Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1261200.v1.1 |
| rosa_multiflora | Rmu_co8406561.1_g000001 Rmu_sc0018109.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00004500 Rroxscaffold_5G00359800 |
| rosa_rugosa | Rorug04G0450700 |
| rosa_samantha | Rh4BG196600 Rh4DG197200 Rh7CG141000 Rh7DG138700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 96 |
| AciI | CCGC | 1 cut(s) | 132 |
| AcuI | CTGAAG | 1 cut(s) | 80 |
| AgsI | TTSAA | 3 cut(s) | 74, 160, 169 |
| AjnI | CCWGG | 1 cut(s) | 99 |
| BanI | GGYRCC | 1 cut(s) | 96 |
| BciT130I | CCWGG | 1 cut(s) | 101 |
| Bme1390I | CCNGG | 1 cut(s) | 101 |
| BmiI | GGNNCC | 2 cut(s) | 98, 105 |
| BmrFI | CCNGG | 1 cut(s) | 101 |
| BmsI | GCATC | 1 cut(s) | 119 |
| Bse1I | ACTGG | 1 cut(s) | 98 |
| BseBI | CCWGG | 1 cut(s) | 101 |
| BseNI | ACTGG | 1 cut(s) | 98 |
| BshNI | GGYRCC | 1 cut(s) | 96 |
| Bsp143I | GATC | 1 cut(s) | 52 |
| BspACI | CCGC | 1 cut(s) | 132 |
| BspLI | GGNNCC | 2 cut(s) | 98, 105 |
| BspT107I | GGYRCC | 1 cut(s) | 96 |
| BsrI | ACTGG | 1 cut(s) | 98 |
| BssMI | GATC | 1 cut(s) | 52 |
| Bst2UI | CCWGG | 1 cut(s) | 101 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstKTI | GATC | 1 cut(s) | 55 |
| BstMBI | GATC | 1 cut(s) | 52 |
| BstNI | CCWGG | 1 cut(s) | 101 |
| BstSCI | CCNGG | 1 cut(s) | 99 |
| BtsI | GCAGTG | 1 cut(s) | 71 |
| BtsIMutI | CAGTG | 1 cut(s) | 71 |
| CsiI | ACCWGGT | 1 cut(s) | 99 |
| CviAII | CATG | 2 cut(s) | 13, 33 |
| CviJI | RGCY | 2 cut(s) | 120, 172 |
| CviKI_1 | RGCY | 2 cut(s) | 120, 172 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| DpnI | GATC | 1 cut(s) | 54 |
| DpnII | GATC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 80 |
| EcoRII | CCWGG | 1 cut(s) | 99 |
| FaeI | CATG | 2 cut(s) | 16, 36 |
| FaiI | YATR | 3 cut(s) | 14, 34, 124 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 39, 71 |
| FatI | CATG | 2 cut(s) | 12, 32 |
| FauI | CCCGC | 1 cut(s) | 125 |
| Hin1II | CATG | 2 cut(s) | 16, 36 |
| Hpy188I | TCNGA | 1 cut(s) | 60 |
| Hpy188III | TCNNGA | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 2 cut(s) | 32, 69 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| Hsp92II | CATG | 2 cut(s) | 16, 36 |
| Kzo9I | GATC | 1 cut(s) | 52 |
| LpnPI | CCDG | 3 cut(s) | 79, 86, 113 |
| LweI | GCATC | 1 cut(s) | 119 |
| MabI | ACCWGGT | 1 cut(s) | 99 |
| MaeIII | GTNAC | 1 cut(s) | 8 |
| MalI | GATC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 52 |
| MboII | GAAGA | 2 cut(s) | 47, 59 |
| MluCI | AATT | 1 cut(s) | 174 |
| MnlI | CCTC | 3 cut(s) | 15, 37, 117 |
| MslI | CAYNNNNRTG | 1 cut(s) | 17 |
| MspR9I | CCNGG | 1 cut(s) | 101 |
| MvaI | CCWGG | 1 cut(s) | 101 |
| NdeII | GATC | 1 cut(s) | 52 |
| NlaIII | CATG | 2 cut(s) | 16, 36 |
| NlaIV | GGNNCC | 2 cut(s) | 98, 105 |
| Psp6I | CCWGG | 1 cut(s) | 99 |
| PspGI | CCWGG | 1 cut(s) | 99 |
| PspN4I | GGNNCC | 2 cut(s) | 98, 105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 17 |
| Sau3AI | GATC | 1 cut(s) | 52 |
| ScrFI | CCNGG | 1 cut(s) | 101 |
| SetI | ASST | 3 cut(s) | 31, 105, 155 |
| SexAI | ACCWGGT | 1 cut(s) | 99 |
| SfaNI | GCATC | 1 cut(s) | 119 |
| SgeI | CNNG | 8 cut(s) | 25, 45, 92, 106, 112, 113, 145, 178 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 17 |
| Sse9I | AATT | 1 cut(s) | 174 |
| SsiI | CCGC | 1 cut(s) | 132 |
| StyD4I | CCNGG | 1 cut(s) | 99 |
| TasI | AATT | 1 cut(s) | 174 |
| TscAI | CASTG | 1 cut(s) | 71 |
| TspGWI | ACGGA | 1 cut(s) | 96 |
| TspRI | CASTG | 1 cut(s) | 71 |