Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0017654

Physical Location & Seq

Genomic Coordinates Forward (+)

60981392 .. 60985109

Gene Structure 3718 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG353200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGGACAACATGAGTTTTATAGAGACTGACGGTATTCCTGAATTTGCGCACGGCCTTAAAATCCTGCTGTTCGATCATGACACATTTTCCCTCATGTACACAGCATCAGTGCTTGAACAATACTCATTCAATGTTACTGCAATCGAGCAGGCATCTGTCGCTTTGTCTATGATTAGTGAACAAAAGGATCACTATGAACTAGTAATGGCTAGCATTAACATGTCTGATATTGAGAGTGTTTCTTTTCTGCATGCACTGCTCGAGAAGGATATTCCTGTCATATTGATCTCCTCTGAAATGAATGCTGACATGACCAGGAAAGCCCTAGACAAAGTAGCAAGCATTATCCTTGAGAAACCCATTCCTTTGGAGGATCTGAAAAATGTGTGGCGACACGTATACAGGAAGACAAACCCAATGGAGGACATAGGTAAACCAAATTGTGAAGAAAAGATAGACTGGCCAAAGGACTATCAAGAGTCTTCAGTGCTTAGACCTTCCTTTGGAGGTATTGAAACCGAGGATGGTGCATTGTGTAGGCCTGATACAGGGCATTATTGGAATGGCACTGGCCTTGAAACTGATCTAGAAGGTTTGCATAGCTATAGCATCGAAGGGTTGTTCCCAACAGAGAGCCAAAAACAAAAAGCATCTGGGATGAAGCCAGCTGATGATACCGAAGAACAAGGAAAACAAAAAAAATTGAAACCAACTGTAAAGCAAACTGATTCTGACAGTATAGCCAGGAATCAGGAAGGGATCTCCAAGAAACATAGCAATGACAAAACAGATAAGAAAGAACGTATTAATTGGACTTCGGACCTGCATTTCAAGTTTACAACAGCAATAAGTGCCTTGGGAGATCAAAAAGCTCGTCCTAAAGCGATTATGAACATGATGGGTGTGGAGAATTTAACAATGCGCCAGGTTGCAAGCCATCTTCAGAAATACAAAAATCAAGTACGGCGAATTAACGAGACTGGCATATTTACTGGAAGAACTAGTTTAAGCAAAGTTTCTGGTGGGAATGAGTTTGTGCCACCAAAGCAAAGTTCTCTGGTATACCAGAAGAAACCAGGGACTTCAAGGTTTGGAGTAGGAGGTAAACCAACAGAATCAACTACTCCAAATTCTTTGACCAGATCTTCGATCTGTGTAGCTAGTTTCGACAATCATGACTACAGAATGCAGAATCTAAACTCAAGCCATGGAGGCTTGTCTCGCTACGGAAATACCAATAGCCCCAATGATTCTCTAAGAACTGATGGTTGGCTTCAAAATATGAACCAGATACCAGAAACAAGCAGTTTTGCATACAAAACTGGCATGAAGGAAATATTGAAGAAAAAACTGAAAGTAACTGAAAACTTACCGGGCATGACGTCCATGACTTCAGAGGTTGATCCTCCCAACATGTCAACCAATACATTCCAGCTCCCCGATGAGCCTCCTGCCGTGCATCAAAAGCAAAATTGTACTCCTGCTTTGACTGATCCCTTCAATTCCATAAACAAGGAAACACCAATTGCAGGAACAACAGAAGTGCTTGAGCTACAGAAGATGAACCTACCAAGTATGAACTACTCGACTCCAGAGGCAGATTCTCCTTACATGTCGGCAAATGCATTTCAGTTCTCATATGAGGTTTCAGTTGCGAATCAAGAGCAAAATTGTACTCTAATTGTAAGTGCTCCCATGAACTCTGAAACTCGGGACAAGTTTTCAACAGAAGATCAACGAAGTGAATTATTTGAGACCATGCCAATGAATTTACCAAGCATGATTTACATGACACCAGACAGTGCTTCAGTGAACCAAGAGCAATATTATGCTCCAGTTAATACCTCCAGTTCCGAAACTCAGAACAGTTTTTCAACAGAAGTTGCAGGAACAAATGAACTACTTGAGCTTCTGCTAAAGGATTCGCCTAGTATGGAGTACATGACTACTGAGGATGCTTCTCCCCACAAATCAGAAAATGCATCTCAGCTCCCGAATGAGCCTCTCAACATGGACCTAGAACAATACCGTACTCCTTCACGTAATGCTAACAATCTAGGGAACCTTCCAGCAAACTTCAACGATGGAAGCCAGAAGCTGGACACTCTAGCAGGAGAGGCACCTCCTGCGATTTTATCAAATGACCACCAGCACTATACTCCAGCTTTCACTGTTCCATTCGCTTTCCAAAATCAGAACAAGGTTTCTCCAGTAACAACTGAACTTCAGCTTCTGGAGGAGCAAACAGCTTCAAGCAATGCAAAAAACTTACAGAACCTCCCAACAAAATTCAACAGTGGAAGCCAGAAGCTGGATACTATAACAGGAGAGGCACCTCCTGCGATTTCATTAAATGAGCACCAGCACTGTACTCCATCTTTCACCGTTCCATTCGATTCCCAAAATCAGAACAAGGTTTCGGATACTATAACAGGAGAGGCACCTCCTGCGATTTCATTAAATGAGCACCAGCACTGTACTCCATCTTTCACCGTTCCATTCGATTCCCAAAATCAGAACAAGGTTTCTCCAGTAACAACTGAATTGGGGGAACAAAAAGCTTCAAGCAATGCAAAAGATATAGAGAACCTTCCAGTATACTTCAACAGTGGAAGCCAGGAGCTGAATAATTTAACAGGAGACGCTCCTCCAGCTATTTCATCAAATGAGCACCAGCCACTGTCAGAGTATGCTGACCTGTTGAAAATGCTTGAAGCAGATCCGGAGTACAATTCTTTTGGCAATGCACCATATGCAGGCAATTTTGATGAATACCGTGAATGGCTGGAGAGAACTTTATTTGGAGATAGCACAGAACAACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

941

Amino Acids

104.6

Weight (kDa)

4.9

Isoelectric Point (pI)

49.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	21 - 128	2.6e-10	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0017654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g26570
malus_domestica	MD13G1034600.v1.1 MD16G1036100.v1.1
prunus_persica	Prupe.1G317900_v2.0.a1
rosa_laevigata	RLG00000006691
rosa_multiflora	Rmu_sc0000459.1_g000011
rosa_roxburghii	Rroxscaffold_5G00375600
rosa_samantha	Rh4AG330200 Rh4BG337800 Rh4CG353200 Rh4DG333800
rosa_wichuraiana	Rw4G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1385
Acc16I	TGCGCA	1 cut(s)	48
Acc36I	ACCTGC	1 cut(s)	831
AccB1I	GGYRCC	3 cut(s)	2119, 2332, 2440
AccB7I	CCANNNNNTGG	2 cut(s)	2098, 2311
AccI	GTMKAC	3 cut(s)	399, 1062, 2598
AccIII	TCCGGA	1 cut(s)	2722
AclWI	GGATC	6 cut(s)	195, 381, 767, 1397, 1487, 2714
AcoI	YGGCCR	1 cut(s)	461
AcsI	RAATTY	5 cut(s)	41, 910, 1129, 1768, 2288
AcuI	CTGAAG	5 cut(s)	468, 926, 1377, 1791, 2210
AcyI	GRCGYC	1 cut(s)	1382
AfaI	GTAC	9 cut(s)	98, 963, 1477, 1675, 1940, 2032, 2371, 2479, 2729
AfiI	CCNNNNNNNGG	7 cut(s)	421, 503, 548, 1529, 2098, 2311, 2756
AflIII	ACRYGT	4 cut(s)	219, 394, 1413, 1611
AhlI	ACTAGT	2 cut(s)	199, 1001
AjnI	CCWGG	5 cut(s)	314, 743, 924, 1075, 2616
AjuI	GAANNNNNNNTTGG	4 cut(s)	1036, 1068, 1252, 1284
Alw21I	GWGCWC	4 cut(s)	1693, 2361, 2469, 2673
Alw26I	GTCTC	5 cut(s)	17, 971, 1224, 1748, 2634
AlwI	GGATC	6 cut(s)	195, 381, 767, 1397, 1487, 2714
AlwNI	CAGNNNCTG	5 cut(s)	2098, 2233, 2311, 2623, 2680
Ama87I	CYCGRG	2 cut(s)	260, 1710
Aor13HI	TCCGGA	1 cut(s)	2722
AoxI	GGCC	4 cut(s)	52, 461, 539, 571
ApoI	RAATTY	5 cut(s)	41, 910, 1129, 1768, 2288
ArsI	GACNNNNNNTTYG	4 cut(s)	859, 891, 1129, 1161
AseI	ATTAAT	1 cut(s)	807
AspLEI	GCGC	2 cut(s)	49, 924
AspS9I	GGNCC	2 cut(s)	820, 2014
AsuC2I	CCSGG	1 cut(s)	1374
AsuHPI	GGTGA	2 cut(s)	2374, 2482
AsuNHI	GCTAGC	1 cut(s)	209
AvaI	CYCGRG	2 cut(s)	260, 1710
AvaII	GGWCC	2 cut(s)	820, 2014
BalI	TGGCCA	1 cut(s)	463
BanI	GGYRCC	3 cut(s)	2119, 2332, 2440
BbsI	GAAGAC	2 cut(s)	413, 474
Bbv12I	GWGCWC	4 cut(s)	1693, 2361, 2469, 2673
BccI	CCATC	7 cut(s)	518, 892, 945, 1259, 2078, 2383, 2491
BceAI	ACGGC	3 cut(s)	67, 980, 1439
BcgI	CGANNNNNNTGC	2 cut(s)	509, 543
BciT130I	CCWGG	5 cut(s)	316, 745, 926, 1077, 2618
BciVI	GTATCC	2 cut(s)	2308, 2416
BcnI	CCSGG	1 cut(s)	1374
BcoDI	GTCTC	5 cut(s)	17, 971, 1224, 1748, 2634
BcuI	ACTAGT	2 cut(s)	199, 1001
BfmI	CTRYAG	3 cut(s)	604, 1180, 1553
BfuAI	ACCTGC	1 cut(s)	831
BfuI	GTATCC	2 cut(s)	2308, 2416
BglI	GCCNNNNNGGC	1 cut(s)	1212
BglII	AGATCT	1 cut(s)	1142
Bme1390I	CCNGG	6 cut(s)	316, 745, 926, 1077, 1374, 2618
Bme18I	GGWCC	2 cut(s)	820, 2014
BmeT110I	CYCGRG	2 cut(s)	260, 1710
BmgT120I	GGNCC	2 cut(s)	820, 2014
BmiI	GGNNCC	4 cut(s)	2063, 2121, 2334, 2442
BmrFI	CCNGG	6 cut(s)	316, 745, 926, 1077, 1374, 2618
BmsI	GCATC	7 cut(s)	113, 161, 618, 659, 1468, 1945, 1991
BmtI	GCTAGC	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	413, 474
BpmI	CTGGAG	9 cut(s)	1575, 1818, 1831, 2145, 2193, 2255, 2514, 2634, 2807
BpuEI	CTTGAG	4 cut(s)	371, 1186, 1568, 1925
BpuMI	CCSGG	1 cut(s)	1374
BsaAI	YACGTR	2 cut(s)	397, 2042
BsaHI	GRCGYC	1 cut(s)	1382
BsaI	GGTCTC	1 cut(s)	1748
BsaJI	CCNNGG	4 cut(s)	519, 855, 1076, 1207
BsaWI	WCCGGW	1 cut(s)	2722
BsaXI	ACNNNNNCTCC	2 cut(s)	2262, 2292
Bsc4I	CCNNNNNNNGG	7 cut(s)	421, 503, 548, 1529, 2098, 2311, 2756
Bse3DI	GCAATG	4 cut(s)	784, 2263, 2575, 2749
BseAI	TCCGGA	1 cut(s)	2722
BseBI	CCWGG	5 cut(s)	316, 745, 926, 1077, 2618
BseDI	CCNNGG	4 cut(s)	519, 855, 1076, 1207
BseGI	GGATG	3 cut(s)	529, 663, 1960
BseLI	CCNNNNNNNGG	7 cut(s)	421, 503, 548, 1529, 2098, 2311, 2756
BseMI	GCAATG	4 cut(s)	784, 2263, 2575, 2749
BseMII	CTCAG	3 cut(s)	1874, 1941, 2000
BseRI	GAGGAG	3 cut(s)	280, 2252, 2637
BshFI	GGCC	4 cut(s)	54, 463, 541, 573
BshNI	GGYRCC	3 cut(s)	2119, 2332, 2440
BsiHKAI	GWGCWC	4 cut(s)	1693, 2361, 2469, 2673
BsiHKCI	CYCGRG	2 cut(s)	260, 1710
BsiSI	CCGG	2 cut(s)	1373, 2723
BslFI	GGGAC	2 cut(s)	1093, 1727
BslI	CCNNNNNNNGG	7 cut(s)	421, 503, 548, 1529, 2098, 2311, 2756
BsmAI	GTCTC	5 cut(s)	17, 971, 1224, 1748, 2634
BsmBI	CGTCTC	1 cut(s)	2634
BsmFI	GGGAC	2 cut(s)	1093, 1727
BsmI	GAATGC	2 cut(s)	307, 1191
BsnI	GGCC	4 cut(s)	54, 463, 541, 573
Bso31I	GGTCTC	1 cut(s)	1748
BsoBI	CYCGRG	2 cut(s)	260, 1710
Bsp1286I	GDGCHC	4 cut(s)	1693, 2361, 2469, 2673
Bsp13I	TCCGGA	1 cut(s)	2722
Bsp1407I	TGTACA	1 cut(s)	96
Bsp19I	CCATGG	1 cut(s)	1207
BspANI	GGCC	4 cut(s)	54, 463, 541, 573
BspCNI	CTCAG	3 cut(s)	1873, 1942, 1999
BspEI	TCCGGA	1 cut(s)	2722
BspHI	TCATGA	2 cut(s)	76, 1174
BspLI	GGNNCC	4 cut(s)	2063, 2121, 2334, 2442
BspMI	ACCTGC	1 cut(s)	831
BspOI	GCTAGC	1 cut(s)	213
BspPI	GGATC	6 cut(s)	195, 381, 767, 1397, 1487, 2714
BspT107I	GGYRCC	3 cut(s)	2119, 2332, 2440
BspTNI	GGTCTC	1 cut(s)	1748
BsrDI	GCAATG	4 cut(s)	784, 2263, 2575, 2749
BsrGI	TGTACA	1 cut(s)	96
BssECI	CCNNGG	4 cut(s)	519, 855, 1076, 1207
BssNAI	GTATAC	3 cut(s)	400, 1063, 2599
BssNI	GRCGYC	1 cut(s)	1382
BssT1I	CCWWGG	2 cut(s)	855, 1207
Bst1107I	GTATAC	3 cut(s)	400, 1063, 2599
Bst2UI	CCWGG	5 cut(s)	316, 745, 926, 1077, 2618
BstACI	GRCGYC	1 cut(s)	1382
BstAPI	GCANNNNNTGC	6 cut(s)	256, 851, 2126, 2339, 2447, 2753
BstAUI	TGTACA	1 cut(s)	96
BstBAI	YACGTR	2 cut(s)	397, 2042
BstC8I	GCNNGC	7 cut(s)	150, 211, 252, 340, 666, 934, 2758
BstDEI	CTNAG	5 cut(s)	491, 1256, 1860, 1950, 1986
BstDSI	CCRYGG	1 cut(s)	1207
BstENI	CCTNNNNNAGG	1 cut(s)	546
BstF5I	GGATG	3 cut(s)	529, 663, 1960
BstHHI	GCGC	2 cut(s)	49, 924
BstMAI	GTCTC	5 cut(s)	17, 971, 1224, 1748, 2634
BstNI	CCWGG	5 cut(s)	316, 745, 926, 1077, 2618
BstNSI	RCATGY	4 cut(s)	223, 254, 1417, 1615
BstSCI	CCNGG	6 cut(s)	314, 743, 924, 1075, 1372, 2616
BstSFI	CTRYAG	3 cut(s)	604, 1180, 1553
BstV2I	GAAGAC	2 cut(s)	413, 474
BstX2I	RGATCY	4 cut(s)	373, 759, 1142, 2719
BstXI	CCANNNNNNTGG	1 cut(s)	367
BstYI	RGATCY	4 cut(s)	373, 759, 1142, 2719
BstZ17I	GTATAC	3 cut(s)	400, 1063, 2599
BsuI	GTATCC	2 cut(s)	2308, 2416
BsuRI	GGCC	4 cut(s)	54, 463, 541, 573
BtgI	CCRYGG	1 cut(s)	1207
BtsCI	GGATG	3 cut(s)	529, 663, 1960
BtsI	GCAGTG	1 cut(s)	254
BveI	ACCTGC	1 cut(s)	831
Cac8I	GCNNGC	7 cut(s)	150, 211, 252, 340, 666, 934, 2758
CaiI	CAGNNNCTG	5 cut(s)	2098, 2233, 2311, 2623, 2680
CciI	TCATGA	2 cut(s)	76, 1174
CfoI	GCGC	2 cut(s)	49, 924
Cfr13I	GGNCC	2 cut(s)	820, 2014
CseI	GACGC	1 cut(s)	2651
Csp6I	GTAC	9 cut(s)	97, 962, 1476, 1674, 1939, 2031, 2370, 2478, 2728
CviQI	GTAC	9 cut(s)	97, 962, 1476, 1674, 1939, 2031, 2370, 2478, 2728
DdeI	CTNAG	5 cut(s)	491, 1256, 1860, 1950, 1986
EaeI	YGGCCR	1 cut(s)	461
Eco130I	CCWWGG	2 cut(s)	855, 1207
Eco147I	AGGCCT	1 cut(s)	541
Eco31I	GGTCTC	1 cut(s)	1748
Eco47I	GGWCC	2 cut(s)	820, 2014
Eco57I	CTGAAG	5 cut(s)	468, 926, 1377, 1791, 2210
Eco88I	CYCGRG	2 cut(s)	260, 1710
EcoNI	CCTNNNNNAGG	1 cut(s)	546
EcoRII	CCWGG	5 cut(s)	314, 743, 924, 1075, 2616
EcoT14I	CCWWGG	2 cut(s)	855, 1207
EcoT22I	ATGCAT	2 cut(s)	1627, 1984
ErhI	CCWWGG	2 cut(s)	855, 1207
Esp3I	CGTCTC	1 cut(s)	2634
FaqI	GGGAC	2 cut(s)	1093, 1727
FauNDI	CATATG	2 cut(s)	1639, 2752
FblI	GTMKAC	3 cut(s)	399, 1062, 2598
FokI	GGATG	3 cut(s)	536, 670, 1967
FspI	TGCGCA	1 cut(s)	48
GlaI	GCGC	2 cut(s)	48, 923
GsuI	CTGGAG	9 cut(s)	1575, 1818, 1831, 2145, 2193, 2255, 2514, 2634, 2807
HaeIII	GGCC	4 cut(s)	54, 463, 541, 573
HapII	CCGG	2 cut(s)	1373, 2723
HgaI	GACGC	1 cut(s)	2651
HhaI	GCGC	2 cut(s)	49, 924
Hin1I	GRCGYC	1 cut(s)	1382
Hin6I	GCGC	2 cut(s)	47, 922
HinP1I	GCGC	2 cut(s)	47, 922
HincII	GTYRAC	1 cut(s)	1419
HindII	GTYRAC	1 cut(s)	1419
HindIII	AAGCTT	1 cut(s)	2559
HpaII	CCGG	2 cut(s)	1373, 2723
HphI	GGTGA	2 cut(s)	2374, 2482
HpyCH4IV	ACGT	4 cut(s)	396, 802, 1382, 2041
HpyF3I	CTNAG	5 cut(s)	491, 1256, 1860, 1950, 1986
HpySE526I	ACGT	4 cut(s)	396, 802, 1382, 2041
Hsp92I	GRCGYC	1 cut(s)	1382
HspAI	GCGC	2 cut(s)	47, 922
Kpn2I	TCCGGA	1 cut(s)	2722
LmnI	GCTCC	7 cut(s)	1440, 1696, 1837, 1995, 2239, 2620, 2650
LweI	GCATC	7 cut(s)	113, 161, 618, 659, 1468, 1945, 1991
MaeII	ACGT	4 cut(s)	396, 802, 1382, 2041
MaeIII	GTNAC	4 cut(s)	133, 1357, 2212, 2533
MfeI	CAATTG	1 cut(s)	1524
MflI	RGATCY	4 cut(s)	373, 759, 1142, 2719
MhlI	GDGCHC	4 cut(s)	1693, 2361, 2469, 2673
MlsI	TGGCCA	1 cut(s)	463
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	2 cut(s)	488, 1582
Mox20I	TGGCCA	1 cut(s)	463
Mph1103I	ATGCAT	2 cut(s)	1627, 1984
MroI	TCCGGA	1 cut(s)	2722
MscI	TGGCCA	1 cut(s)	463
MslI	CAYNNNNRTG	3 cut(s)	218, 777, 1763
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	1 cut(s)	668
MspI	CCGG	2 cut(s)	1373, 2723
MspR9I	CCNGG	6 cut(s)	316, 745, 926, 1077, 1374, 2618
MunI	CAATTG	1 cut(s)	1524
Mva1269I	GAATGC	2 cut(s)	307, 1191
MvaI	CCWGG	5 cut(s)	316, 745, 926, 1077, 2618
NciI	CCSGG	1 cut(s)	1374
NcoI	CCATGG	1 cut(s)	1207
NdeI	CATATG	2 cut(s)	1639, 2752
NheI	GCTAGC	1 cut(s)	209
NlaIV	GGNNCC	4 cut(s)	2063, 2121, 2334, 2442
NsbI	TGCGCA	1 cut(s)	48
NsiI	ATGCAT	2 cut(s)	1627, 1984
NspI	RCATGY	4 cut(s)	223, 254, 1417, 1615
PaeI	GCATGC	1 cut(s)	254
PaeR7I	CTCGAG	1 cut(s)	260
PagI	TCATGA	2 cut(s)	76, 1174
PceI	AGGCCT	1 cut(s)	541
PciI	ACATGT	3 cut(s)	219, 1413, 1611
PctI	GAATGC	2 cut(s)	307, 1191
PflMI	CCANNNNNTGG	2 cut(s)	2098, 2311
PleI	GAGTC	2 cut(s)	487, 1582
PpsI	GAGTC	2 cut(s)	487, 1582
Ppu21I	YACGTR	2 cut(s)	397, 2042
PscI	ACATGT	3 cut(s)	219, 1413, 1611
PshBI	ATTAAT	1 cut(s)	807
Psp6I	CCWGG	5 cut(s)	314, 743, 924, 1075, 2616
PspGI	CCWGG	5 cut(s)	314, 743, 924, 1075, 2616
PspN4I	GGNNCC	4 cut(s)	2063, 2121, 2334, 2442
PspPI	GGNCC	2 cut(s)	820, 2014
PstNI	CAGNNNCTG	5 cut(s)	2098, 2233, 2311, 2623, 2680
PsuI	RGATCY	4 cut(s)	373, 759, 1142, 2719
PvuII	CAGCTG	1 cut(s)	668
RsaI	GTAC	9 cut(s)	98, 963, 1477, 1675, 1940, 2032, 2371, 2479, 2729
RsaNI	GTAC	9 cut(s)	97, 962, 1476, 1674, 1939, 2031, 2370, 2478, 2728
RseI	CAYNNNNRTG	3 cut(s)	218, 777, 1763
Sau96I	GGNCC	2 cut(s)	820, 2014
SchI	GAGTC	2 cut(s)	488, 1582
ScrFI	CCNGG	6 cut(s)	316, 745, 926, 1077, 1374, 2618
SduI	GDGCHC	4 cut(s)	1693, 2361, 2469, 2673
SfaNI	GCATC	7 cut(s)	113, 161, 618, 659, 1468, 1945, 1991
SfcI	CTRYAG	3 cut(s)	604, 1180, 1553
Sfr274I	CTCGAG	1 cut(s)	260
SinI	GGWCC	2 cut(s)	820, 2014
SlaI	CTCGAG	1 cut(s)	260
SmiMI	CAYNNNNRTG	3 cut(s)	218, 777, 1763
SmlI	CTYRAG	5 cut(s)	260, 350, 1201, 1547, 1904
SmoI	CTYRAG	5 cut(s)	260, 350, 1201, 1547, 1904
SpeI	ACTAGT	2 cut(s)	199, 1001
SphI	GCATGC	1 cut(s)	254
SseBI	AGGCCT	1 cut(s)	541
SspI	AATATT	2 cut(s)	1338, 1826
StuI	AGGCCT	1 cut(s)	541
StyD4I	CCNGG	6 cut(s)	314, 743, 924, 1075, 1372, 2616
StyI	CCWWGG	2 cut(s)	855, 1207
TaiI	ACGT	4 cut(s)	399, 805, 1385, 2044
TaqI	TCGA	9 cut(s)	72, 144, 261, 612, 1148, 1167, 1586, 2394, 2502
TatI	WGTACW	7 cut(s)	96, 1475, 1673, 1938, 2369, 2477, 2727
TspGWI	ACGGA	1 cut(s)	1242
Van91I	CCANNNNNTGG	2 cut(s)	2098, 2311
VpaK11BI	GGWCC	2 cut(s)	820, 2014
VspI	ATTAAT	1 cut(s)	807
XagI	CCTNNNNNAGG	1 cut(s)	546
XapI	RAATTY	5 cut(s)	41, 910, 1129, 1768, 2288
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	4 cut(s)	223, 254, 1417, 1615
XhoI	CTCGAG	1 cut(s)	260
XmiI	GTMKAC	3 cut(s)	399, 1062, 2598
ZraI	GACGTC	1 cut(s)	1383
Zsp2I	ATGCAT	2 cut(s)	1627, 1984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.