cut(s)	74, 256
AcsI	RAATTY	3 cut(s)	56, 501, 1340
AcuI	CTGAAG	3 cut(s)	105, 1236, 1284
AfaI	GTAC	2 cut(s)	446, 1003
AhlI	ACTAGT	1 cut(s)	1073
AjnI	CCWGG	5 cut(s)	149, 253, 409, 562, 1329
AluBI	AGCT	6 cut(s)	202, 242, 1098, 1145, 1185, 1226
AluI	AGCT	6 cut(s)	202, 242, 1098, 1145, 1185, 1226
Alw26I	GTCTC	1 cut(s)	1393
AlwI	GGATC	1 cut(s)	910
AlwNI	CAGNNNCTG	2 cut(s)	277, 860
Ama87I	CYCGRG	1 cut(s)	1360
AoxI	GGCC	3 cut(s)	74, 256, 821
ApeKI	GCWGC	4 cut(s)	242, 1068, 1185, 1223
ApoI	RAATTY	3 cut(s)	56, 501, 1340
ArsI	GACNNNNNNTTYG	2 cut(s)	41, 73
Asp700I	GAANNNNTTC	1 cut(s)	501
AspLEI	GCGC	1 cut(s)	605
AspS9I	GGNCC	2 cut(s)	143, 821
AsuC2I	CCSGG	1 cut(s)	461
AsuHPI	GGTGA	1 cut(s)	16
AsuNHI	GCTAGC	1 cut(s)	1064
AvaI	CYCGRG	1 cut(s)	1360
AvaII	GGWCC	1 cut(s)	143
BaeI	ACNNNNGTAYC	2 cut(s)	1348, 1381
BalI	TGGCCA	1 cut(s)	76
BanI	GGYRCC	2 cut(s)	1178, 1326
BbsI	GAAGAC	1 cut(s)	801
BbvI	GCAGC	4 cut(s)	229, 1080, 1172, 1235
BccI	CCATC	3 cut(s)	212, 378, 1136
BceAI	ACGGC	2 cut(s)	243, 867
BciT130I	CCWGG	5 cut(s)	151, 255, 411, 564, 1331
BciVI	GTATCC	2 cut(s)	260, 314
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	1 cut(s)	461
BcoDI	GTCTC	1 cut(s)	1393
BcuI	ACTAGT	1 cut(s)	1073
BfaI	CTAG	4 cut(s)	378, 1065, 1074, 1086
BfmI	CTRYAG	2 cut(s)	243, 741
BfuAI	ACCTGC	2 cut(s)	236, 795
BfuI	GTATCC	2 cut(s)	260, 314
BisI	GCNGC	5 cut(s)	243, 1069, 1186, 1224, 1283
BlpI	GCTNAGC	1 cut(s)	1099
BlsI	GCNGC	5 cut(s)	244, 1070, 1187, 1225, 1284
Bme1390I	CCNGG	6 cut(s)	151, 255, 411, 461, 564, 1331
Bme18I	GGWCC	1 cut(s)	143
BmeT110I	CYCGRG	1 cut(s)	1360
BmgT120I	GGNCC	2 cut(s)	143, 821
BmiI	GGNNCC	3 cut(s)	114, 1180, 1328
BmrFI	CCNGG	6 cut(s)	151, 255, 411, 461, 564, 1331
BmsI	GCATC	5 cut(s)	155, 289, 466, 667, 1294
BmtI	GCTAGC	1 cut(s)	1068
BpiI	GAAGAC	1 cut(s)	801
Bpu1102I	GCTNAGC	1 cut(s)	1099
BpuMI	CCSGG	1 cut(s)	461
BsaJI	CCNNGG	1 cut(s)	253
Bse1I	ACTGG	4 cut(s)	138, 329, 363, 599
Bse3DI	GCAATG	2 cut(s)	393, 434
BseBI	CCWGG	5 cut(s)	151, 255, 411, 564, 1331
BseDI	CCNNGG	1 cut(s)	253
BseGI	GGATG	3 cut(s)	658, 977, 1203
BseMI	GCAATG	2 cut(s)	393, 434
BseMII	CTCAG	1 cut(s)	1199
BseNI	ACTGG	4 cut(s)	138, 329, 363, 599
BseRI	GAGGAG	3 cut(s)	44, 873, 996
BseXI	GCAGC	4 cut(s)	229, 1080, 1172, 1235
BsgI	GTGCAG	1 cut(s)	1070
BshFI	GGCC	3 cut(s)	76, 258, 823
BshNI	GGYRCC	2 cut(s)	1178, 1326
BsiHKCI	CYCGRG	1 cut(s)	1360
BsiSI	CCGG	1 cut(s)	461
BslFI	GGGAC	1 cut(s)	665
BsmAI	GTCTC	1 cut(s)	1393
BsmFI	GGGAC	1 cut(s)	665
BsmI	GAATGC	2 cut(s)	43, 605
BsnI	GGCC	3 cut(s)	76, 258, 823
BsoBI	CYCGRG	1 cut(s)	1360
Bsp143I	GATC	5 cut(s)	155, 686, 902, 922, 1159
Bsp1720I	GCTNAGC	1 cut(s)	1099
BspACI	CCGC	3 cut(s)	35, 1155, 1282
BspANI	GGCC	3 cut(s)	76, 258, 823
BspCNI	CTCAG	1 cut(s)	1200
BspLI	GGNNCC	3 cut(s)	114, 1180, 1328
BspMAI	CTGCAG	1 cut(s)	247
BspMI	ACCTGC	2 cut(s)	236, 795
BspOI	GCTAGC	1 cut(s)	1068
BspPI	GGATC	1 cut(s)	910
BspQI	GCTCTTC	1 cut(s)	1088
BspT107I	GGYRCC	2 cut(s)	1178, 1326
BsrDI	GCAATG	2 cut(s)	393, 434
BsrI	ACTGG	4 cut(s)	138, 329, 363, 599
BssECI	CCNNGG	1 cut(s)	253
BssMI	GATC	5 cut(s)	155, 686, 902, 922, 1159
Bst2UI	CCWGG	5 cut(s)	151, 255, 411, 564, 1331
Bst4CI	ACNGT	5 cut(s)	525, 712, 1001, 1046, 1376
Bst6I	CTCTTC	3 cut(s)	486, 1088, 1255
BstAPI	GCANNNNNTGC	2 cut(s)	429, 1163
BstC8I	GCNNGC	5 cut(s)	278, 287, 425, 1066, 1183
BstDEI	CTNAG	4 cut(s)	125, 683, 1099, 1208
BstF5I	GGATG	3 cut(s)	658, 977, 1203
BstHHI	GCGC	1 cut(s)	605
BstKTI	GATC	5 cut(s)	158, 689, 905, 925, 1162
BstMAI	GTCTC	1 cut(s)	1393
BstMBI	GATC	5 cut(s)	155, 686, 902, 922, 1159
BstMWI	GCNNNNNNNGC	6 cut(s)	282, 286, 429, 548, 939, 1163
BstNI	CCWGG	5 cut(s)	151, 255, 411, 564, 1331
BstNSI	RCATGY	1 cut(s)	658
BstSCI	CCNGG	6 cut(s)	149, 253, 409, 459, 562, 1329
BstSFI	CTRYAG	2 cut(s)	243, 741
BstV1I	GCAGC	4 cut(s)	229, 1080, 1172, 1235
BstV2I	GAAGAC	1 cut(s)	801
BstX2I	RGATCY	1 cut(s)	902
BstXI	CCANNNNNNTGG	1 cut(s)	527
BstYI	RGATCY	1 cut(s)	902
BsuI	GTATCC	2 cut(s)	260, 314
BsuRI	GGCC	3 cut(s)	76, 258, 823
BtgZI	GCGATG	1 cut(s)	266
BtsCI	GGATG	3 cut(s)	658, 977, 1203
BtsIMutI	CAGTG	3 cut(s)	145, 278, 1051
BveI	ACCTGC	2 cut(s)	236, 795
Cac8I	GCNNGC	5 cut(s)	278, 287, 425, 1066, 1183
CaiI	CAGNNNCTG	2 cut(s)	277, 860
CfoI	GCGC	1 cut(s)	605
Cfr13I	GGNCC	2 cut(s)	143, 821
CsiI	ACCWGGT	1 cut(s)	409
Csp6I	GTAC	2 cut(s)	445, 1002
CviAII	CATG	5 cut(s)	480, 655, 970, 1163, 1337
CviQI	GTAC	2 cut(s)	445, 1002
DdeI	CTNAG	4 cut(s)	125, 683, 1099, 1208
DpnI	GATC	5 cut(s)	157, 688, 904, 924, 1161
DpnII	GATC	5 cut(s)	155, 686, 902, 922, 1159
EaeI	YGGCCR	2 cut(s)	74, 256
Eam1104I	CTCTTC	3 cut(s)	486, 1088, 1255
EarI	CTCTTC	3 cut(s)	486, 1088, 1255
Eco32I	GATATC	1 cut(s)	667
Eco47I	GGWCC	1 cut(s)	143
Eco57I	CTGAAG	3 cut(s)	105, 1236, 1284
Eco88I	CYCGRG	1 cut(s)	1360
EcoRI	GAATTC	1 cut(s)	501
EcoRII	CCWGG	5 cut(s)	149, 253, 409, 562, 1329
EcoRV	GATATC	1 cut(s)	667
EcoT22I	ATGCAT	2 cut(s)	481, 660
FaeI	CATG	5 cut(s)	483, 658, 973, 1166, 1340
FalI	AAGNNNNNCTT	2 cut(s)	889, 921
FaqI	GGGAC	1 cut(s)	665
FatI	CATG	5 cut(s)	479, 654, 969, 1162, 1336
FauNDI	CATATG	2 cut(s)	766, 1396
FbaI	TGATCA	1 cut(s)	922
Fnu4HI	GCNGC	5 cut(s)	243, 1069, 1186, 1224, 1283
FokI	GGATG	3 cut(s)	645, 964, 1190
Fsp4HI	GCNGC	5 cut(s)	243, 1069, 1186, 1224, 1283
FspBI	CTAG	4 cut(s)	378, 1065, 1074, 1086
GlaI	GCGC	1 cut(s)	604
GluI	GCNGC	5 cut(s)	243, 1069, 1186, 1224, 1283
HaeIII	GGCC	3 cut(s)	76, 258, 823
HapII	CCGG	1 cut(s)	461
HhaI	GCGC	1 cut(s)	605
Hin1II	CATG	5 cut(s)	483, 658, 973, 1166, 1340
Hin6I	GCGC	1 cut(s)	603
HinP1I	GCGC	1 cut(s)	603
HincII	GTYRAC	1 cut(s)	750
HindII	GTYRAC	1 cut(s)	750
HpaII	CCGG	1 cut(s)	461
HphI	GGTGA	1 cut(s)	16
Hpy166II	GTNNAC	1 cut(s)	750
Hpy188III	TCNNGA	8 cut(s)	162, 305, 610, 662, 1086, 1149, 1207, 1214
Hpy8I	GTNNAC	1 cut(s)	750
HpyAV	CCTTC	6 cut(s)	9, 80, 561, 753, 770, 1134
HpyCH4III	ACNGT	5 cut(s)	525, 712, 1001, 1046, 1376
HpyF10VI	GCNNNNNNNGC	6 cut(s)	282, 286, 429, 548, 939, 1163
HpyF3I	CTNAG	4 cut(s)	125, 683, 1099, 1208
Hsp92II	CATG	5 cut(s)	483, 658, 973, 1166, 1340
HspAI	GCGC	1 cut(s)	603
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	5 cut(s)	155, 686, 902, 922, 1159
LguI	GCTCTTC	1 cut(s)	1088
LmnI	GCTCC	1 cut(s)	112
Lsp1109I	GCAGC	4 cut(s)	229, 1080, 1172, 1235
LweI	GCATC	5 cut(s)	155, 289, 466, 667, 1294
MabI	ACCWGGT	1 cut(s)	409
MaeI	CTAG	4 cut(s)	378, 1065, 1074, 1086
MaeIII	GTNAC	2 cut(s)	95, 530
MalI	GATC	5 cut(s)	157, 688, 904, 924, 1161
MboI	GATC	5 cut(s)	155, 686, 902, 922, 1159
MboII	GAAGA	9 cut(s)	350, 393, 500, 503, 632, 801, 1105, 1242, 1266
MfeI	CAATTG	1 cut(s)	91
MflI	RGATCY	1 cut(s)	902
MlsI	TGGCCA	1 cut(s)	76
MluCI	AATT	9 cut(s)	56, 91, 226, 367, 501, 582, 838, 915, 1340
MluNI	TGGCCA	1 cut(s)	76
MlyI	GAGTC	6 cut(s)	77, 92, 745, 866, 1219, 1352
MmeI	TCCRAC	3 cut(s)	110, 170, 1269
Mox20I	TGGCCA	1 cut(s)	76
Mph1103I	ATGCAT	2 cut(s)	481, 660
MroXI	GAANNNNTTC	1 cut(s)	501
MscI	TGGCCA	1 cut(s)	76
MseI	TTAA	4 cut(s)	455, 585, 705, 833
MslI	CAYNNNNRTG	2 cut(s)	163, 799
Msp20I	TGGCCA	1 cut(s)	76
MspA1I	CMGCKG	1 cut(s)	1185
MspI	CCGG	1 cut(s)	461
MspR9I	CCNGG	6 cut(s)	151, 255, 411, 461, 564, 1331
MunI	CAATTG	1 cut(s)	91
Mva1269I	GAATGC	2 cut(s)	43, 605
MvaI	CCWGG	5 cut(s)	151, 255, 411, 564, 1331
MwoI	GCNNNNNNNGC	6 cut(s)	282, 286, 429, 548, 939, 1163
NciI	CCSGG	1 cut(s)	461
NdeI	CATATG	2 cut(s)	766, 1396
NdeII	GATC	5 cut(s)	155, 686, 902, 922, 1159
NheI	GCTAGC	1 cut(s)	1064
NlaIII	CATG	5 cut(s)	483, 658, 973, 1166, 1340
NlaIV	GGNNCC	3 cut(s)	114, 1180, 1328
NmuCI	GTSAC	1 cut(s)	95
NsiI	ATGCAT	2 cut(s)	481, 660
NspI	RCATGY	1 cut(s)	658
PciSI	GCTCTTC	1 cut(s)	1088
PctI	GAATGC	2 cut(s)	43, 605
PdmI	GAANNNNTTC	1 cut(s)	501
PfeI	GAWTC	5 cut(s)	301, 623, 974, 1015, 1241
PflFI	GACNNNGTC	1 cut(s)	1259
PkrI	GCNGC	5 cut(s)	244, 1070, 1187, 1225, 1284
PleI	GAGTC	6 cut(s)	76, 92, 745, 865, 1218, 1352
PpsI	GAGTC	6 cut(s)	76, 92, 745, 865, 1218, 1352
PsiI	TTATAA	1 cut(s)	1311
Psp6I	CCWGG	5 cut(s)	149, 253, 409, 562, 1329
PspGI	CCWGG	5 cut(s)	149, 253, 409, 562, 1329
PspN4I	GGNNCC	3 cut(s)	114, 1180, 1328
PspPI	GGNCC	2 cut(s)	143, 821
PstI	CTGCAG	1 cut(s)	247
PstNI	CAGNNNCTG	2 cut(s)	277, 860
PsuI	RGATCY	1 cut(s)	902
PsyI	GACNNNGTC	1 cut(s)	1259
PvuII	CAGCTG	1 cut(s)	1185
RsaI	GTAC	2 cut(s)	446, 1003
RsaNI	GTAC	2 cut(s)	445, 1002
RseI	CAYNNNNRTG	2 cut(s)	163, 799
SapI	GCTCTTC	1 cut(s)	1088
SaqAI	TTAA	4 cut(s)	455, 585, 705, 833
SatI	GCNGC	5 cut(s)	243, 1069, 1186, 1224, 1283
Sau3AI	GATC	5 cut(s)	155, 686, 902, 922, 1159
Sau96I	GGNCC	2 cut(s)	143, 821
SchI	GAGTC	6 cut(s)	77, 92, 745, 866, 1219, 1352
ScrFI	CCNGG	6 cut(s)	151, 255, 411, 461, 564, 1331
SexAI	ACCWGGT	1 cut(s)	409
SfaNI	GCATC	5 cut(s)	155, 289, 466, 667, 1294
SfcI	CTRYAG	2 cut(s)	243, 741
SinI	GGWCC	1 cut(s)	143
SmiMI	CAYNNNNRTG	2 cut(s)	163, 799
SpeI	ACTAGT	1 cut(s)	1073
Sse9I	AATT	9 cut(s)	56, 91, 226, 367, 501, 582, 838, 915, 1340
SsiI	CCGC	3 cut(s)	35, 1155, 1282
SspMI	CTAG	4 cut(s)	378, 1065, 1074, 1086
StyD4I	CCNGG	6 cut(s)	149, 253, 409, 459, 562, 1329
TaaI	ACNGT	5 cut(s)	525, 712, 1001, 1046, 1376
TaqI	TCGA	2 cut(s)	66, 415
TasI	AATT	9 cut(s)	56, 91, 226, 367, 501, 582, 838, 915, 1340
TatI	WGTACW	1 cut(s)	1001
TauI	GCSGC	1 cut(s)	1285
TfiI	GAWTC	5 cut(s)	301, 623, 974, 1015, 1241
Tru1I	TTAA	4 cut(s)	455, 585, 705, 833
Tru9I	TTAA	4 cut(s)	455, 585, 705, 833
TscAI	CASTG	3 cut(s)	145, 278, 1051
TseFI	GTSAC	1 cut(s)	95
TseI	GCWGC	4 cut(s)	242, 1068, 1185, 1223
Tsp45I	GTSAC	1 cut(s)	95
TspDTI	ATGAA	7 cut(s)	615, 693, 958, 966, 1233, 1353, 1365
TspRI	CASTG	3 cut(s)	145, 278, 1051
Tth111I	GACNNNGTC	1 cut(s)	1259
VpaK11BI	GGWCC	1 cut(s)	143
XapI	RAATTY	3 cut(s)	56, 501, 1340
XbaI	TCTAGA	1 cut(s)	1085
XceI	RCATGY	1 cut(s)	658
XcmI	CCANNNNNNNNNTGG	1 cut(s)	524
XmnI	GAANNNNTTC	1 cut(s)	501
XspI	CTAG	4 cut(s)	378, 1065, 1074, 1086
Zsp2I	ATGCAT	2 cut(s)	481, 660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.