Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0017654

Physical Location & Seq

Genomic Coordinates Reverse (-)

9673920 .. 9677951

Gene Structure 4032 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006691

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2727 bp

ATGGACAACATGAGTTTTATAGAGACTGACGGTATTCCTGAATTTGCGCACGGCCTTAAAATCCTGCTGTTCGATCATGACACATTTTCCCTCATGTACACAGCATCAGTGCTTGAACGATACTCATTCAATGTTACTGCAATCGAGCAGGCATCTGTCGCTTTGTCCATGATTAGTGAACAAAAGGATCACTATGAACTAGTAATGGCTAGCATTAACATGTCTGATATTGAGAGTGTTTCTTTTCTGCATGCACTGCTCGAAAAGGATATTCCTGTCATATTGATCTCCTCTGCAATGAACGCTGATATAACCAGGAAAGCCCTAGACAAAGGAGCAAGCAATATCCTTGAGAAACCCATTCCTTTGGAGGATCTGAAAAATGTGTGGAGACACGTATACAGGAAGACAAACCCAATGAAGGACACAGGTAAACCAAATTGTGAAGAAAAGATAGACTGGCCAAAGGACTATCAAGAGTCTTCAGTGCTTAGACCTTCCTTTGGAGGTATTGAAACCAAGGAGGATGGTGCATTGTGTAGACCTGATACAGGGCATTATTGGAATGGCACTGGCCTTGAAACTGATCTAGAAGGTTTGCATAGCTATAGCATCGAAGAGTTGTTCCCAACAGAGAGACAAAAACAAAAAGCATCTGGGATGAATCCAGCTGATGATACCGAAGAACAAGGAAAACAAAAAAAATTGAAACCAACTGTAGAGCAAACTGATTCTGACAGTATAGCCAGGAATCAGGAATGGATCTCCAAGAAACATAGCAATGACAAAACAGATAAGAAAGAACGTATTAATTGGACTTCAGACCTGCATTTCAAGTTTACAACAGCAATAAGTGCCTTGGGAGATCAGAAAGCTCGTCCTAAAGCAATTATGAATATGATGGGGGTGGAGAATTTAACAATGCGCCAGGTTGCAAGCCATCTTCAGAAATACAAAAATCAAGTACGGCGAATTAACGAGACCGGCATATTTACTGGAAGAACTAGTTTAAGCAAAGTTTCTGGTGGGAATGAGTTTGTGCCAGCAAAGCAAAGTTCTCTGGTATACCAGAAGAAACCAGGGACTTCAAGGTTTGGAGTAGGAGGTAAACCAACTGAATCAACTACTCCAAATTCTTTGACCAGATCTTCGCTCTCTGTAGCTAGATTCGACAATCATGACTACAGAATGCAGAATCTAAACTCAAGCCATGGAGGCTTGTCTCGCTACGGAAATACCAATAGCCCCAATGATTCTCTAAGAACTGATGGTTGGTTTCAAAATATGAACCAGATACCAGAAACAAGCAGTTTTGCATACAAAACTGGCATTGGCATGAAGGAAATATTGAAGAAAAAACTGAAAGTAACTGAAAAGTTACCGGGCATGACGTACATGACTTCAGAGGTTGATCCTCCCAACATGTCAACCAAGACATTCCATCTCCCCAATGAGCCTCCTGCCGTGCATCAAAAGCAAAATTGTACTCCGGCTTTGACTGATCCCTTCAAATCCATAAACAAGGAAACACCAATTGCAGGAACAACAGAAGTGCTTGAGCTACAGAAGATGAACCTGCCAGGTATGAACTACTCGACTCCAGAGGCAGATTCTCCTTACATGTCGGCAAATGCATTTCAGTTCTCAAATGAGGTTTCAGTTGCGAATCAAGAGCAAAATTGTACTCTAATTGTAAGTGCTCCCATGAACTCTGAAACTTGGGACGAGTTTTCAACAGAAGATCAACGAAGTGAATTATTTGAGCCCATACCAATGAATTTACCAAGCATGATTTACATGACACCAGACAGTGCTTCTGTGAACCAAGAGCAATATTATGCTCCAGTAAATTCCTCCAGTTCCGAAACTCAGAACAGTTTTTCAACAGAAGTTGCAGGAACAAATGAACTACTTGAGCTTCTGCTAAAGGATTCACCTAGTGTGGAGTACATGACTACTAAGGATGCTTCTCCCCACAAATCAGAAAATGCATCTCAGCTCCCGAATGAGCCTCTCAACATGGACCTAGAACAATACCGAACTCCTCCACGTAATGCTAACAGTCTAGGGAACCTTCCAGCAAACTTCAACGATGGAAGCCAGAAGCTGGACACTCTAGCAGGAGAGGCACCTCCTGCGATTTTATCAAATGACCACCAGCACTATACTCCAGCTTTCACTGTTCCATTCGCTTTCCAAAATCAGAACAAGGTTTCTCCAGTAACAACTGAACTTCAGCTTCTGGAGGAGCAAGCAGCTTCAAGCAATGCAAAAAACTTACAGAACATCCCAACAAAATTCAACAGTGGAAGCCAGAAGCTGGATACTATAACCGGAGAGGCACCTCCTGCGGTTTCATTAAATGAGCACCAGCACTGTACTCCATCTCTCACCGTTCCATTCGATTCCCAAAATCAGAACAAGGTTTCTCCAGTAACAACTGAATTGGGGGAACAAAAAGCTTCAAGCAATGCAAAAGATATAGAGAACCTTCCAGTATACTTCAACAGTGGAAGCCAGGAGCTGAATAATTTAACAGGAGACGCTCCTCCAGCTGTTTCATCAAATGAGCACCAGCCACTGTCGGAGTATGCTGACCTGTTGAAAATGCTTGAAGCAGATCCGGAGTACAGTTCTTTTGGCAATGCACCATATGCAGGCAATTTTGATGAATACCGTGAATGGCTGGAGAGATCTTTATTTGGAGATAGCACACAACAACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

909

Amino Acids

101.08

Weight (kDa)

5.09

Isoelectric Point (pI)

48.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	21 - 128	1.4e-11	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g26570
malus_domestica	MD13G1034600.v1.1 MD16G1036100.v1.1
prunus_persica	Prupe.1G317900_v2.0.a1
rosa_laevigata	RLG00000006691
rosa_multiflora	Rmu_sc0000459.1_g000011
rosa_roxburghii	Rroxscaffold_5G00375600
rosa_samantha	Rh4AG330200 Rh4BG337800 Rh4CG353200 Rh4DG333800
rosa_wichuraiana	Rw4G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	48
Acc36I	ACCTGC	2 cut(s)	834, 1584
AccB1I	GGYRCC	2 cut(s)	2128, 2341
AccB7I	CCANNNNNTGG	2 cut(s)	2107, 2320
AccI	GTMKAC	4 cut(s)	399, 541, 1065, 2499
AccIII	TCCGGA	1 cut(s)	2623
AciI	CCGC	1 cut(s)	2351
AclWI	GGATC	6 cut(s)	195, 381, 770, 1406, 1496, 2615
AcoI	YGGCCR	1 cut(s)	461
AcsI	RAATTY	6 cut(s)	41, 913, 1132, 1777, 1849, 2297
AcuI	CTGAAG	5 cut(s)	468, 804, 929, 1386, 2219
AdeI	CACNNNGTG	1 cut(s)	1940
AfaI	GTAC	8 cut(s)	98, 966, 1394, 1486, 1684, 1949, 2380, 2630
AfiI	CCNNNNNNNGG	7 cut(s)	421, 503, 551, 1538, 2107, 2320, 2657
AflIII	ACRYGT	4 cut(s)	219, 394, 1422, 1620
AhlI	ACTAGT	2 cut(s)	199, 1004
AjnI	CCWGG	6 cut(s)	314, 746, 927, 1078, 1579, 2517
AjuI	GAANNNNNNNTTGG	2 cut(s)	1255, 1287
Alw21I	GWGCWC	3 cut(s)	1702, 2370, 2574
Alw26I	GTCTC	6 cut(s)	17, 385, 631, 974, 1227, 2535
AlwI	GGATC	6 cut(s)	195, 381, 770, 1406, 1496, 2615
AlwNI	CAGNNNCTG	5 cut(s)	2107, 2242, 2320, 2524, 2581
Aor13HI	TCCGGA	1 cut(s)	2623
AoxI	GGCC	3 cut(s)	52, 461, 574
ApeKI	GCWGC	1 cut(s)	2255
ApoI	RAATTY	6 cut(s)	41, 913, 1132, 1777, 1849, 2297
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AseI	ATTAAT	1 cut(s)	810
AspLEI	GCGC	2 cut(s)	49, 927
AspS9I	GGNCC	1 cut(s)	2023
AsuC2I	CCSGG	1 cut(s)	1383
AsuHPI	GGTGA	2 cut(s)	1926, 2383
AsuNHI	GCTAGC	1 cut(s)	209
AvaII	GGWCC	1 cut(s)	2023
BalI	TGGCCA	1 cut(s)	463
BanI	GGYRCC	2 cut(s)	2128, 2341
BanII	GRGCYC	1 cut(s)	1767
BbsI	GAAGAC	2 cut(s)	413, 474
Bbv12I	GWGCWC	3 cut(s)	1702, 2370, 2574
BbvI	GCAGC	1 cut(s)	2267
BccI	CCATC	7 cut(s)	521, 895, 948, 1262, 1449, 2087, 2392
BceAI	ACGGC	3 cut(s)	67, 983, 1448
BciT130I	CCWGG	6 cut(s)	316, 748, 929, 1080, 1581, 2519
BciVI	GTATCC	1 cut(s)	2317
BcnI	CCSGG	1 cut(s)	1383
BcoDI	GTCTC	6 cut(s)	17, 385, 631, 974, 1227, 2535
BcuI	ACTAGT	2 cut(s)	199, 1004
BfmI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1562
BfuAI	ACCTGC	2 cut(s)	834, 1584
BfuI	GTATCC	1 cut(s)	2317
BglI	GCCNNNNNGGC	1 cut(s)	1215
BglII	AGATCT	2 cut(s)	1145, 2693
BisI	GCNGC	1 cut(s)	2256
BlsI	GCNGC	1 cut(s)	2257
Bme1390I	CCNGG	7 cut(s)	316, 748, 929, 1080, 1383, 1581, 2519
Bme18I	GGWCC	1 cut(s)	2023
BmgT120I	GGNCC	1 cut(s)	2023
BmiI	GGNNCC	3 cut(s)	2072, 2130, 2343
BmrFI	CCNGG	7 cut(s)	316, 748, 929, 1080, 1383, 1581, 2519
BmsI	GCATC	7 cut(s)	113, 161, 621, 662, 1477, 1954, 2000
BmtI	GCTAGC	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	413, 474
BpmI	CTGGAG	9 cut(s)	1584, 1827, 1840, 2154, 2202, 2264, 2415, 2535, 2708
BpuEI	CTTGAG	4 cut(s)	371, 1189, 1577, 1934
BpuMI	CCSGG	1 cut(s)	1383
BsaAI	YACGTR	2 cut(s)	397, 2051
BsaI	GGTCTC	1 cut(s)	974
BsaJI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BsaWI	WCCGGW	2 cut(s)	2333, 2623
Bsc4I	CCNNNNNNNGG	7 cut(s)	421, 503, 551, 1538, 2107, 2320, 2657
Bse118I	RCCGGY	1 cut(s)	983
Bse1I	ACTGG	9 cut(s)	464, 577, 1000, 1330, 1844, 1857, 2219, 2432, 2495
Bse3DI	GCAATG	5 cut(s)	303, 787, 2272, 2476, 2650
BseAI	TCCGGA	1 cut(s)	2623
BseBI	CCWGG	6 cut(s)	316, 748, 929, 1080, 1581, 2519
BseDI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BseGI	GGATG	4 cut(s)	532, 666, 1969, 2286
BseLI	CCNNNNNNNGG	7 cut(s)	421, 503, 551, 1538, 2107, 2320, 2657
BseMI	GCAATG	5 cut(s)	303, 787, 2272, 2476, 2650
BseMII	CTCAG	2 cut(s)	1883, 2009
BseNI	ACTGG	9 cut(s)	464, 577, 1000, 1330, 1844, 1857, 2219, 2432, 2495
BseRI	GAGGAG	4 cut(s)	280, 2034, 2261, 2538
BseXI	GCAGC	1 cut(s)	2267
BshFI	GGCC	3 cut(s)	54, 463, 576
BshNI	GGYRCC	2 cut(s)	2128, 2341
BsiHKAI	GWGCWC	3 cut(s)	1702, 2370, 2574
BsiSI	CCGG	5 cut(s)	984, 1382, 1490, 2334, 2624
BslFI	GGGAC	2 cut(s)	1096, 1736
BslI	CCNNNNNNNGG	7 cut(s)	421, 503, 551, 1538, 2107, 2320, 2657
BsmAI	GTCTC	6 cut(s)	17, 385, 631, 974, 1227, 2535
BsmBI	CGTCTC	1 cut(s)	2535
BsmFI	GGGAC	2 cut(s)	1096, 1736
BsmI	GAATGC	1 cut(s)	1194
BsnI	GGCC	3 cut(s)	54, 463, 576
Bso31I	GGTCTC	1 cut(s)	974
Bsp1286I	GDGCHC	4 cut(s)	1702, 1767, 2370, 2574
Bsp13I	TCCGGA	1 cut(s)	2623
Bsp1407I	TGTACA	1 cut(s)	96
Bsp19I	CCATGG	1 cut(s)	1210
BspACI	CCGC	1 cut(s)	2351
BspANI	GGCC	3 cut(s)	54, 463, 576
BspCNI	CTCAG	2 cut(s)	1882, 2008
BspEI	TCCGGA	1 cut(s)	2623
BspHI	TCATGA	2 cut(s)	76, 1177
BspLI	GGNNCC	3 cut(s)	2072, 2130, 2343
BspMI	ACCTGC	2 cut(s)	834, 1584
BspOI	GCTAGC	1 cut(s)	213
BspPI	GGATC	6 cut(s)	195, 381, 770, 1406, 1496, 2615
BspT107I	GGYRCC	2 cut(s)	2128, 2341
BspTNI	GGTCTC	1 cut(s)	974
BsrDI	GCAATG	5 cut(s)	303, 787, 2272, 2476, 2650
BsrFI	RCCGGY	1 cut(s)	983
BsrGI	TGTACA	1 cut(s)	96
BsrI	ACTGG	9 cut(s)	464, 577, 1000, 1330, 1844, 1857, 2219, 2432, 2495
BssAI	RCCGGY	1 cut(s)	983
BssECI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BssNAI	GTATAC	3 cut(s)	400, 1066, 2500
BssT1I	CCWWGG	3 cut(s)	519, 858, 1210
Bst1107I	GTATAC	3 cut(s)	400, 1066, 2500
Bst2UI	CCWGG	6 cut(s)	316, 748, 929, 1080, 1581, 2519
Bst6I	CTCTTC	1 cut(s)	612
BstAPI	GCANNNNNTGC	5 cut(s)	256, 854, 2135, 2348, 2654
BstAUI	TGTACA	1 cut(s)	96
BstBAI	YACGTR	2 cut(s)	397, 2051
BstC8I	GCNNGC	8 cut(s)	150, 211, 252, 340, 937, 1044, 2253, 2659
BstDEI	CTNAG	5 cut(s)	491, 1259, 1869, 1959, 1995
BstDSI	CCRYGG	1 cut(s)	1210
BstENI	CCTNNNNNAGG	1 cut(s)	549
BstF5I	GGATG	4 cut(s)	532, 666, 1969, 2286
BstHHI	GCGC	2 cut(s)	49, 927
BstMAI	GTCTC	6 cut(s)	17, 385, 631, 974, 1227, 2535
BstNI	CCWGG	6 cut(s)	316, 748, 929, 1080, 1581, 2519
BstNSI	RCATGY	4 cut(s)	223, 254, 1426, 1624
BstSCI	CCNGG	7 cut(s)	314, 746, 927, 1078, 1381, 1579, 2517
BstSFI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1562
BstV1I	GCAGC	1 cut(s)	2267
BstV2I	GAAGAC	2 cut(s)	413, 474
BstX2I	RGATCY	5 cut(s)	373, 762, 1145, 2620, 2693
BstXI	CCANNNNNNTGG	1 cut(s)	367
BstYI	RGATCY	5 cut(s)	373, 762, 1145, 2620, 2693
BstZ17I	GTATAC	3 cut(s)	400, 1066, 2500
BsuI	GTATCC	1 cut(s)	2317
BsuRI	GGCC	3 cut(s)	54, 463, 576
BtgI	CCRYGG	1 cut(s)	1210
BtsCI	GGATG	4 cut(s)	532, 666, 1969, 2286
BtsI	GCAGTG	1 cut(s)	254
BveI	ACCTGC	2 cut(s)	834, 1584
Cac8I	GCNNGC	8 cut(s)	150, 211, 252, 340, 937, 1044, 2253, 2659
CaiI	CAGNNNCTG	5 cut(s)	2107, 2242, 2320, 2524, 2581
CciI	TCATGA	2 cut(s)	76, 1177
CfoI	GCGC	2 cut(s)	49, 927
Cfr10I	RCCGGY	1 cut(s)	983
Cfr13I	GGNCC	1 cut(s)	2023
CseI	GACGC	1 cut(s)	2552
Csp6I	GTAC	8 cut(s)	97, 965, 1393, 1485, 1683, 1948, 2379, 2629
CviQI	GTAC	8 cut(s)	97, 965, 1393, 1485, 1683, 1948, 2379, 2629
DdeI	CTNAG	5 cut(s)	491, 1259, 1869, 1959, 1995
DraIII	CACNNNGTG	1 cut(s)	1940
EaeI	YGGCCR	1 cut(s)	461
Eam1104I	CTCTTC	1 cut(s)	612
EarI	CTCTTC	1 cut(s)	612
Eco130I	CCWWGG	3 cut(s)	519, 858, 1210
Eco24I	GRGCYC	1 cut(s)	1767
Eco31I	GGTCTC	1 cut(s)	974
Eco47I	GGWCC	1 cut(s)	2023
Eco57I	CTGAAG	5 cut(s)	468, 804, 929, 1386, 2219
EcoNI	CCTNNNNNAGG	1 cut(s)	549
EcoRII	CCWGG	6 cut(s)	314, 746, 927, 1078, 1579, 2517
EcoT14I	CCWWGG	3 cut(s)	519, 858, 1210
EcoT22I	ATGCAT	2 cut(s)	1636, 1993
EcoT38I	GRGCYC	1 cut(s)	1767
ErhI	CCWWGG	3 cut(s)	519, 858, 1210
Esp3I	CGTCTC	1 cut(s)	2535
FaqI	GGGAC	2 cut(s)	1096, 1736
FauNDI	CATATG	1 cut(s)	2653
FblI	GTMKAC	4 cut(s)	399, 541, 1065, 2499
Fnu4HI	GCNGC	1 cut(s)	2256
FokI	GGATG	4 cut(s)	539, 673, 1976, 2273
FriOI	GRGCYC	1 cut(s)	1767
Fsp4HI	GCNGC	1 cut(s)	2256
FspI	TGCGCA	1 cut(s)	48
GlaI	GCGC	2 cut(s)	48, 926
GluI	GCNGC	1 cut(s)	2256
GsuI	CTGGAG	9 cut(s)	1584, 1827, 1840, 2154, 2202, 2264, 2415, 2535, 2708
HaeIII	GGCC	3 cut(s)	54, 463, 576
HapII	CCGG	5 cut(s)	984, 1382, 1490, 2334, 2624
HgaI	GACGC	1 cut(s)	2552
HhaI	GCGC	2 cut(s)	49, 927
Hin6I	GCGC	2 cut(s)	47, 925
HinP1I	GCGC	2 cut(s)	47, 925
HincII	GTYRAC	1 cut(s)	1428
HindII	GTYRAC	1 cut(s)	1428
HindIII	AAGCTT	1 cut(s)	2460
HpaII	CCGG	5 cut(s)	984, 1382, 1490, 2334, 2624
HphI	GGTGA	2 cut(s)	1926, 2383
HpyAV	CCTTC	7 cut(s)	415, 507, 587, 1333, 1516, 2084, 2501
HpyCH4IV	ACGT	4 cut(s)	396, 805, 1391, 2050
HpyF3I	CTNAG	5 cut(s)	491, 1259, 1869, 1959, 1995
HpySE526I	ACGT	4 cut(s)	396, 805, 1391, 2050
HspAI	GCGC	2 cut(s)	47, 925
Kpn2I	TCCGGA	1 cut(s)	2623
LmnI	GCTCC	7 cut(s)	335, 1705, 1846, 2004, 2248, 2521, 2551
Lsp1109I	GCAGC	1 cut(s)	2267
LweI	GCATC	7 cut(s)	113, 161, 621, 662, 1477, 1954, 2000
MaeII	ACGT	4 cut(s)	396, 805, 1391, 2050
MaeIII	GTNAC	5 cut(s)	133, 1366, 1377, 2221, 2434
MfeI	CAATTG	1 cut(s)	1533
MflI	RGATCY	5 cut(s)	373, 762, 1145, 2620, 2693
MhlI	GDGCHC	4 cut(s)	1702, 1767, 2370, 2574
MlsI	TGGCCA	1 cut(s)	463
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	2 cut(s)	488, 1591
MmeI	TCCRAC	1 cut(s)	2565
Mox20I	TGGCCA	1 cut(s)	463
Mph1103I	ATGCAT	2 cut(s)	1636, 1993
MroI	TCCGGA	1 cut(s)	2623
MscI	TGGCCA	1 cut(s)	463
MseI	TTAA	8 cut(s)	57, 216, 810, 917, 975, 1010, 2360, 2534
MslI	CAYNNNNRTG	4 cut(s)	218, 780, 1334, 1772
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	2 cut(s)	671, 2555
MspI	CCGG	5 cut(s)	984, 1382, 1490, 2334, 2624
MspR9I	CCNGG	7 cut(s)	316, 748, 929, 1080, 1383, 1581, 2519
MunI	CAATTG	1 cut(s)	1533
Mva1269I	GAATGC	1 cut(s)	1194
MvaI	CCWGG	6 cut(s)	316, 748, 929, 1080, 1581, 2519
NciI	CCSGG	1 cut(s)	1383
NcoI	CCATGG	1 cut(s)	1210
NdeI	CATATG	1 cut(s)	2653
NheI	GCTAGC	1 cut(s)	209
NlaIV	GGNNCC	3 cut(s)	2072, 2130, 2343
NsbI	TGCGCA	1 cut(s)	48
NsiI	ATGCAT	2 cut(s)	1636, 1993
NspI	RCATGY	4 cut(s)	223, 254, 1426, 1624
PaeI	GCATGC	1 cut(s)	254
PagI	TCATGA	2 cut(s)	76, 1177
PciI	ACATGT	3 cut(s)	219, 1422, 1620
PctI	GAATGC	1 cut(s)	1194
PflMI	CCANNNNNTGG	2 cut(s)	2107, 2320
PkrI	GCNGC	1 cut(s)	2257
PleI	GAGTC	2 cut(s)	487, 1591
PpsI	GAGTC	2 cut(s)	487, 1591
Ppu21I	YACGTR	2 cut(s)	397, 2051
PscI	ACATGT	3 cut(s)	219, 1422, 1620
PshBI	ATTAAT	1 cut(s)	810
Psp6I	CCWGG	6 cut(s)	314, 746, 927, 1078, 1579, 2517
PspGI	CCWGG	6 cut(s)	314, 746, 927, 1078, 1579, 2517
PspN4I	GGNNCC	3 cut(s)	2072, 2130, 2343
PspPI	GGNCC	1 cut(s)	2023
PstNI	CAGNNNCTG	5 cut(s)	2107, 2242, 2320, 2524, 2581
PsuI	RGATCY	5 cut(s)	373, 762, 1145, 2620, 2693
PvuII	CAGCTG	2 cut(s)	671, 2555
RsaI	GTAC	8 cut(s)	98, 966, 1394, 1486, 1684, 1949, 2380, 2630
RsaNI	GTAC	8 cut(s)	97, 965, 1393, 1485, 1683, 1948, 2379, 2629
RseI	CAYNNNNRTG	4 cut(s)	218, 780, 1334, 1772
SaqAI	TTAA	8 cut(s)	57, 216, 810, 917, 975, 1010, 2360, 2534
SatI	GCNGC	1 cut(s)	2256
Sau96I	GGNCC	1 cut(s)	2023
SchI	GAGTC	2 cut(s)	488, 1591
ScrFI	CCNGG	7 cut(s)	316, 748, 929, 1080, 1383, 1581, 2519
SduI	GDGCHC	4 cut(s)	1702, 1767, 2370, 2574
SfaNI	GCATC	7 cut(s)	113, 161, 621, 662, 1477, 1954, 2000
SfcI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1562
SinI	GGWCC	1 cut(s)	2023
SmiMI	CAYNNNNRTG	4 cut(s)	218, 780, 1334, 1772
SmlI	CTYRAG	4 cut(s)	350, 1204, 1556, 1913
SmoI	CTYRAG	4 cut(s)	350, 1204, 1556, 1913
SpeI	ACTAGT	2 cut(s)	199, 1004
SphI	GCATGC	1 cut(s)	254
SsiI	CCGC	1 cut(s)	2351
SspI	AATATT	2 cut(s)	1347, 1835
StyD4I	CCNGG	7 cut(s)	314, 746, 927, 1078, 1381, 1579, 2517
StyI	CCWWGG	3 cut(s)	519, 858, 1210
TaiI	ACGT	4 cut(s)	399, 808, 1394, 2053
TaqI	TCGA	7 cut(s)	72, 144, 261, 615, 1170, 1595, 2403
TatI	WGTACW	6 cut(s)	96, 1484, 1682, 1947, 2378, 2628
Tru1I	TTAA	8 cut(s)	57, 216, 810, 917, 975, 1010, 2360, 2534
Tru9I	TTAA	8 cut(s)	57, 216, 810, 917, 975, 1010, 2360, 2534
TseI	GCWGC	1 cut(s)	2255
TspGWI	ACGGA	1 cut(s)	1245
Van91I	CCANNNNNTGG	2 cut(s)	2107, 2320
VpaK11BI	GGWCC	1 cut(s)	2023
VspI	ATTAAT	1 cut(s)	810
XagI	CCTNNNNNAGG	1 cut(s)	549
XapI	RAATTY	6 cut(s)	41, 913, 1132, 1777, 1849, 2297
XbaI	TCTAGA	1 cut(s)	589
XceI	RCATGY	4 cut(s)	223, 254, 1426, 1624
XmiI	GTMKAC	4 cut(s)	399, 541, 1065, 2499
Zsp2I	ATGCAT	2 cut(s)	1636, 1993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.