Rh7DG063800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
4960610 .. 4961098
489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG063800.1

Sequence Viewer

Length: 240 bp
ATGGTTAAAACAATTGTTGAGGAAACTTTCCAAGGCCATTCTCCGACCAAAAGGAAGAAGACTTCCACCAGCTCCATGACTGGCACTTCAAATGCTGCAGCAGACACTGGAAGCAAGCCATCTGAGGAGGCCATAGCCACTGACTTCAAGCAACAAGATGCCCTACAGCTGATGCCTAAGCAGTTCAGAATAATTGATTCGACTTGCTACAGCCGTGTTATAGTGGAGAACTGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

79

Amino Acids

8.81

Weight (kDa)

8.89

Isoelectric Point (pI)

46.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 90, 148
AluBI AGCT 2 cut(s) 72, 169
AluI AGCT 2 cut(s) 72, 169
AlwNI CAGNNNCTG 1 cut(s) 107
AoxI GGCC 2 cut(s) 34, 129
ApeKI GCWGC 2 cut(s) 95, 98
BbsI GAAGAC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 82, 110
BccI CCATC 1 cut(s) 127
BceAI ACGGC 1 cut(s) 198
BfmI CTRYAG 3 cut(s) 96, 164, 208
BisI GCNGC 2 cut(s) 96, 99
BlsI GCNGC 2 cut(s) 97, 100
BmsI GCATC 2 cut(s) 148, 162
BpiI GAAGAC 1 cut(s) 65
Bpu10I CCTNAGC 1 cut(s) 177
BsaJI CCNNGG 1 cut(s) 31
Bse1I ACTGG 3 cut(s) 85, 112, 236
BseDI CCNNGG 1 cut(s) 31
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 3 cut(s) 85, 112, 236
BseRI GAGGAG 1 cut(s) 140
BseXI GCAGC 2 cut(s) 82, 110
BshFI GGCC 2 cut(s) 36, 131
BsnI GGCC 2 cut(s) 36, 131
BspANI GGCC 2 cut(s) 36, 131
BspCNI CTCAG 1 cut(s) 115
BspMAI CTGCAG 1 cut(s) 100
BsrI ACTGG 3 cut(s) 85, 112, 236
BssECI CCNNGG 1 cut(s) 31
BssT1I CCWWGG 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 116
BstDEI CTNAG 2 cut(s) 123, 177
BstSFI CTRYAG 3 cut(s) 96, 164, 208
BstV1I GCAGC 2 cut(s) 82, 110
BstV2I GAAGAC 1 cut(s) 65
BsuRI GGCC 2 cut(s) 36, 131
BtsIMutI CAGTG 2 cut(s) 105, 138
Cac8I GCNNGC 1 cut(s) 116
CaiI CAGNNNCTG 1 cut(s) 107
CviAII CATG 1 cut(s) 76
CviJI RGCY 7 cut(s) 36, 72, 118, 131, 137, 169, 213
CviKI_1 RGCY 7 cut(s) 36, 72, 118, 131, 137, 169, 213
DdeI CTNAG 2 cut(s) 123, 177
Eco130I CCWWGG 1 cut(s) 31
EcoT14I CCWWGG 1 cut(s) 31
ErhI CCWWGG 1 cut(s) 31
FaeI CATG 1 cut(s) 79
FaiI YATR 3 cut(s) 77, 134, 221
FatI CATG 1 cut(s) 75
Fnu4HI GCNGC 2 cut(s) 96, 99
Fsp4HI GCNGC 2 cut(s) 96, 99
GluI GCNGC 2 cut(s) 96, 99
HaeIII GGCC 2 cut(s) 36, 131
Hin1II CATG 1 cut(s) 79
HinfI GANTC 1 cut(s) 197
Hpy188I TCNGA 3 cut(s) 45, 124, 188
HpyCH4V TGCA 1 cut(s) 98
HpyF3I CTNAG 2 cut(s) 123, 177
Hsp92II CATG 1 cut(s) 79
LmnI GCTCC 1 cut(s) 77
LpnPI CCDG 4 cut(s) 66, 82, 93, 217
Lsp1109I GCAGC 2 cut(s) 82, 110
LweI GCATC 2 cut(s) 148, 162
MboII GAAGA 2 cut(s) 67, 70
MfeI CAATTG 1 cut(s) 12
MluCI AATT 2 cut(s) 12, 192
MmeI TCCRAC 1 cut(s) 68
MnlI CCTC 3 cut(s) 13, 118, 121
MseI TTAA 1 cut(s) 6
MspA1I CMGCKG 1 cut(s) 169
MunI CAATTG 1 cut(s) 12
NlaIII CATG 1 cut(s) 79
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 2 cut(s) 97, 100
PstI CTGCAG 1 cut(s) 100
PstNI CAGNNNCTG 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 169
SaqAI TTAA 1 cut(s) 6
SatI GCNGC 2 cut(s) 96, 99
SetI ASST 2 cut(s) 74, 171
SfaNI GCATC 2 cut(s) 148, 162
SfcI CTRYAG 3 cut(s) 96, 164, 208
Sse9I AATT 2 cut(s) 12, 192
StyI CCWWGG 1 cut(s) 31
TaqI TCGA 1 cut(s) 200
TasI AATT 2 cut(s) 12, 192
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 1 cut(s) 6
Tru9I TTAA 1 cut(s) 6
TscAI CASTG 2 cut(s) 112, 145
TseI GCWGC 2 cut(s) 95, 98
TspRI CASTG 2 cut(s) 112, 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.