Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0017654

Physical Location & Seq

Genomic Coordinates Forward (+)

2601907 .. 2605099

Gene Structure 3193 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1036100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGTCATTGATTCAAGCTTCTGGATCTCGTACTTTCTTTGTCGCACTCAGTCTTGTTGTAATTGTTTTGGTGTCCATGGAAGACATGAGCCCTAAAGAAAGTAATGGTCTCCCTAGCTTTGCCCATGGCCTCCAAATCTTGGTGGTAGATCATGATACATTGTCCCTCATGTGCATAGCGTCGACGTTAGAAAAATACTCCTTCAAAGTTACCACAACTGCACTGGCTTCTGTTGCTTTGTCGATGATTAAGGAACAAAAGTATCATTACGATCTAGTAATGGCTAACATCAGCATGCCAGATAAAGACAAATTTTCGCTTTTACAGGTGCTTCATAAGAACGAGATTCCTGTCATATTCATGTCCTCCGAAGTGAACATTGATGTCGCCAAGAAGGCCCTGGCTGAAGGAGCATGCTTTTTTCTTCAGAAACCAGTTTCTTCAGAGGATCTGAAAAATGTGTGGCAACACGCTTATCGGAAGGTAAGGAACCCAAGGAAGGACACGCATAAAACAAAATGTGGCAAGAAGATTCACGAGGCCGGTGGTGTGCTTATACCTCCCACTGGAGGTATTAGAATCCATGAGGTTGGCGGTGTGTCTAGGCTTCCCACCGGACGCGAATTGTGTCTTGACACACAAGACACTCGCGATGAACGGCAGATAGCCGCAGAGAATTATACACAAGGAGCATTGGGGATAAACAGACCAGTCGATGATAAAGAAGACCAAGAAAAAGCGAAGAAGGTTAAACTAAACACAGAGCAAGATTGCGATGAGGAAGGAATGGAAAATCAAGATTGCGATGGCAGCTCCAAACGGAAGAAGTGGCACCCCGTTTGGACAACGGAACTTCATCTCAAGTTTACAGCAGCCATAAGTGCATTAGGAGATCAAAAAGCTCGTCCTAGAAGGATTCTGAAATGGATGAATGTGCCTGATATAACGGTGCGCCAGGTTGCAAGCCATCTGCAGAAATATAGAAAAAACGTACACCGGATTCAGGAGGTTGGCACGACGAGCTTACCTTCATTAGGCAAATCATCCATTTGGAATAACAGAAATGAATTTCCACCAGCAAGGCAGACTTCTCTGGTATGCCACCTGTACGAACAAAGGACTTCAAGTTCTGGAGCTCAAGGCAATCCAACGCAATTAATGACTCCGAATTCTTTCACTGGATTCAATGACTACAGAAGGCAGAATCTGTATACAGAACACAGAGTCATGTCTCACAACACAAATCATCAAAGCGAAAGCCTCTATGACTTTTATCTGAGAACTCAAGGAAAGTTTGAGAATTTGGATCAGATACTAGAAACAAACAGTTTCACATTAGGAGCTGACATGAATAAAATCGAGAGAAACCAACCACTTGGATTGGAAGAGATCATGTTTAAAGCAAGCGAAAGAACCTTACCGAGTACCAACTACATGACACCAGAGTTTGGTTCTCCCTACATATCAGCAAATACTTTTCAGGTCCCGAATGCGTCTGTCAGCATAAATCAAGCGCAGAATTATTGTCCAGCACCGACTGCTCCGTTCAATGCCCAAAATCAGGACCATTTTTCAGCAGAAGCCACGAGAACAACTGAAGTAGGCATGAATCAAGCACAGTTTTATGCTCCAGCGCTGAATACTCCTATCAATTCCCAAAATGAGAACTACTTTTCAGCGGACGTCATGGGAACAACTGAAGCAGGCATGAATCAACCACAGTATTATACTCCAGCCCCGACTGCCCCAATCTACTTCCAAAATCAGAACCACTTTTCAGCAGAAGTCACCGGAACAACTGACGTACTTGAGGTTGTGCCGGAACAGATACCTTCAGTCAATGAAACCAATGCAGAAACATTTCCAGCAAACTTTACCGGTGGAAGCCAAGAGCTGGATGCTGCAGCAAGAGAAGCTCATCCAGCTAGTTCAAACAATAACCAACCCATGTCGGAGTACGATGATCTGTTGAAGCTGCTTGAAGAAGATCCAGAGAAGTTCAACTGGTTTGAGCCGTTTGACAGTGCACCAAATGCAGGTGATGCCAATCGTTACCGTGCATGGCTGACGGAAACTTTACTTGAAAAGAGCCCGGATTCACCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

702

Amino Acids

78.59

Weight (kDa)

5.63

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	46 - 153	4.1e-16	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g26570
malus_domestica	MD13G1034600.v1.1 MD16G1036100.v1.1
prunus_persica	Prupe.1G317900_v2.0.a1
rosa_laevigata	RLG00000006691
rosa_multiflora	Rmu_sc0000459.1_g000011
rosa_roxburghii	Rroxscaffold_5G00375600
rosa_samantha	Rh4AG330200 Rh4BG337800 Rh4CG353200 Rh4DG333800
rosa_wichuraiana	Rw4G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2027
AatII	GACGTC	1 cut(s)	1686
Acc36I	ACCTGC	1 cut(s)	2027
AccB1I	GGYRCC	1 cut(s)	831
AccB7I	CCANNNNNTGG	3 cut(s)	139, 1448, 1894
AccI	GTMKAC	2 cut(s)	182, 1211
AccII	CGCG	2 cut(s)	621, 651
AciI	CCGC	3 cut(s)	594, 669, 1679
AclWI	GGATC	4 cut(s)	31, 456, 1314, 1982
AcsI	RAATTY	4 cut(s)	311, 1067, 1168, 1300
AcuI	CTGAAG	6 cut(s)	410, 426, 426, 1617, 1719, 1818
AcyI	GRCGYC	1 cut(s)	1683
AfaI	GTAC	6 cut(s)	31, 993, 1109, 1426, 1806, 1958
AfeI	AGCGCT	1 cut(s)	1635
AgeI	ACCGGT	1 cut(s)	1877
AjnI	CCWGG	2 cut(s)	399, 954
AloI	GAACNNNNNNTCC	2 cut(s)	1111, 1143
Alw21I	GWGCWC	2 cut(s)	1138, 2029
Alw26I	GTCTC	2 cut(s)	113, 1236
Alw44I	GTGCAC	1 cut(s)	2025
AlwI	GGATC	4 cut(s)	31, 456, 1314, 1982
AlwNI	CAGNNNCTG	1 cut(s)	1207
Aor51HI	AGCGCT	1 cut(s)	1635
AoxI	GGCC	3 cut(s)	127, 396, 540
ApaLI	GTGCAC	1 cut(s)	2025
ApeKI	GCWGC	5 cut(s)	810, 872, 1901, 1904, 1975
ApoI	RAATTY	4 cut(s)	311, 1067, 1168, 1300
ArsI	GACNNNNNNTTYG	2 cut(s)	889, 921
AseI	ATTAAT	1 cut(s)	1157
AsiGI	ACCGGT	1 cut(s)	1877
Asp700I	GAANNNNTTC	2 cut(s)	1172, 1860
AspLEI	GCGC	3 cut(s)	954, 1516, 1636
AspS9I	GGNCC	3 cut(s)	397, 1483, 1564
AsuC2I	CCSGG	1 cut(s)	2093
AsuHPI	GGTGA	3 cut(s)	1780, 2051, 2091
AvaII	GGWCC	2 cut(s)	1483, 1564
BaeGI	GKGCMC	1 cut(s)	2029
BaeI	ACNNNNGTAYC	2 cut(s)	245, 278
BanI	GGYRCC	1 cut(s)	831
BanII	GRGCYC	3 cut(s)	92, 1138, 2093
BauI	CACGAG	2 cut(s)	536, 1585
BbsI	GAAGAC	2 cut(s)	87, 732
Bbv12I	GWGCWC	2 cut(s)	1138, 2029
BbvI	GCAGC	5 cut(s)	822, 884, 1888, 1916, 1962
BccI	CCATC	2 cut(s)	800, 975
BceAI	ACGGC	2 cut(s)	674, 1999
BciT130I	CCWGG	2 cut(s)	401, 956
BcnI	CCSGG	1 cut(s)	2093
BcoDI	GTCTC	2 cut(s)	113, 1236
BfaI	CTAG	6 cut(s)	114, 275, 603, 909, 1316, 1926
BfmI	CTRYAG	3 cut(s)	971, 1192, 1902
BfoI	RGCGCY	1 cut(s)	1637
BfuAI	ACCTGC	1 cut(s)	2027
BglI	GCCNNNNNGGC	1 cut(s)	395
BisI	GCNGC	6 cut(s)	669, 811, 873, 1902, 1905, 1976
BlsI	GCNGC	6 cut(s)	670, 812, 874, 1903, 1906, 1977
Bme1390I	CCNGG	3 cut(s)	401, 956, 2093
Bme18I	GGWCC	2 cut(s)	1483, 1564
BmgT120I	GGNCC	3 cut(s)	397, 1483, 1564
BmiI	GGNNCC	3 cut(s)	491, 833, 1485
BmrFI	CCNGG	3 cut(s)	401, 956, 2093
BmsI	GCATC	2 cut(s)	1888, 2032
BpiI	GAAGAC	2 cut(s)	87, 732
BpmI	CTGGAG	4 cut(s)	588, 1152, 1614, 1716
BpuEI	CTTGAG	4 cut(s)	845, 1122, 1269, 1829
BpuMI	CCSGG	1 cut(s)	2093
BsaBI	GATNNNNATC	1 cut(s)	2046
BsaHI	GRCGYC	1 cut(s)	1683
BsaI	GGTCTC	1 cut(s)	113
BsaJI	CCNNGG	4 cut(s)	75, 124, 399, 494
BsaWI	WCCGGW	4 cut(s)	614, 996, 1790, 1877
Bse118I	RCCGGY	2 cut(s)	542, 1877
Bse1I	ACTGG	6 cut(s)	228, 434, 571, 710, 1183, 2009
Bse8I	GATNNNNATC	1 cut(s)	2046
BseBI	CCWGG	2 cut(s)	401, 956
BseDI	CCNNGG	4 cut(s)	75, 124, 399, 494
BseGI	GGATG	4 cut(s)	933, 1043, 1903, 1918
BseJI	GATNNNNATC	1 cut(s)	2046
BseMII	CTCAG	2 cut(s)	61, 1268
BseNI	ACTGG	6 cut(s)	228, 434, 571, 710, 1183, 2009
BseSI	GKGCMC	1 cut(s)	2029
BseXI	GCAGC	5 cut(s)	822, 884, 1888, 1916, 1962
BsgI	GTGCAG	1 cut(s)	204
Bsh1236I	CGCG	2 cut(s)	621, 651
BshFI	GGCC	3 cut(s)	129, 398, 542
BshNI	GGYRCC	1 cut(s)	831
BshTI	ACCGGT	1 cut(s)	1877
BsiHKAI	GWGCWC	2 cut(s)	1138, 2029
BsiSI	CCGG	7 cut(s)	543, 615, 997, 1791, 1820, 1878, 2093
BslFI	GGGAC	2 cut(s)	148, 1469
BsmAI	GTCTC	2 cut(s)	113, 1236
BsmFI	GGGAC	2 cut(s)	148, 1469
BsmI	GAATGC	1 cut(s)	1495
BsnI	GGCC	3 cut(s)	129, 398, 542
Bso31I	GGTCTC	1 cut(s)	113
Bsp1286I	GDGCHC	4 cut(s)	92, 1138, 2029, 2093
Bsp143I	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
Bsp19I	CCATGG	2 cut(s)	75, 124
Bsp68I	TCGCGA	1 cut(s)	651
BspACI	CCGC	3 cut(s)	594, 669, 1679
BspANI	GGCC	3 cut(s)	129, 398, 542
BspCNI	CTCAG	2 cut(s)	60, 1269
BspFNI	CGCG	2 cut(s)	621, 651
BspHI	TCATGA	1 cut(s)	151
BspLI	GGNNCC	3 cut(s)	491, 833, 1485
BspMAI	CTGCAG	2 cut(s)	975, 1906
BspMI	ACCTGC	1 cut(s)	2027
BspPI	GGATC	4 cut(s)	31, 456, 1314, 1982
BspT107I	GGYRCC	1 cut(s)	831
BspTNI	GGTCTC	1 cut(s)	113
BsrFI	RCCGGY	2 cut(s)	542, 1877
BsrI	ACTGG	6 cut(s)	228, 434, 571, 710, 1183, 2009
BssAI	RCCGGY	2 cut(s)	542, 1877
BssECI	CCNNGG	4 cut(s)	75, 124, 399, 494
BssMI	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
BssNAI	GTATAC	1 cut(s)	1212
BssNI	GRCGYC	1 cut(s)	1683
BssSI	CACGAG	2 cut(s)	536, 1585
BssT1I	CCWWGG	3 cut(s)	75, 124, 494
Bst1107I	GTATAC	1 cut(s)	1212
Bst2BI	CACGAG	2 cut(s)	536, 1585
Bst2UI	CCWGG	2 cut(s)	401, 956
Bst4CI	ACNGT	6 cut(s)	949, 1328, 1620, 1722, 2024, 2057
Bst6I	CTCTTC	1 cut(s)	1380
BstACI	GRCGYC	1 cut(s)	1683
BstAPI	GCANNNNNTGC	3 cut(s)	1538, 2033, 2042
BstC8I	GCNNGC	5 cut(s)	296, 415, 964, 1405, 1705
BstDEI	CTNAG	2 cut(s)	47, 1277
BstDSI	CCRYGG	2 cut(s)	75, 124
BstENI	CCTNNNNNAGG	1 cut(s)	1032
BstF5I	GGATG	4 cut(s)	933, 1043, 1903, 1918
BstFNI	CGCG	2 cut(s)	621, 651
BstH2I	RGCGCY	1 cut(s)	1637
BstHHI	GCGC	3 cut(s)	954, 1516, 1636
BstKTI	GATC	9 cut(s)	26, 151, 274, 451, 895, 1309, 1392, 1966, 1990
BstMAI	GTCTC	2 cut(s)	113, 1236
BstMBI	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
BstNI	CCWGG	2 cut(s)	401, 956
BstNSI	RCATGY	2 cut(s)	298, 417
BstSCI	CCNGG	3 cut(s)	399, 954, 2091
BstSFI	CTRYAG	3 cut(s)	971, 1192, 1902
BstSLI	GKGCMC	1 cut(s)	2029
BstUI	CGCG	2 cut(s)	621, 651
BstV1I	GCAGC	5 cut(s)	822, 884, 1888, 1916, 1962
BstV2I	GAAGAC	2 cut(s)	87, 732
BstX2I	RGATCY	3 cut(s)	23, 448, 1987
BstXI	CCANNNNNNTGG	2 cut(s)	590, 1376
BstYI	RGATCY	3 cut(s)	23, 448, 1987
BstZ17I	GTATAC	1 cut(s)	1212
BsuRI	GGCC	3 cut(s)	129, 398, 542
BtgI	CCRYGG	2 cut(s)	75, 124
BtgZI	GCGATG	3 cut(s)	666, 789, 819
BtsCI	GGATG	4 cut(s)	933, 1043, 1903, 1918
BtsIMutI	CAGTG	4 cut(s)	221, 564, 1176, 2029
BtuMI	TCGCGA	1 cut(s)	651
BveI	ACCTGC	1 cut(s)	2027
Cac8I	GCNNGC	5 cut(s)	296, 415, 964, 1405, 1705
CaiI	CAGNNNCTG	1 cut(s)	1207
CciI	TCATGA	1 cut(s)	151
CfoI	GCGC	3 cut(s)	954, 1516, 1636
Cfr10I	RCCGGY	2 cut(s)	542, 1877
Cfr13I	GGNCC	3 cut(s)	397, 1483, 1564
CseI	GACGC	3 cut(s)	168, 627, 1482
Csp6I	GTAC	6 cut(s)	30, 992, 1108, 1425, 1805, 1957
CspAI	ACCGGT	1 cut(s)	1877
CspCI	CAANNNNNGTGG	2 cut(s)	1362, 1397
CviQI	GTAC	6 cut(s)	30, 992, 1108, 1425, 1805, 1957
DdeI	CTNAG	2 cut(s)	47, 1277
DpnI	GATC	9 cut(s)	25, 150, 273, 450, 894, 1308, 1391, 1965, 1989
DpnII	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
DraI	TTTAAA	1 cut(s)	1399
Eam1104I	CTCTTC	1 cut(s)	1380
EarI	CTCTTC	1 cut(s)	1380
Ecl136II	GAGCTC	1 cut(s)	1136
Eco130I	CCWWGG	3 cut(s)	75, 124, 494
Eco24I	GRGCYC	3 cut(s)	92, 1138, 2093
Eco31I	GGTCTC	1 cut(s)	113
Eco47I	GGWCC	2 cut(s)	1483, 1564
Eco47III	AGCGCT	1 cut(s)	1635
Eco53kI	GAGCTC	1 cut(s)	1136
Eco57I	CTGAAG	6 cut(s)	410, 426, 426, 1617, 1719, 1818
EcoICRI	GAGCTC	1 cut(s)	1136
EcoNI	CCTNNNNNAGG	1 cut(s)	1032
EcoO109I	RGGNCCY	2 cut(s)	397, 1483
EcoRI	GAATTC	1 cut(s)	1168
EcoRII	CCWGG	2 cut(s)	399, 954
EcoT14I	CCWWGG	3 cut(s)	75, 124, 494
EcoT38I	GRGCYC	3 cut(s)	92, 1138, 2093
ErhI	CCWWGG	3 cut(s)	75, 124, 494
FalI	AAGNNNNNCTT	2 cut(s)	1072, 1104
FaqI	GGGAC	2 cut(s)	148, 1469
FblI	GTMKAC	2 cut(s)	182, 1211
Fnu4HI	GCNGC	6 cut(s)	669, 811, 873, 1902, 1905, 1976
FokI	GGATG	4 cut(s)	940, 1030, 1905, 1910
FriOI	GRGCYC	3 cut(s)	92, 1138, 2093
Fsp4HI	GCNGC	6 cut(s)	669, 811, 873, 1902, 1905, 1976
FspBI	CTAG	6 cut(s)	114, 275, 603, 909, 1316, 1926
GlaI	GCGC	3 cut(s)	953, 1515, 1635
GluI	GCNGC	6 cut(s)	669, 811, 873, 1902, 1905, 1976
GsuI	CTGGAG	4 cut(s)	588, 1152, 1614, 1716
HaeII	RGCGCY	1 cut(s)	1637
HaeIII	GGCC	3 cut(s)	129, 398, 542
HapII	CCGG	7 cut(s)	543, 615, 997, 1791, 1820, 1878, 2093
HgaI	GACGC	3 cut(s)	168, 627, 1482
HhaI	GCGC	3 cut(s)	954, 1516, 1636
Hin1I	GRCGYC	1 cut(s)	1683
Hin6I	GCGC	3 cut(s)	952, 1514, 1634
HinP1I	GCGC	3 cut(s)	952, 1514, 1634
HincII	GTYRAC	1 cut(s)	183
HindII	GTYRAC	1 cut(s)	183
HindIII	AAGCTT	1 cut(s)	15
HpaII	CCGG	7 cut(s)	543, 615, 997, 1791, 1820, 1878, 2093
HphI	GGTGA	3 cut(s)	1780, 2051, 2091
Hpy166II	GTNNAC	6 cut(s)	183, 376, 867, 994, 1212, 2027
Hpy8I	GTNNAC	6 cut(s)	183, 376, 867, 994, 1212, 2027
Hpy99I	CGWCG	3 cut(s)	184, 187, 1021
HpyCH4III	ACNGT	6 cut(s)	949, 1328, 1620, 1722, 2024, 2057
HpyCH4IV	ACGT	4 cut(s)	185, 990, 1683, 1803
HpyF3I	CTNAG	2 cut(s)	47, 1277
HpySE526I	ACGT	4 cut(s)	185, 990, 1683, 1803
Hsp92I	GRCGYC	1 cut(s)	1683
HspAI	GCGC	3 cut(s)	952, 1514, 1634
Kzo9I	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
LmnI	GCTCC	7 cut(s)	410, 689, 818, 1133, 1340, 1546, 1633
Lsp1109I	GCAGC	5 cut(s)	822, 884, 1888, 1916, 1962
LweI	GCATC	2 cut(s)	1888, 2032
MaeI	CTAG	6 cut(s)	114, 275, 603, 909, 1316, 1926
MaeII	ACGT	4 cut(s)	185, 990, 1683, 1803
MaeIII	GTNAC	3 cut(s)	208, 1786, 2051
MalI	GATC	9 cut(s)	25, 150, 273, 450, 894, 1308, 1391, 1965, 1989
MboI	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
MflI	RGATCY	3 cut(s)	23, 448, 1987
MhlI	GDGCHC	4 cut(s)	92, 1138, 2029, 2093
MlyI	GAGTC	2 cut(s)	1156, 1233
MmeI	TCCRAC	2 cut(s)	1172, 1932
MroXI	GAANNNNTTC	2 cut(s)	1172, 1860
MseI	TTAA	4 cut(s)	249, 750, 1157, 1398
MslI	CAYNNNNRTG	2 cut(s)	293, 359
MspA1I	CMGCKG	1 cut(s)	1679
MspI	CCGG	7 cut(s)	543, 615, 997, 1791, 1820, 1878, 2093
MspR9I	CCNGG	3 cut(s)	401, 956, 2093
Mva1269I	GAATGC	1 cut(s)	1495
MvaI	CCWGG	2 cut(s)	401, 956
MvnI	CGCG	2 cut(s)	621, 651
NciI	CCSGG	1 cut(s)	2093
NcoI	CCATGG	2 cut(s)	75, 124
NdeII	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
NlaIV	GGNNCC	3 cut(s)	491, 833, 1485
NmuCI	GTSAC	1 cut(s)	1786
NruI	TCGCGA	1 cut(s)	651
NspI	RCATGY	2 cut(s)	298, 417
PaeI	GCATGC	2 cut(s)	298, 417
PagI	TCATGA	1 cut(s)	151
PaqCI	CACCTGC	1 cut(s)	2027
PctI	GAATGC	1 cut(s)	1495
PdmI	GAANNNNTTC	2 cut(s)	1172, 1860
PflMI	CCANNNNNTGG	3 cut(s)	139, 1448, 1894
PinAI	ACCGGT	1 cut(s)	1877
PkrI	GCNGC	6 cut(s)	670, 812, 874, 1903, 1906, 1977
PleI	GAGTC	2 cut(s)	1156, 1232
PpsI	GAGTC	2 cut(s)	1156, 1232
PpuMI	RGGWCCY	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	1157
Psp124BI	GAGCTC	1 cut(s)	1138
Psp5II	RGGWCCY	1 cut(s)	1483
Psp6I	CCWGG	2 cut(s)	399, 954
PspGI	CCWGG	2 cut(s)	399, 954
PspN4I	GGNNCC	3 cut(s)	491, 833, 1485
PspPI	GGNCC	3 cut(s)	397, 1483, 1564
PspPPI	RGGWCCY	1 cut(s)	1483
PstI	CTGCAG	2 cut(s)	975, 1906
PstNI	CAGNNNCTG	1 cut(s)	1207
PsuI	RGATCY	3 cut(s)	23, 448, 1987
RruI	TCGCGA	1 cut(s)	651
RsaI	GTAC	6 cut(s)	31, 993, 1109, 1426, 1806, 1958
RsaNI	GTAC	6 cut(s)	30, 992, 1108, 1425, 1805, 1957
RseI	CAYNNNNRTG	2 cut(s)	293, 359
SacI	GAGCTC	1 cut(s)	1138
SalI	GTCGAC	1 cut(s)	181
SaqAI	TTAA	4 cut(s)	249, 750, 1157, 1398
SatI	GCNGC	6 cut(s)	669, 811, 873, 1902, 1905, 1976
Sau3AI	GATC	9 cut(s)	23, 148, 271, 448, 892, 1306, 1389, 1963, 1987
Sau96I	GGNCC	3 cut(s)	397, 1483, 1564
SchI	GAGTC	2 cut(s)	1156, 1233
ScrFI	CCNGG	3 cut(s)	401, 956, 2093
SduI	GDGCHC	4 cut(s)	92, 1138, 2029, 2093
SfaNI	GCATC	2 cut(s)	1888, 2032
SfcI	CTRYAG	3 cut(s)	971, 1192, 1902
SgrDI	CGTCGACG	1 cut(s)	181
SinI	GGWCC	2 cut(s)	1483, 1564
SmiMI	CAYNNNNRTG	2 cut(s)	293, 359
SmlI	CTYRAG	4 cut(s)	860, 1137, 1284, 1808
SmoI	CTYRAG	4 cut(s)	860, 1137, 1284, 1808
SphI	GCATGC	2 cut(s)	298, 417
SsiI	CCGC	3 cut(s)	594, 669, 1679
SspMI	CTAG	6 cut(s)	114, 275, 603, 909, 1316, 1926
SstI	GAGCTC	1 cut(s)	1138
StyD4I	CCNGG	3 cut(s)	399, 954, 2091
StyI	CCWWGG	3 cut(s)	75, 124, 494
TaaI	ACNGT	6 cut(s)	949, 1328, 1620, 1722, 2024, 2057
TaiI	ACGT	4 cut(s)	188, 993, 1686, 1806
TaqI	TCGA	4 cut(s)	182, 242, 714, 1359
TauI	GCSGC	1 cut(s)	671
Tru1I	TTAA	4 cut(s)	249, 750, 1157, 1398
Tru9I	TTAA	4 cut(s)	249, 750, 1157, 1398
TscAI	CASTG	4 cut(s)	228, 571, 1183, 2029
TseFI	GTSAC	1 cut(s)	1786
TseI	GCWGC	5 cut(s)	810, 872, 1901, 1904, 1975
Tsp45I	GTSAC	1 cut(s)	1786
TspGWI	ACGGA	4 cut(s)	835, 863, 1533, 2084
TspRI	CASTG	4 cut(s)	228, 571, 1183, 2029
Van91I	CCANNNNNTGG	3 cut(s)	139, 1448, 1894
VneI	GTGCAC	1 cut(s)	2025
VpaK11BI	GGWCC	2 cut(s)	1483, 1564
VspI	ATTAAT	1 cut(s)	1157
XagI	CCTNNNNNAGG	1 cut(s)	1032
XapI	RAATTY	4 cut(s)	311, 1067, 1168, 1300
XceI	RCATGY	2 cut(s)	298, 417
XcmI	CCANNNNNNNNNTGG	2 cut(s)	220, 397
XmiI	GTMKAC	2 cut(s)	182, 1211
XmnI	GAANNNNTTC	2 cut(s)	1172, 1860
XspI	CTAG	6 cut(s)	114, 275, 603, 909, 1316, 1926
ZraI	GACGTC	1 cut(s)	1684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.