Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013967

Physical Location & Seq

Genomic Coordinates Reverse (-)

34864770 .. 34865940

Gene Structure 1171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G391200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGAACCAACCAGGAATTATGAAACATATATCATCTCTGCTCCAGAGGCTCCTCCATGTCCAAACACACCACTTCAGGACCCCAAAGAGAGCAAACAGAAACTAGTTGAGGAAGATGAAGAGGAAGCTAATAAAGATCAAGAAAAAGAGATGAAGCCCAATATTTTAGTAGATCTTGAGGATTCAAATGGTGGGTTCAATCCAGAACTCAACCTCATTGATTGCCTGGACATGGGTTCATCAGAAGGTACAGCTGCTCCTAGGTCTGATGGGGCAGAGCCTAGAGTTTTCTCATGCAACTACTGTCAAAGAAAATTCTACAGCTCACAGGCACTTGGAGGGCACCAAAATGCCCACAAAAGAGAGAGGACCCTAGCAAAGAGAGGACAGAGGATGTTAGGGACACATGTAATGGCCTCAGCAGCTGCAGGTTTTGGGTACCCTTACTTGCATCATCACCATCACCACCATATTTCAAGCTTGGCTTCTCTGCCTCTCCATGGCGCTGCTTATAATCACAAAACTTTGGACATTCAGGCGCACTCAATGATTCACAAGCCTAATTCTCACATGGCATCATCTTCTATTGGGTTCGGAAGTTCGTATGGAAATCGCGGCTACAGGTCAAGACCGCTCATTGATCAACAACCAGCAATTGGGAAGCTAGCCGCAGCAGCAGCAGAGAATTTCCAAACGACGGGTAGAGGCGGTGCTGGTAGATTTGACATGGGAAAGAACAAGATGGGTTCCCAAGCCAATGACGAAATTGGTAAATTCTGGTTGGCAAACGGCAGTCGTTTCAAGAGTGATCAGGAGGAAATGAAGAAGCTTGACTTGTCCCTCAAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009787 GO:0009788 GO:0009889 GO:0009966 GO:0009968 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0023051 GO:0023057 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901420 GO:1903506 GO:1905957 GO:1905958 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

284

Amino Acids

31.2

Weight (kDa)

6.95

Isoelectric Point (pI)

47.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013967)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10970 AT5G25160
fragaria_vesca	FvH4_2g40850
malus_domestica	MD08G1059200.v1.1 MD15G1037200.v1.1
prunus_persica	Prupe.1G391200_v2.0.a1
pyrus_communis	pycom08g04930
rosa_chinensis	RchiOBHm_Chr6g0299711
rosa_laevigata	RLG00000011394
rosa_multiflora	Rmu_sc0002895.1_g000012
rosa_roxburghii	Rroxscaffold_7G00168420
rosa_rugosa	Rorug06G0291700
rosa_samantha	Rh6AG402600 Rh6BG411200 Rh6CG417100 Rh6DG404100
rosa_wichuraiana	Rw6G035240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	513
Acc36I	ACCTGC	1 cut(s)	419
Acc65I	GGTACC	1 cut(s)	438
AccB1I	GGYRCC	2 cut(s)	342, 438
AccB7I	CCANNNNNTGG	1 cut(s)	656
AccBSI	CCGCTC	1 cut(s)	634
AccII	CGCG	1 cut(s)	615
AciI	CCGC	4 cut(s)	615, 632, 669, 708
AcsI	RAATTY	3 cut(s)	314, 685, 773
AcuI	CTGAAG	1 cut(s)	59
AfaI	GTAC	2 cut(s)	250, 440
AfiI	CCNNNNNNNGG	4 cut(s)	232, 500, 656, 697
AflIII	ACRYGT	1 cut(s)	406
AgsI	TTSAA	4 cut(s)	186, 199, 477, 802
AhlI	ACTAGT	1 cut(s)	103
AjnI	CCWGG	2 cut(s)	11, 225
AluBI	AGCT	8 cut(s)	128, 254, 324, 425, 480, 664, 829, 847
AluI	AGCT	8 cut(s)	128, 254, 324, 425, 480, 664, 829, 847
AlwNI	CAGNNNCTG	1 cut(s)	425
AoxI	GGCC	1 cut(s)	414
ApeKI	GCWGC	7 cut(s)	254, 422, 425, 506, 671, 674, 677
ApoI	RAATTY	3 cut(s)	314, 685, 773
Asp718I	GGTACC	1 cut(s)	438
AspA2I	CCTAGG	1 cut(s)	260
AspLEI	GCGC	2 cut(s)	506, 541
AspS9I	GGNCC	2 cut(s)	79, 369
AsuHPI	GGTGA	2 cut(s)	449, 455
AsuNHI	GCTAGC	1 cut(s)	664
AvaII	GGWCC	2 cut(s)	79, 369
AvrII	CCTAGG	1 cut(s)	260
BaeGI	GKGCMC	1 cut(s)	345
BanI	GGYRCC	2 cut(s)	342, 438
BbvCI	CCTCAGC	1 cut(s)	418
BbvI	GCAGC	7 cut(s)	241, 412, 434, 493, 683, 686, 689
BccI	CCATC	3 cut(s)	263, 468, 736
BceAI	ACGGC	1 cut(s)	805
BciT130I	CCWGG	2 cut(s)	13, 227
BclI	TGATCA	2 cut(s)	640, 808
BcuI	ACTAGT	1 cut(s)	103
BfaI	CTAG	6 cut(s)	104, 261, 282, 374, 665, 850
BfmI	CTRYAG	3 cut(s)	319, 426, 619
BfoI	RGCGCY	1 cut(s)	507
BfuAI	ACCTGC	1 cut(s)	419
BglII	AGATCT	1 cut(s)	172
BisI	GCNGC	9 cut(s)	255, 423, 426, 507, 616, 669, 672, 675, 678
BlnI	CCTAGG	1 cut(s)	260
BlsI	GCNGC	9 cut(s)	256, 424, 427, 508, 617, 670, 673, 676, 679
Bme1390I	CCNGG	2 cut(s)	13, 227
Bme18I	GGWCC	2 cut(s)	79, 369
BmgT120I	GGNCC	2 cut(s)	79, 369
BmiI	GGNNCC	7 cut(s)	6, 51, 81, 344, 371, 440, 748
BmrFI	CCNGG	2 cut(s)	13, 227
BmsI	GCATC	2 cut(s)	460, 584
BmtI	GCTAGC	1 cut(s)	668
BpmI	CTGGAG	1 cut(s)	27
Bpu10I	CCTNAGC	1 cut(s)	418
BpuEI	CTTGAG	2 cut(s)	197, 827
BsaJI	CCNNGG	2 cut(s)	260, 499
BsaXI	ACNNNNNCTCC	2 cut(s)	241, 271
Bsc4I	CCNNNNNNNGG	4 cut(s)	232, 500, 656, 697
BseBI	CCWGG	2 cut(s)	13, 227
BseDI	CCNNGG	2 cut(s)	260, 499
BseGI	GGATG	1 cut(s)	399
BseLI	CCNNNNNNNGG	4 cut(s)	232, 500, 656, 697
BseMII	CTCAG	1 cut(s)	432
BseRI	GAGGAG	1 cut(s)	42
BseSI	GKGCMC	1 cut(s)	345
BseXI	GCAGC	7 cut(s)	241, 412, 434, 493, 683, 686, 689
Bsh1236I	CGCG	1 cut(s)	615
BshFI	GGCC	1 cut(s)	416
BshNI	GGYRCC	2 cut(s)	342, 438
BslFI	GGGAC	2 cut(s)	415, 823
BslI	CCNNNNNNNGG	4 cut(s)	232, 500, 656, 697
BsmFI	GGGAC	2 cut(s)	415, 823
BsnI	GGCC	1 cut(s)	416
Bsp1286I	GDGCHC	1 cut(s)	345
Bsp143I	GATC	4 cut(s)	136, 172, 640, 808
Bsp19I	CCATGG	1 cut(s)	499
BspACI	CCGC	4 cut(s)	615, 632, 669, 708
BspANI	GGCC	1 cut(s)	416
BspCNI	CTCAG	1 cut(s)	431
BspFNI	CGCG	1 cut(s)	615
BspLI	GGNNCC	7 cut(s)	6, 51, 81, 344, 371, 440, 748
BspMAI	CTGCAG	1 cut(s)	430
BspMI	ACCTGC	1 cut(s)	419
BspOI	GCTAGC	1 cut(s)	668
BspT107I	GGYRCC	2 cut(s)	342, 438
BsrBI	CCGCTC	1 cut(s)	634
BssECI	CCNNGG	2 cut(s)	260, 499
BssMI	GATC	4 cut(s)	136, 172, 640, 808
BssT1I	CCWWGG	2 cut(s)	260, 499
Bst2UI	CCWGG	2 cut(s)	13, 227
Bst4CI	ACNGT	1 cut(s)	305
Bst6I	CTCTTC	1 cut(s)	114
BstC8I	GCNNGC	1 cut(s)	666
BstDEI	CTNAG	1 cut(s)	418
BstDSI	CCRYGG	1 cut(s)	499
BstF5I	GGATG	1 cut(s)	399
BstFNI	CGCG	1 cut(s)	615
BstH2I	RGCGCY	1 cut(s)	507
BstHHI	GCGC	2 cut(s)	506, 541
BstKTI	GATC	4 cut(s)	139, 175, 643, 811
BstMBI	GATC	4 cut(s)	136, 172, 640, 808
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 422, 674, 677
BstNI	CCWGG	2 cut(s)	13, 227
BstNSI	RCATGY	1 cut(s)	410
BstSCI	CCNGG	2 cut(s)	11, 225
BstSFI	CTRYAG	3 cut(s)	319, 426, 619
BstSLI	GKGCMC	1 cut(s)	345
BstUI	CGCG	1 cut(s)	615
BstV1I	GCAGC	7 cut(s)	241, 412, 434, 493, 683, 686, 689
BstX2I	RGATCY	1 cut(s)	172
BstYI	RGATCY	1 cut(s)	172
BsuRI	GGCC	1 cut(s)	416
BtgI	CCRYGG	1 cut(s)	499
BtsCI	GGATG	1 cut(s)	399
BveI	ACCTGC	1 cut(s)	419
Cac8I	GCNNGC	1 cut(s)	666
CaiI	CAGNNNCTG	1 cut(s)	425
CfoI	GCGC	2 cut(s)	506, 541
Cfr13I	GGNCC	2 cut(s)	79, 369
Csp6I	GTAC	2 cut(s)	249, 439
CviAII	CATG	7 cut(s)	57, 232, 294, 407, 500, 571, 727
CviQI	GTAC	2 cut(s)	249, 439
DdeI	CTNAG	1 cut(s)	418
DpnI	GATC	4 cut(s)	138, 174, 642, 810
DpnII	GATC	4 cut(s)	136, 172, 640, 808
Eam1104I	CTCTTC	1 cut(s)	114
EarI	CTCTTC	1 cut(s)	114
Eco130I	CCWWGG	2 cut(s)	260, 499
Eco47I	GGWCC	2 cut(s)	79, 369
Eco57I	CTGAAG	1 cut(s)	59
EcoO109I	RGGNCCY	2 cut(s)	79, 369
EcoRII	CCWGG	2 cut(s)	11, 225
EcoT14I	CCWWGG	2 cut(s)	260, 499
ErhI	CCWWGG	2 cut(s)	260, 499
FaeI	CATG	7 cut(s)	60, 235, 297, 410, 503, 574, 730
FalI	AAGNNNNNCTT	4 cut(s)	469, 501, 818, 850
FaqI	GGGAC	2 cut(s)	415, 823
FatI	CATG	7 cut(s)	56, 231, 293, 406, 499, 570, 726
FbaI	TGATCA	2 cut(s)	640, 808
Fnu4HI	GCNGC	9 cut(s)	255, 423, 426, 507, 616, 669, 672, 675, 678
FokI	GGATG	1 cut(s)	406
Fsp4HI	GCNGC	9 cut(s)	255, 423, 426, 507, 616, 669, 672, 675, 678
FspBI	CTAG	6 cut(s)	104, 261, 282, 374, 665, 850
GlaI	GCGC	2 cut(s)	505, 540
GluI	GCNGC	9 cut(s)	255, 423, 426, 507, 616, 669, 672, 675, 678
GsuI	CTGGAG	1 cut(s)	27
HaeII	RGCGCY	1 cut(s)	507
HaeIII	GGCC	1 cut(s)	416
HhaI	GCGC	2 cut(s)	506, 541
Hin1II	CATG	7 cut(s)	60, 235, 297, 410, 503, 574, 730
Hin6I	GCGC	2 cut(s)	504, 539
HinP1I	GCGC	2 cut(s)	504, 539
HindIII	AAGCTT	2 cut(s)	478, 827
HinfI	GANTC	2 cut(s)	182, 550
HphI	GGTGA	2 cut(s)	449, 455
Hpy188I	TCNGA	3 cut(s)	244, 268, 596
Hpy188III	TCNNGA	8 cut(s)	44, 77, 140, 176, 203, 627, 802, 812
Hpy99I	CGWCG	1 cut(s)	700
HpyAV	CCTTC	1 cut(s)	239
HpyCH4III	ACNGT	1 cut(s)	305
HpyCH4V	TGCA	3 cut(s)	297, 428, 451
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 422, 674, 677
HpyF3I	CTNAG	1 cut(s)	418
Hsp92II	CATG	7 cut(s)	60, 235, 297, 410, 503, 574, 730
HspAI	GCGC	2 cut(s)	504, 539
KpnI	GGTACC	1 cut(s)	442
Ksp22I	TGATCA	2 cut(s)	640, 808
Kzo9I	GATC	4 cut(s)	136, 172, 640, 808
LmnI	GCTCC	3 cut(s)	46, 55, 262
Lsp1109I	GCAGC	7 cut(s)	241, 412, 434, 493, 683, 686, 689
LweI	GCATC	2 cut(s)	460, 584
MaeI	CTAG	6 cut(s)	104, 261, 282, 374, 665, 850
MalI	GATC	4 cut(s)	138, 174, 642, 810
MbiI	CCGCTC	1 cut(s)	634
MboI	GATC	4 cut(s)	136, 172, 640, 808
MboII	GAAGA	4 cut(s)	125, 131, 573, 835
MfeI	CAATTG	1 cut(s)	654
MflI	RGATCY	1 cut(s)	172
MhlI	GDGCHC	1 cut(s)	345
MluCI	AATT	7 cut(s)	16, 314, 562, 654, 685, 765, 773
MslI	CAYNNNNRTG	1 cut(s)	348
MspA1I	CMGCKG	2 cut(s)	254, 425
MspR9I	CCNGG	2 cut(s)	13, 227
MunI	CAATTG	1 cut(s)	654
MvaI	CCWGG	2 cut(s)	13, 227
MvnI	CGCG	1 cut(s)	615
MwoI	GCNNNNNNNGC	4 cut(s)	47, 422, 674, 677
NcoI	CCATGG	1 cut(s)	499
NdeII	GATC	4 cut(s)	136, 172, 640, 808
NheI	GCTAGC	1 cut(s)	664
NlaIII	CATG	7 cut(s)	60, 235, 297, 410, 503, 574, 730
NlaIV	GGNNCC	7 cut(s)	6, 51, 81, 344, 371, 440, 748
NspI	RCATGY	1 cut(s)	410
PciI	ACATGT	1 cut(s)	406
PfeI	GAWTC	2 cut(s)	182, 550
PflMI	CCANNNNNTGG	1 cut(s)	656
PkrI	GCNGC	9 cut(s)	256, 424, 427, 508, 617, 670, 673, 676, 679
PpuMI	RGGWCCY	2 cut(s)	79, 369
PscI	ACATGT	1 cut(s)	406
PsiI	TTATAA	1 cut(s)	513
Psp5II	RGGWCCY	2 cut(s)	79, 369
Psp6I	CCWGG	2 cut(s)	11, 225
PspGI	CCWGG	2 cut(s)	11, 225
PspN4I	GGNNCC	7 cut(s)	6, 51, 81, 344, 371, 440, 748
PspPI	GGNCC	2 cut(s)	79, 369
PspPPI	RGGWCCY	2 cut(s)	79, 369
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	425
PsuI	RGATCY	1 cut(s)	172
PvuII	CAGCTG	2 cut(s)	254, 425
RsaI	GTAC	2 cut(s)	250, 440
RsaNI	GTAC	2 cut(s)	249, 439
RseI	CAYNNNNRTG	1 cut(s)	348
SatI	GCNGC	9 cut(s)	255, 423, 426, 507, 616, 669, 672, 675, 678
Sau3AI	GATC	4 cut(s)	136, 172, 640, 808
Sau96I	GGNCC	2 cut(s)	79, 369
ScrFI	CCNGG	2 cut(s)	13, 227
SduI	GDGCHC	1 cut(s)	345
SfaNI	GCATC	2 cut(s)	460, 584
SfcI	CTRYAG	3 cut(s)	319, 426, 619
SinI	GGWCC	2 cut(s)	79, 369
SmiMI	CAYNNNNRTG	1 cut(s)	348
SmlI	CTYRAG	2 cut(s)	176, 842
SmoI	CTYRAG	2 cut(s)	176, 842
SpeI	ACTAGT	1 cut(s)	103
Sse9I	AATT	7 cut(s)	16, 314, 562, 654, 685, 765, 773
SsiI	CCGC	4 cut(s)	615, 632, 669, 708
SspI	AATATT	1 cut(s)	163
SspMI	CTAG	6 cut(s)	104, 261, 282, 374, 665, 850
StyD4I	CCNGG	2 cut(s)	11, 225
StyI	CCWWGG	2 cut(s)	260, 499
TaaI	ACNGT	1 cut(s)	305
TasI	AATT	7 cut(s)	16, 314, 562, 654, 685, 765, 773
TauI	GCSGC	2 cut(s)	618, 671
TfiI	GAWTC	2 cut(s)	182, 550
TseI	GCWGC	7 cut(s)	254, 422, 425, 506, 671, 674, 677
TspDTI	ATGAA	5 cut(s)	36, 132, 167, 228, 836
Van91I	CCANNNNNTGG	1 cut(s)	656
VpaK11BI	GGWCC	2 cut(s)	79, 369
XapI	RAATTY	3 cut(s)	314, 685, 773
XceI	RCATGY	1 cut(s)	410
XmaJI	CCTAGG	1 cut(s)	260
XspI	CTAG	6 cut(s)	104, 261, 282, 374, 665, 850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.