Rorug07G0080600
MYB Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0012831
Physical Location & Seq
Reverse (-)
6301653 .. 6304074
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0080600.1

Sequence Viewer

Length: 1602 bp
ATGTTGGTAGGATGTGATCTTATGGGATATATTGATGGAACTATTCCTTGTCCTCCACAATACAAAGTCATAGAAGAGGGTAGTCTTACCTCAGAGCTTACACAAGAGTATAAGACTTGGAGGAAGAATGACTCTGCTTTAATGACATTAATAGCTGGTACTTTGTCTCCTAATGCTCTTTCTTTTATTGTTGGGAGCAAAACCTCAAAAGAAGTTTGGTTTTCGCTTTATGAGAGGTATGCTAAACTTTCAAAGTTCAAAGCTTTCGAGCTCCAGACCTCATTGCAGAAATTTCAGAAAGGTAAAGATAGTATTGACAAGTATATGGAACGTTTTAAAACTGTTCGGGACCAACTGTCTGTTGCTGGAGTTCTCATCCCTGATGAAGATATAGTGTTTCTGATCCTAAATGGATTGCCTGTTGACTTTGCAACCATAAAGACTATCATCAGAGCTCGAGAGACGCCAATTTCTCTAAGCGAGCTTCGCACATTATTGTTGGATGTTGAGTCTGATATTGTTCAAGAATCAAGATCATTTCCTCCTGCTCCCATGACTGCAGTTGTTGTCAATCCTGAGAACCATACAAGATCTGATGCAGGGCAGTGTTTCGAATATTCTCCTGGTACACATCTTGCTACTCAAGTTTCTCCAATTACTCAGTTTACTTGTGTACCTCAACAGACTGTCATGCCTAATAGTACCAACTATGTTACTGCATTTATTTTTGGGCTACCCCTTATGTCAAGTAATGATCATATGGTGACATCCACTCCCAATGCATCTGTTGGTTCCATTTTTTATCCTCTTGGTTCACATGAATCTGTTGGCTCCATTGTTTATCCTCTTGGTTCAAATGTTGTTCCAACAAGTGAAGTTCTTTACAACGGTGGAATTTCTCAGCCAAAAACTGGTCTTATTCAGCAAAATGGTACACATCCTTCTCCTCAAGTTGCTCAGCAAGCTAGTGTCAGATTTGCTTCAAGAGGGGTCATAGTGCAGCAGAGTGTTTTCATCGGCATCACTATGGTTTACAATCACCATCTTCTGCACAATTTCAAGCTAAGGCTACTTCTGTCTCTTCTCAACCAAGCTTTCGATAGAGAGAAAATCAAGACTTTCTTTGATGATCGTACACTCAAGAGAGGAGAAAACATATCAGCAGCACTTCTTCGTGGAATAGAAGTTTCAAAGATTTATGTGGTTATATGCTCTGAAAACTACGCTTCGTCAAGTTGGTGCTTGGATGAACTTGTTAAGATCCTTGAATGTCAAAAATCAAAGCAGCAGATTGTTATCCTAGTTTTTTACAAAGTGGATCCTGCACATGTACGACATCAAACTGGTAGTTTTGGTCAAGCCCTTGCCGGGTTGAAATACAACAAGGACAGGGTCCCCATATGGAGGGCAGCTCTTACACAAGTAGCAAATTTGTCTGGATGGACTTATGTGGACGGGTATGAATCTGATTTTATCGAGAAGATTGTTAGAGAGATATTAGATGTTGTCGGCCTCAACGACCAAAAGACGAAAGAAGATGAAAGCTGTTGTAGAGAATTGGAAAAATTGTATTGTATTCATCTCACCATGAGGTTTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000976 GO:0001067 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0007275 GO:0007568 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010035 GO:0010038 GO:0010150 GO:0010252 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022622 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0033993 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044092 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045927 GO:0045934 GO:0046677 GO:0046686 GO:0048364 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051341 GO:0051354 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0080090 GO:0090693 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0097305 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1990837 GO:2000112 GO:2000113 GO:2000468 GO:2000469 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

533

Amino Acids

59.64

Weight (kDa)

6.61

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 25 - 173 1.7e-21 gag-polypeptide of LTR copia-type
TIR PF01582 358 - 511 4.6e-46 TIR domain
TIR_2 PF13676 362 - 441 9.7e-11 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012831)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47390
fragaria_vesca FvH4_5g19500
malus_domestica MD00G1169600.v1.1 MD06G1054100.v1.1
prunus_persica Prupe.5G064900_v2.0.a1
pyrus_communis pycom04g05450 pycom06g04550
rosa_chinensis RchiOBHm_Chr7g0204081
rosa_laevigata RLG00000003489
rosa_roxburghii Rroxscaffold_3G00253370
rosa_rugosa Rorug07G0080500 Rorug07G0080600 Rorug07G0080700
rosa_samantha Rh7AG210500 Rh7BG209100 Rh7CG222900 Rh7DG217200
rosa_wichuraiana Rw7G018330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 911
AclI AACGTT 1 cut(s) 331
AclWI GGATC 4 cut(s) 397, 1255, 1313, 1326
AcsI RAATTY 3 cut(s) 290, 894, 1429
AcyI GRCGYC 1 cut(s) 464
AfaI GTAC 7 cut(s) 160, 628, 675, 703, 934, 1135, 1332
AfiI CCNNNNNNNGG 3 cut(s) 911, 1368, 1404
AflIII ACRYGT 1 cut(s) 1327
AgsI TTSAA 9 cut(s) 252, 259, 524, 855, 984, 1060, 1191, 1268, 1375
AhdI GACNNNNNGTC 1 cut(s) 355
AjnI CCWGG 1 cut(s) 622
Alw21I GWGCWC 2 cut(s) 273, 457
Alw26I GTCTC 3 cut(s) 171, 455, 1083
AlwI GGATC 4 cut(s) 397, 1255, 1313, 1326
Ama87I CYCGRG 1 cut(s) 456
AoxI GGCC 1 cut(s) 1510
ApeKI GCWGC 4 cut(s) 1000, 1163, 1285, 1409
ApoI RAATTY 3 cut(s) 290, 894, 1429
AseI ATTAAT 1 cut(s) 149
AspS9I GGNCC 2 cut(s) 349, 1393
AsuC2I CCSGG 1 cut(s) 1369
AsuHPI GGTGA 3 cut(s) 775, 1031, 1576
AsuII TTCGAA 1 cut(s) 612
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 2 cut(s) 349, 1393
BaeI ACNNNNGTAYC 2 cut(s) 657, 690
BamHI GGATCC 1 cut(s) 1318
BanII GRGCYC 2 cut(s) 273, 457
BarI GAAGNNNNNNTAC 2 cut(s) 925, 957
Bbv12I GWGCWC 2 cut(s) 273, 457
BbvI GCAGC 4 cut(s) 1012, 1175, 1297, 1421
BccI CCATC 3 cut(s) 29, 1050, 1434
BciT130I CCWGG 1 cut(s) 624
BclI TGATCA 1 cut(s) 754
BcnI CCSGG 1 cut(s) 1369
BcoDI GTCTC 3 cut(s) 171, 455, 1083
BfaI CTAG 2 cut(s) 966, 1301
BfmI CTRYAG 1 cut(s) 558
BglII AGATCT 1 cut(s) 590
BisI GCNGC 4 cut(s) 1001, 1164, 1286, 1410
BlpI GCTNAGC 1 cut(s) 957
BlsI GCNGC 4 cut(s) 1002, 1165, 1287, 1411
Bme1390I CCNGG 2 cut(s) 624, 1369
Bme18I GGWCC 2 cut(s) 349, 1393
BmeRI GACNNNNNGTC 1 cut(s) 355
BmeT110I CYCGRG 1 cut(s) 456
BmgT120I GGNCC 2 cut(s) 349, 1393
BmiI GGNNCC 6 cut(s) 350, 793, 832, 1320, 1394, 1395
BmrFI CCNGG 2 cut(s) 624, 1369
BmsI GCATC 3 cut(s) 586, 791, 1029
BplI GAGNNNNNCTC 2 cut(s) 1396, 1428
BpmI CTGGAG 2 cut(s) 257, 387
Bpu10I CCTNAGC 1 cut(s) 1064
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 612
BpuEI CTTGAG 3 cut(s) 627, 933, 1124
BpuMI CCSGG 1 cut(s) 1369
BsaBI GATNNNNATC 1 cut(s) 1295
BsaHI GRCGYC 1 cut(s) 464
BsaXI ACNNNNNCTCC 4 cut(s) 151, 181, 757, 787
Bsc4I CCNNNNNNNGG 3 cut(s) 911, 1368, 1404
Bse1I ACTGG 2 cut(s) 916, 1348
Bse3DI GCAATG 1 cut(s) 281
Bse8I GATNNNNATC 1 cut(s) 1295
BseBI CCWGG 1 cut(s) 624
BseGI GGATG 7 cut(s) 17, 375, 508, 767, 937, 1252, 1445
BseJI GATNNNNATC 1 cut(s) 1295
BseLI CCNNNNNNNGG 3 cut(s) 911, 1368, 1404
BseMI GCAATG 1 cut(s) 281
BseMII CTCAG 5 cut(s) 105, 567, 674, 914, 971
BseNI ACTGG 2 cut(s) 916, 1348
BseRI GAGGAG 2 cut(s) 936, 1161
BseXI GCAGC 4 cut(s) 1012, 1175, 1297, 1421
BsgI GTGCAG 3 cut(s) 1019, 1034, 1308
BshFI GGCC 1 cut(s) 1512
BsiHKAI GWGCWC 2 cut(s) 273, 457
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 1 cut(s) 1368
BslFI GGGAC 2 cut(s) 362, 1379
BslI CCNNNNNNNGG 3 cut(s) 911, 1368, 1404
BsmAI GTCTC 3 cut(s) 171, 455, 1083
BsmBI CGTCTC 1 cut(s) 455
BsmFI GGGAC 2 cut(s) 362, 1379
BsnI GGCC 1 cut(s) 1512
BsoBI CYCGRG 1 cut(s) 456
Bsp119I TTCGAA 1 cut(s) 612
Bsp1286I GDGCHC 2 cut(s) 273, 457
Bsp143I GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
Bsp1720I GCTNAGC 1 cut(s) 957
BspANI GGCC 1 cut(s) 1512
BspCNI CTCAG 5 cut(s) 104, 568, 673, 913, 970
BspLI GGNNCC 6 cut(s) 350, 793, 832, 1320, 1394, 1395
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 4 cut(s) 397, 1255, 1313, 1326
BspT104I TTCGAA 1 cut(s) 612
BsrDI GCAATG 1 cut(s) 281
BsrI ACTGG 2 cut(s) 916, 1348
BssMI GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
BssNI GRCGYC 1 cut(s) 464
Bst2UI CCWGG 1 cut(s) 624
Bst4CI ACNGT 4 cut(s) 343, 357, 688, 890
Bst6I CTCTTC 2 cut(s) 69, 1086
BstACI GRCGYC 1 cut(s) 464
BstBI TTCGAA 1 cut(s) 612
BstC8I GCNNGC 2 cut(s) 482, 963
BstDEI CTNAG 7 cut(s) 91, 476, 576, 660, 900, 957, 1064
BstF5I GGATG 7 cut(s) 17, 375, 508, 767, 937, 1252, 1445
BstKTI GATC 8 cut(s) 19, 405, 536, 593, 757, 1132, 1263, 1321
BstMAI GTCTC 3 cut(s) 171, 455, 1083
BstMBI GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
BstMWI GCNNNNNNNGC 2 cut(s) 486, 962
BstNI CCWGG 1 cut(s) 624
BstNSI RCATGY 1 cut(s) 1331
BstSCI CCNGG 2 cut(s) 622, 1367
BstSFI CTRYAG 1 cut(s) 558
BstV1I GCAGC 4 cut(s) 1012, 1175, 1297, 1421
BstX2I RGATCY 3 cut(s) 590, 1260, 1318
BstYI RGATCY 3 cut(s) 590, 1260, 1318
BsuRI GGCC 1 cut(s) 1512
BtsCI GGATG 7 cut(s) 17, 375, 508, 767, 937, 1252, 1445
BtsI GCAGTG 1 cut(s) 611
BtsIMutI CAGTG 1 cut(s) 611
Cac8I GCNNGC 2 cut(s) 482, 963
Cfr13I GGNCC 2 cut(s) 349, 1393
CseI GACGC 1 cut(s) 472
Csp6I GTAC 7 cut(s) 159, 627, 674, 702, 933, 1134, 1331
CviAII CATG 5 cut(s) 553, 691, 818, 1328, 1588
CviQI GTAC 7 cut(s) 159, 627, 674, 702, 933, 1134, 1331
DdeI CTNAG 7 cut(s) 91, 476, 576, 660, 900, 957, 1064
DpnI GATC 8 cut(s) 18, 404, 535, 592, 756, 1131, 1262, 1320
DpnII GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
DraI TTTAAA 1 cut(s) 337
DriI GACNNNNNGTC 1 cut(s) 355
Eam1104I CTCTTC 2 cut(s) 69, 1086
Eam1105I GACNNNNNGTC 1 cut(s) 355
EarI CTCTTC 2 cut(s) 69, 1086
Ecl136II GAGCTC 2 cut(s) 271, 455
Eco24I GRGCYC 2 cut(s) 273, 457
Eco47I GGWCC 2 cut(s) 349, 1393
Eco53kI GAGCTC 2 cut(s) 271, 455
Eco88I CYCGRG 1 cut(s) 456
EcoICRI GAGCTC 2 cut(s) 271, 455
EcoO109I RGGNCCY 1 cut(s) 1393
EcoRII CCWGG 1 cut(s) 622
EcoT22I ATGCAT 1 cut(s) 784
EcoT38I GRGCYC 2 cut(s) 273, 457
Esp3I CGTCTC 1 cut(s) 455
FaeI CATG 5 cut(s) 556, 694, 821, 1331, 1591
FalI AAGNNNNNCTT 2 cut(s) 1106, 1138
FaqI GGGAC 2 cut(s) 362, 1379
FatI CATG 5 cut(s) 552, 690, 817, 1327, 1587
FauNDI CATATG 2 cut(s) 759, 1400
FbaI TGATCA 1 cut(s) 754
Fnu4HI GCNGC 4 cut(s) 1001, 1164, 1286, 1410
FokI GGATG 7 cut(s) 24, 362, 515, 754, 924, 1259, 1452
FriOI GRGCYC 2 cut(s) 273, 457
Fsp4HI GCNGC 4 cut(s) 1001, 1164, 1286, 1410
FspBI CTAG 2 cut(s) 966, 1301
GluI GCNGC 4 cut(s) 1001, 1164, 1286, 1410
GsuI CTGGAG 2 cut(s) 257, 387
HaeIII GGCC 1 cut(s) 1512
HapII CCGG 1 cut(s) 1368
HgaI GACGC 1 cut(s) 472
Hin1I GRCGYC 1 cut(s) 464
Hin1II CATG 5 cut(s) 556, 694, 821, 1331, 1591
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HindIII AAGCTT 2 cut(s) 261, 1092
HinfI GANTC 5 cut(s) 131, 509, 527, 821, 1463
HpaII CCGG 1 cut(s) 1368
HphI GGTGA 3 cut(s) 775, 1031, 1576
Hpy166II GTNNAC 9 cut(s) 424, 629, 666, 674, 815, 935, 1033, 1136, 1453
Hpy188I TCNGA 9 cut(s) 94, 297, 402, 452, 514, 595, 974, 1216, 1468
Hpy8I GTNNAC 9 cut(s) 424, 629, 666, 674, 815, 935, 1033, 1136, 1453
HpyAV CCTTC 1 cut(s) 951
HpyCH4III ACNGT 4 cut(s) 343, 357, 688, 890
HpyCH4IV ACGT 1 cut(s) 331
HpyCH4V TGCA 9 cut(s) 286, 431, 560, 599, 719, 782, 1000, 1051, 1325
HpyF10VI GCNNNNNNNGC 2 cut(s) 486, 962
HpyF3I CTNAG 7 cut(s) 91, 476, 576, 660, 900, 957, 1064
HpySE526I ACGT 1 cut(s) 331
Hsp92I GRCGYC 1 cut(s) 464
Hsp92II CATG 5 cut(s) 556, 694, 821, 1331, 1591
KflI GGGWCCC 1 cut(s) 1393
Ksp22I TGATCA 1 cut(s) 754
Kzo9I GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
LmnI GCTCC 4 cut(s) 195, 276, 553, 836
Lsp1109I GCAGC 4 cut(s) 1012, 1175, 1297, 1421
LweI GCATC 3 cut(s) 586, 791, 1029
MaeI CTAG 2 cut(s) 966, 1301
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 2 cut(s) 712, 763
MalI GATC 8 cut(s) 18, 404, 535, 592, 756, 1131, 1262, 1320
MboI GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
MboII GAAGA 8 cut(s) 86, 136, 398, 1037, 1073, 1163, 1492, 1547
MflI RGATCY 3 cut(s) 590, 1260, 1318
MhlI GDGCHC 2 cut(s) 273, 457
MluCI AATT 8 cut(s) 290, 468, 654, 894, 1054, 1429, 1556, 1565
MlyI GAGTC 2 cut(s) 125, 518
MmeI TCCRAC 2 cut(s) 480, 890
Mph1103I ATGCAT 1 cut(s) 784
MseI TTAA 4 cut(s) 140, 149, 336, 1257
MslI CAYNNNNRTG 1 cut(s) 1025
MspI CCGG 1 cut(s) 1368
MspR9I CCNGG 2 cut(s) 624, 1369
MvaI CCWGG 1 cut(s) 624
MwoI GCNNNNNNNGC 2 cut(s) 486, 962
NciI CCSGG 1 cut(s) 1369
NdeI CATATG 2 cut(s) 759, 1400
NdeII GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
NlaIII CATG 5 cut(s) 556, 694, 821, 1331, 1591
NlaIV GGNNCC 6 cut(s) 350, 793, 832, 1320, 1394, 1395
NmuCI GTSAC 1 cut(s) 763
NsiI ATGCAT 1 cut(s) 784
NspI RCATGY 1 cut(s) 1331
NspV TTCGAA 1 cut(s) 612
PaeR7I CTCGAG 1 cut(s) 456
PciI ACATGT 1 cut(s) 1327
PcsI WCGNNNNNNNCGW 1 cut(s) 1515
PfeI GAWTC 3 cut(s) 527, 821, 1463
PflFI GACNNNGTC 1 cut(s) 1391
PflMI CCANNNNNTGG 1 cut(s) 911
PkrI GCNGC 4 cut(s) 1002, 1165, 1287, 1411
PleI GAGTC 2 cut(s) 125, 517
PpsI GAGTC 2 cut(s) 125, 517
PpuMI RGGWCCY 1 cut(s) 1393
PscI ACATGT 1 cut(s) 1327
PshBI ATTAAT 1 cut(s) 149
Psp124BI GAGCTC 2 cut(s) 273, 457
Psp1406I AACGTT 1 cut(s) 331
Psp5II RGGWCCY 1 cut(s) 1393
Psp6I CCWGG 1 cut(s) 622
PspGI CCWGG 1 cut(s) 622
PspN4I GGNNCC 6 cut(s) 350, 793, 832, 1320, 1394, 1395
PspPI GGNCC 2 cut(s) 349, 1393
PspPPI RGGWCCY 1 cut(s) 1393
PstI CTGCAG 1 cut(s) 562
PsuI RGATCY 3 cut(s) 590, 1260, 1318
PsyI GACNNNGTC 1 cut(s) 1391
RsaI GTAC 7 cut(s) 160, 628, 675, 703, 934, 1135, 1332
RsaNI GTAC 7 cut(s) 159, 627, 674, 702, 933, 1134, 1331
RseI CAYNNNNRTG 1 cut(s) 1025
SacI GAGCTC 2 cut(s) 273, 457
SaqAI TTAA 4 cut(s) 140, 149, 336, 1257
SatI GCNGC 4 cut(s) 1001, 1164, 1286, 1410
Sau3AI GATC 8 cut(s) 16, 402, 533, 590, 754, 1129, 1260, 1318
Sau96I GGNCC 2 cut(s) 349, 1393
SchI GAGTC 2 cut(s) 125, 518
ScrFI CCNGG 2 cut(s) 624, 1369
SduI GDGCHC 2 cut(s) 273, 457
SfaNI GCATC 3 cut(s) 586, 791, 1029
SfcI CTRYAG 1 cut(s) 558
Sfr274I CTCGAG 1 cut(s) 456
SfuI TTCGAA 1 cut(s) 612
SinI GGWCC 2 cut(s) 349, 1393
SlaI CTCGAG 1 cut(s) 456
SmiMI CAYNNNNRTG 1 cut(s) 1025
SmlI CTYRAG 4 cut(s) 456, 642, 948, 1139
SmoI CTYRAG 4 cut(s) 456, 642, 948, 1139
Sse9I AATT 8 cut(s) 290, 468, 654, 894, 1054, 1429, 1556, 1565
SspI AATATT 1 cut(s) 617
SspMI CTAG 2 cut(s) 966, 1301
SstI GAGCTC 2 cut(s) 273, 457
StyD4I CCNGG 2 cut(s) 622, 1367
TaaI ACNGT 4 cut(s) 343, 357, 688, 890
TaiI ACGT 1 cut(s) 334
TaqI TCGA 5 cut(s) 267, 457, 612, 1098, 1476
TasI AATT 8 cut(s) 290, 468, 654, 894, 1054, 1429, 1556, 1565
TfiI GAWTC 3 cut(s) 527, 821, 1463
Tru1I TTAA 4 cut(s) 140, 149, 336, 1257
Tru9I TTAA 4 cut(s) 140, 149, 336, 1257
TscAI CASTG 1 cut(s) 611
TseFI GTSAC 1 cut(s) 763
TseI GCWGC 4 cut(s) 1000, 1163, 1285, 1409
Tsp45I GTSAC 1 cut(s) 763
TspDTI ATGAA 7 cut(s) 399, 834, 1003, 1263, 1476, 1554, 1568
TspRI CASTG 1 cut(s) 611
Tth111I GACNNNGTC 1 cut(s) 1391
Van91I CCANNNNNTGG 1 cut(s) 911
VpaK11BI GGWCC 2 cut(s) 349, 1393
VspI ATTAAT 1 cut(s) 149
XapI RAATTY 3 cut(s) 290, 894, 1429
XceI RCATGY 1 cut(s) 1331
XhoI CTCGAG 1 cut(s) 456
XspI CTAG 2 cut(s) 966, 1301
Zsp2I ATGCAT 1 cut(s) 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.