Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0017654

Physical Location & Seq

Genomic Coordinates Forward (+)

56375980 .. 56378764

Gene Structure 2785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00375600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGAAGGACACAGCTAAACCAAATTGTGAAGAAAAGATAGACTGGCCAAAGGACTATCAAGAGTCTTCAATGCTTGGACCTTCCCTTGGAGGTATTGAAACCAAGGAGGATGGTGCATTGTGTAGGCCTGATACAGGGCATTATTGGAATGGCACTGGCCTTGAAACTGATCAAGAAGGTTTGCATAGCTATAGCATCGAAGGTTTGTTCCCAAAAGAGAGCCAAAAACAAAAAGCATCTGGGATGAAGCCAGCTGATGATACCGAAGAACAAGGAAAACAAAAAAAATTGAAACCAACTGTAGAGCAAACTGATTCTGACAGTATAGCCAGGAATCAGGAAGGCATCTCCAAGAAACATAGCAATGACAAAACAGACAAGAAAGAACGTATTAATTGGACTTCGGACCTGCATTTCAAGTTTACAACAGCAATAAGTGCCTTGGGAGATCAGAAAGCCCGTCCTAAAGCGATTATGAACATGATGGGTGTGGAGAATTTAACAATGCGCCAGGTTGCAAGCCATCTTCAGAAATACAAAAATCAAGTACGGCGAATTAACGAGACTGGCATATTTACTGGAAGAACTAGTTTAAGCAAAGTTTCTGGTGGGAATGAGTTTGTGCCACCAAAGCAAAGTTCTCTGGTATACCAGAAGAAACCAGGGACTCCAAGGTTTGGAGTAGGAGGTAAACCAACAGAATCAACTACTCCAAATTCCTTGACCAGAACTTCGATCTCTGTAGCTAGTTTCGACAATCATGACTACAGAATGCAGAATCTAAACTCAAGCCATGGAGGCTTGTCTCGCTACGGAAATACCAATAGCCTCAATGATTCTCTAAGAACTGATGGTTGGTTTCAAAATATGAACCAGATACCAGAAACAAGCAGTTTTGCATACAAAACTGGCATGAAGGAAATATTGAAGAAAAAACTGAAAGTAACTGAAAACTTACCGGGCATGACGTACATGACTTCAGAGGTTGATCCTCCCAACATGTCAACCAAGACATTCCAGCTCCCCGACGAGCCTCCTGCCGTGCAACGAAAGCAAAATTGTACTCCTGCTTTGACTGATCCCTTCAATTCCATAAACAAGGAAACACCAATTGCAGGAACAACAGAAGTGCTTGAGCTACAGAAGATGAACCTACCAAGTATGAACTACTCGACTCCAGAGGCAGATTCTCCTTACATGTCGGCAAATGCATTTCAGTTCTCAAATGAGGTTTCGGTCGCGAATCAAGAGCAAAATTGTACTCTAATTGTAAGTGCTCCCATGAACTCTGAAACTCGGGACAAGTTTTCAACAGAAGATCAACGAAGTGAATTATTTGAGACCATGCCAATGAATTTACCAAGCATGATTTACATGACACCAGACAGTGCTTCTGTGAACCAAGAGCAATATTATGCTCCAGTTAATTCCTCCAGTTCCGAAACTCAGAACAGTTTTTCAACAGAAGTTGCAGGAACAAATGAACTACTTGAGCTTCTGCTAAAGGATTCACCTAGTGTGGAGTACATGAGTACTGAGGATGCTTTTCCCCAAAAATCAGAAAATGCATCTCAGCTCCCGAATGAGCCTCTCAACATGGACCTAGAACAATACCGTACCCCTTCACGTAATGCTAACAATCTAGGGAATCTTCCAGCAAACTTCAACGATGGAAGCCAGAAGCTGGACACTCTAGCAGGAGAGGCACCTCCTGCAATTTTATCAAATTGCCACCAGCACTATACTCCAGCTTTCAGTGTTCCATTTGCTTTCCAAAATCAGAACAAGGTTTCTCCAGCAACAACTGAACTTCAGCCTCTGGAGGAGCAAATAGCTTCAAGCAATGCAAAAAACTTACAGAACTTTCCAACAAACTTCAACAGTGGAAGCCAGAAGCTGGATACTGTAACAGGAGAGGCACCTCCTGCGATTTCATTAGATGAGCACCAGCACGATACTCAATCTTTCACCGTTCCATTCGATTCCCAAAATCAGAACAAGGTTTCTCCAGTAACAACTGAATTGGGGGAACAAAAAGCTTCAAGCAATGCAAAAGATCTAGAGAACCTTACGGTATGCTTCAATAGTGGAAGCCAGGAGCTGAATAATTTAACAGGAGACGCTCCTCCAGCTATTTCATCAAATGAGCACCAGCCACTGTCGGAGTATGCTGACCTGTTGAAAATGCTTGAAGCAGATCCGGAGTACAATTCTTTTGGCAATGCACCATATGCAGGCAATTTTGATGAATACCAAGAATGGCTGGAGAGATCTTTATTTGGAGATAGCACAGAACAACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

767

Amino Acids

84.99

Weight (kDa)

4.9

Isoelectric Point (pI)

49.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g26570
malus_domestica	MD13G1034600.v1.1 MD16G1036100.v1.1
prunus_persica	Prupe.1G317900_v2.0.a1
rosa_laevigata	RLG00000006691
rosa_multiflora	Rmu_sc0000459.1_g000011
rosa_roxburghii	Rroxscaffold_5G00375600
rosa_samantha	Rh4AG330200 Rh4BG337800 Rh4CG353200 Rh4DG333800
rosa_wichuraiana	Rw4G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	417
AccB1I	GGYRCC	2 cut(s)	1705, 1918
AccB7I	CCANNNNNTGG	3 cut(s)	677, 1684, 1897
AccI	GTMKAC	1 cut(s)	648
AccII	CGCG	1 cut(s)	1241
AccIII	TCCGGA	1 cut(s)	2200
AclWI	GGATC	3 cut(s)	983, 1073, 2192
AcoI	YGGCCR	1 cut(s)	44
AcsI	RAATTY	3 cut(s)	496, 715, 1354
AcuI	CTGAAG	3 cut(s)	512, 963, 1796
AdeI	CACNNNGTG	1 cut(s)	1517
AfaI	GTAC	8 cut(s)	549, 971, 1063, 1261, 1526, 1534, 1618, 2207
AfiI	CCNNNNNNNGG	7 cut(s)	86, 134, 677, 1115, 1684, 1897, 2234
AflIII	ACRYGT	2 cut(s)	999, 1197
AhlI	ACTAGT	1 cut(s)	587
AjnI	CCWGG	4 cut(s)	329, 510, 661, 2094
AjuI	GAANNNNNNNTTGG	4 cut(s)	622, 654, 838, 870
Alw21I	GWGCWC	3 cut(s)	1279, 1947, 2151
Alw26I	GTCTC	4 cut(s)	557, 810, 1334, 2112
AlwI	GGATC	3 cut(s)	983, 1073, 2192
AlwNI	CAGNNNCTG	5 cut(s)	1684, 1819, 1897, 2101, 2158
Ama87I	CYCGRG	1 cut(s)	1296
Aor13HI	TCCGGA	1 cut(s)	2200
AoxI	GGCC	3 cut(s)	44, 125, 157
ApoI	RAATTY	3 cut(s)	496, 715, 1354
ArsI	GACNNNNNNTTYG	2 cut(s)	715, 747
AseI	ATTAAT	1 cut(s)	393
AspLEI	GCGC	1 cut(s)	510
AspS9I	GGNCC	3 cut(s)	77, 406, 1600
AsuC2I	CCSGG	1 cut(s)	960
AsuHPI	GGTGA	2 cut(s)	1503, 1960
AvaI	CYCGRG	1 cut(s)	1296
AvaII	GGWCC	3 cut(s)	77, 406, 1600
BalI	TGGCCA	1 cut(s)	46
BanI	GGYRCC	2 cut(s)	1705, 1918
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	3 cut(s)	1279, 1947, 2151
BccI	CCATC	5 cut(s)	104, 478, 531, 845, 1664
BceAI	ACGGC	2 cut(s)	566, 1025
BcgI	CGANNNNNNTGC	2 cut(s)	1019, 1053
BciT130I	CCWGG	4 cut(s)	331, 512, 663, 2096
BciVI	GTATCC	1 cut(s)	1894
BclI	TGATCA	1 cut(s)	169
BcnI	CCSGG	1 cut(s)	960
BcoDI	GTCTC	4 cut(s)	557, 810, 1334, 2112
BcuI	ACTAGT	1 cut(s)	587
BfaI	CTAG	7 cut(s)	588, 747, 1515, 1604, 1643, 1694, 2060
BfmI	CTRYAG	5 cut(s)	190, 300, 741, 766, 1139
BfuAI	ACCTGC	1 cut(s)	417
BfuI	GTATCC	1 cut(s)	1894
BglI	GCCNNNNNGGC	1 cut(s)	798
BglII	AGATCT	2 cut(s)	2056, 2270
BmcAI	AGTACT	1 cut(s)	1534
Bme1390I	CCNGG	5 cut(s)	331, 512, 663, 960, 2096
Bme18I	GGWCC	3 cut(s)	77, 406, 1600
BmeT110I	CYCGRG	1 cut(s)	1296
BmgT120I	GGNCC	3 cut(s)	77, 406, 1600
BmiI	GGNNCC	2 cut(s)	1707, 1920
BmrFI	CCNGG	5 cut(s)	331, 512, 663, 960, 2096
BmsI	GCATC	5 cut(s)	204, 245, 354, 1531, 1577
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	9 cut(s)	1161, 1404, 1417, 1731, 1779, 1841, 1992, 2112, 2285
BpuEI	CTTGAG	3 cut(s)	772, 1154, 1511
BpuMI	CCSGG	1 cut(s)	960
BsaAI	YACGTR	1 cut(s)	1628
BsaI	GGTCTC	1 cut(s)	1334
BsaJI	CCNNGG	6 cut(s)	85, 102, 441, 662, 671, 793
BsaWI	WCCGGW	1 cut(s)	2200
Bsc4I	CCNNNNNNNGG	7 cut(s)	86, 134, 677, 1115, 1684, 1897, 2234
Bse1I	ACTGG	8 cut(s)	47, 160, 571, 583, 913, 1421, 1434, 2009
Bse3DI	GCAATG	4 cut(s)	370, 1849, 2053, 2227
BseAI	TCCGGA	1 cut(s)	2200
BseBI	CCWGG	4 cut(s)	331, 512, 663, 2096
BseDI	CCNNGG	6 cut(s)	85, 102, 441, 662, 671, 793
BseGI	GGATG	3 cut(s)	115, 249, 1546
BseLI	CCNNNNNNNGG	7 cut(s)	86, 134, 677, 1115, 1684, 1897, 2234
BseMI	GCAATG	4 cut(s)	370, 1849, 2053, 2227
BseMII	CTCAG	3 cut(s)	1460, 1527, 1586
BseNI	ACTGG	8 cut(s)	47, 160, 571, 583, 913, 1421, 1434, 2009
BseRI	GAGGAG	2 cut(s)	1838, 2115
Bsh1236I	CGCG	1 cut(s)	1241
Bsh1285I	CGRYCG	1 cut(s)	1239
BshFI	GGCC	3 cut(s)	46, 127, 159
BshNI	GGYRCC	2 cut(s)	1705, 1918
BsiEI	CGRYCG	1 cut(s)	1239
BsiHKAI	GWGCWC	3 cut(s)	1279, 1947, 2151
BsiHKCI	CYCGRG	1 cut(s)	1296
BsiSI	CCGG	2 cut(s)	959, 2201
BslFI	GGGAC	2 cut(s)	679, 1313
BslI	CCNNNNNNNGG	7 cut(s)	86, 134, 677, 1115, 1684, 1897, 2234
BsmAI	GTCTC	4 cut(s)	557, 810, 1334, 2112
BsmBI	CGTCTC	1 cut(s)	2112
BsmFI	GGGAC	2 cut(s)	679, 1313
BsmI	GAATGC	1 cut(s)	777
BsnI	GGCC	3 cut(s)	46, 127, 159
Bso31I	GGTCTC	1 cut(s)	1334
BsoBI	CYCGRG	1 cut(s)	1296
Bsp1286I	GDGCHC	3 cut(s)	1279, 1947, 2151
Bsp13I	TCCGGA	1 cut(s)	2200
Bsp143I	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
Bsp19I	CCATGG	1 cut(s)	793
Bsp68I	TCGCGA	1 cut(s)	1241
BspANI	GGCC	3 cut(s)	46, 127, 159
BspCNI	CTCAG	3 cut(s)	1459, 1528, 1585
BspEI	TCCGGA	1 cut(s)	2200
BspFNI	CGCG	1 cut(s)	1241
BspHI	TCATGA	1 cut(s)	760
BspLI	GGNNCC	2 cut(s)	1707, 1920
BspMI	ACCTGC	1 cut(s)	417
BspPI	GGATC	3 cut(s)	983, 1073, 2192
BspT107I	GGYRCC	2 cut(s)	1705, 1918
BspTNI	GGTCTC	1 cut(s)	1334
BsrDI	GCAATG	4 cut(s)	370, 1849, 2053, 2227
BsrI	ACTGG	8 cut(s)	47, 160, 571, 583, 913, 1421, 1434, 2009
BssECI	CCNNGG	6 cut(s)	85, 102, 441, 662, 671, 793
BssMI	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
BssNAI	GTATAC	1 cut(s)	649
BssT1I	CCWWGG	5 cut(s)	85, 102, 441, 671, 793
Bst1107I	GTATAC	1 cut(s)	649
Bst2UI	CCWGG	4 cut(s)	331, 512, 663, 2096
BstAPI	GCANNNNNTGC	4 cut(s)	437, 1712, 1925, 2231
BstBAI	YACGTR	1 cut(s)	1628
BstC8I	GCNNGC	3 cut(s)	252, 520, 2236
BstDEI	CTNAG	4 cut(s)	842, 1446, 1536, 1572
BstDSI	CCRYGG	1 cut(s)	793
BstENI	CCTNNNNNAGG	1 cut(s)	132
BstF5I	GGATG	3 cut(s)	115, 249, 1546
BstFNI	CGCG	1 cut(s)	1241
BstHHI	GCGC	1 cut(s)	510
BstKTI	GATC	9 cut(s)	172, 451, 738, 991, 1081, 1321, 2059, 2200, 2273
BstMAI	GTCTC	4 cut(s)	557, 810, 1334, 2112
BstMBI	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
BstMCI	CGRYCG	1 cut(s)	1239
BstNI	CCWGG	4 cut(s)	331, 512, 663, 2096
BstNSI	RCATGY	2 cut(s)	1003, 1201
BstSCI	CCNGG	5 cut(s)	329, 510, 661, 958, 2094
BstSFI	CTRYAG	5 cut(s)	190, 300, 741, 766, 1139
BstUI	CGCG	1 cut(s)	1241
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	3 cut(s)	2056, 2197, 2270
BstYI	RGATCY	3 cut(s)	2056, 2197, 2270
BstZ17I	GTATAC	1 cut(s)	649
BsuI	GTATCC	1 cut(s)	1894
BsuRI	GGCC	3 cut(s)	46, 127, 159
BtgI	CCRYGG	1 cut(s)	793
BtsCI	GGATG	3 cut(s)	115, 249, 1546
BtsIMutI	CAGTG	5 cut(s)	153, 1393, 1762, 1888, 2156
BtuMI	TCGCGA	1 cut(s)	1241
BveI	ACCTGC	1 cut(s)	417
Cac8I	GCNNGC	3 cut(s)	252, 520, 2236
CaiI	CAGNNNCTG	5 cut(s)	1684, 1819, 1897, 2101, 2158
CciI	TCATGA	1 cut(s)	760
CfoI	GCGC	1 cut(s)	510
Cfr13I	GGNCC	3 cut(s)	77, 406, 1600
CseI	GACGC	1 cut(s)	2129
Csp6I	GTAC	8 cut(s)	548, 970, 1062, 1260, 1525, 1533, 1617, 2206
CviQI	GTAC	8 cut(s)	548, 970, 1062, 1260, 1525, 1533, 1617, 2206
DdeI	CTNAG	4 cut(s)	842, 1446, 1536, 1572
DpnI	GATC	9 cut(s)	171, 450, 737, 990, 1080, 1320, 2058, 2199, 2272
DpnII	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
DraIII	CACNNNGTG	1 cut(s)	1517
EaeI	YGGCCR	1 cut(s)	44
Eco130I	CCWWGG	5 cut(s)	85, 102, 441, 671, 793
Eco147I	AGGCCT	1 cut(s)	127
Eco31I	GGTCTC	1 cut(s)	1334
Eco47I	GGWCC	3 cut(s)	77, 406, 1600
Eco57I	CTGAAG	3 cut(s)	512, 963, 1796
Eco88I	CYCGRG	1 cut(s)	1296
EcoNI	CCTNNNNNAGG	1 cut(s)	132
EcoRII	CCWGG	4 cut(s)	329, 510, 661, 2094
EcoT14I	CCWWGG	5 cut(s)	85, 102, 441, 671, 793
EcoT22I	ATGCAT	2 cut(s)	1213, 1570
ErhI	CCWWGG	5 cut(s)	85, 102, 441, 671, 793
Esp3I	CGTCTC	1 cut(s)	2112
FaqI	GGGAC	2 cut(s)	679, 1313
FauNDI	CATATG	1 cut(s)	2230
FbaI	TGATCA	1 cut(s)	169
FblI	GTMKAC	1 cut(s)	648
FokI	GGATG	3 cut(s)	122, 256, 1553
FspBI	CTAG	7 cut(s)	588, 747, 1515, 1604, 1643, 1694, 2060
GlaI	GCGC	1 cut(s)	509
GsuI	CTGGAG	9 cut(s)	1161, 1404, 1417, 1731, 1779, 1841, 1992, 2112, 2285
HaeIII	GGCC	3 cut(s)	46, 127, 159
HapII	CCGG	2 cut(s)	959, 2201
HgaI	GACGC	1 cut(s)	2129
HhaI	GCGC	1 cut(s)	510
Hin6I	GCGC	1 cut(s)	508
HinP1I	GCGC	1 cut(s)	508
HincII	GTYRAC	1 cut(s)	1005
HindII	GTYRAC	1 cut(s)	1005
HindIII	AAGCTT	1 cut(s)	2037
HpaII	CCGG	2 cut(s)	959, 2201
HphI	GGTGA	2 cut(s)	1503, 1960
Hpy166II	GTNNAC	5 cut(s)	423, 649, 692, 1005, 1399
Hpy8I	GTNNAC	5 cut(s)	423, 649, 692, 1005, 1399
Hpy99I	CGWCG	1 cut(s)	1031
HpyAV	CCTTC	7 cut(s)	90, 170, 194, 335, 910, 1093, 1632
HpyCH4IV	ACGT	3 cut(s)	388, 968, 1627
HpyF3I	CTNAG	4 cut(s)	842, 1446, 1536, 1572
HpySE526I	ACGT	3 cut(s)	388, 968, 1627
HspAI	GCGC	1 cut(s)	508
Kpn2I	TCCGGA	1 cut(s)	2200
Ksp22I	TGATCA	1 cut(s)	169
Kzo9I	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
LmnI	GCTCC	7 cut(s)	1026, 1282, 1423, 1581, 1825, 2098, 2128
LweI	GCATC	5 cut(s)	204, 245, 354, 1531, 1577
MaeI	CTAG	7 cut(s)	588, 747, 1515, 1604, 1643, 1694, 2060
MaeII	ACGT	3 cut(s)	388, 968, 1627
MaeIII	GTNAC	3 cut(s)	943, 1906, 2011
MalI	GATC	9 cut(s)	171, 450, 737, 990, 1080, 1320, 2058, 2199, 2272
MboI	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	3 cut(s)	2056, 2197, 2270
MhlI	GDGCHC	3 cut(s)	1279, 1947, 2151
MlsI	TGGCCA	1 cut(s)	46
MluNI	TGGCCA	1 cut(s)	46
MlyI	GAGTC	3 cut(s)	71, 661, 1168
MmeI	TCCRAC	2 cut(s)	1892, 2142
Mox20I	TGGCCA	1 cut(s)	46
Mph1103I	ATGCAT	2 cut(s)	1213, 1570
MroI	TCCGGA	1 cut(s)	2200
MscI	TGGCCA	1 cut(s)	46
MseI	TTAA	6 cut(s)	393, 500, 558, 593, 1425, 2111
MslI	CAYNNNNRTG	2 cut(s)	363, 1349
Msp20I	TGGCCA	1 cut(s)	46
MspA1I	CMGCKG	1 cut(s)	254
MspI	CCGG	2 cut(s)	959, 2201
MspR9I	CCNGG	5 cut(s)	331, 512, 663, 960, 2096
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	1 cut(s)	777
MvaI	CCWGG	4 cut(s)	331, 512, 663, 2096
MvnI	CGCG	1 cut(s)	1241
NciI	CCSGG	1 cut(s)	960
NcoI	CCATGG	1 cut(s)	793
NdeI	CATATG	1 cut(s)	2230
NdeII	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
NlaIV	GGNNCC	2 cut(s)	1707, 1920
NruI	TCGCGA	1 cut(s)	1241
NsiI	ATGCAT	2 cut(s)	1213, 1570
NspI	RCATGY	2 cut(s)	1003, 1201
PagI	TCATGA	1 cut(s)	760
PceI	AGGCCT	1 cut(s)	127
PciI	ACATGT	2 cut(s)	999, 1197
PctI	GAATGC	1 cut(s)	777
PflMI	CCANNNNNTGG	3 cut(s)	677, 1684, 1897
PleI	GAGTC	3 cut(s)	70, 661, 1168
PpsI	GAGTC	3 cut(s)	70, 661, 1168
Ppu21I	YACGTR	1 cut(s)	1628
PscI	ACATGT	2 cut(s)	999, 1197
PshBI	ATTAAT	1 cut(s)	393
Psp6I	CCWGG	4 cut(s)	329, 510, 661, 2094
PspGI	CCWGG	4 cut(s)	329, 510, 661, 2094
PspN4I	GGNNCC	2 cut(s)	1707, 1920
PspPI	GGNCC	3 cut(s)	77, 406, 1600
PstNI	CAGNNNCTG	5 cut(s)	1684, 1819, 1897, 2101, 2158
PsuI	RGATCY	3 cut(s)	2056, 2197, 2270
PvuII	CAGCTG	1 cut(s)	254
RruI	TCGCGA	1 cut(s)	1241
RsaI	GTAC	8 cut(s)	549, 971, 1063, 1261, 1526, 1534, 1618, 2207
RsaNI	GTAC	8 cut(s)	548, 970, 1062, 1260, 1525, 1533, 1617, 2206
RseI	CAYNNNNRTG	2 cut(s)	363, 1349
SaqAI	TTAA	6 cut(s)	393, 500, 558, 593, 1425, 2111
Sau3AI	GATC	9 cut(s)	169, 448, 735, 988, 1078, 1318, 2056, 2197, 2270
Sau96I	GGNCC	3 cut(s)	77, 406, 1600
ScaI	AGTACT	1 cut(s)	1534
SchI	GAGTC	3 cut(s)	71, 661, 1168
ScrFI	CCNGG	5 cut(s)	331, 512, 663, 960, 2096
SduI	GDGCHC	3 cut(s)	1279, 1947, 2151
SfaNI	GCATC	5 cut(s)	204, 245, 354, 1531, 1577
SfcI	CTRYAG	5 cut(s)	190, 300, 741, 766, 1139
SinI	GGWCC	3 cut(s)	77, 406, 1600
SmiMI	CAYNNNNRTG	2 cut(s)	363, 1349
SmlI	CTYRAG	3 cut(s)	787, 1133, 1490
SmoI	CTYRAG	3 cut(s)	787, 1133, 1490
SpeI	ACTAGT	1 cut(s)	587
SseBI	AGGCCT	1 cut(s)	127
SspI	AATATT	2 cut(s)	924, 1412
SspMI	CTAG	7 cut(s)	588, 747, 1515, 1604, 1643, 1694, 2060
StuI	AGGCCT	1 cut(s)	127
StyD4I	CCNGG	5 cut(s)	329, 510, 661, 958, 2094
StyI	CCWWGG	5 cut(s)	85, 102, 441, 671, 793
TaiI	ACGT	3 cut(s)	391, 971, 1630
TaqI	TCGA	5 cut(s)	198, 734, 753, 1172, 1980
TaqII	GACCGA	1 cut(s)	1225
TatI	WGTACW	5 cut(s)	1061, 1259, 1524, 1532, 2205
Tru1I	TTAA	6 cut(s)	393, 500, 558, 593, 1425, 2111
Tru9I	TTAA	6 cut(s)	393, 500, 558, 593, 1425, 2111
TscAI	CASTG	5 cut(s)	160, 1393, 1762, 1888, 2163
TspGWI	ACGGA	1 cut(s)	828
TspRI	CASTG	5 cut(s)	160, 1393, 1762, 1888, 2163
Van91I	CCANNNNNTGG	3 cut(s)	677, 1684, 1897
VpaK11BI	GGWCC	3 cut(s)	77, 406, 1600
VspI	ATTAAT	1 cut(s)	393
XagI	CCTNNNNNAGG	1 cut(s)	132
XapI	RAATTY	3 cut(s)	496, 715, 1354
XbaI	TCTAGA	1 cut(s)	2059
XceI	RCATGY	2 cut(s)	1003, 1201
XmiI	GTMKAC	1 cut(s)	648
XspI	CTAG	7 cut(s)	588, 747, 1515, 1604, 1643, 1694, 2060
ZrmI	AGTACT	1 cut(s)	1534
Zsp2I	ATGCAT	2 cut(s)	1213, 1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.