Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_samantha | Rh3DG297200 Rh7AG046500 Rh7BG045400 Rh7BG045500 Rh7BG045900 Rh7CG046600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 64 |
| AfaI | GTAC | 6 cut(s) | 88, 147, 187, 229, 289, 365 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 102 |
| AgsI | TTSAA | 2 cut(s) | 140, 299 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| AoxI | GGCC | 1 cut(s) | 64 |
| ApeKI | GCWGC | 1 cut(s) | 50 |
| BalI | TGGCCA | 1 cut(s) | 66 |
| BbvI | GCAGC | 1 cut(s) | 37 |
| BclI | TGATCA | 1 cut(s) | 160 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BisI | GCNGC | 1 cut(s) | 51 |
| BlsI | GCNGC | 1 cut(s) | 52 |
| BmcAI | AGTACT | 2 cut(s) | 88, 289 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmsI | GCATC | 1 cut(s) | 298 |
| BpmI | CTGGAG | 1 cut(s) | 254 |
| BsaJI | CCNNGG | 1 cut(s) | 67 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 102 |
| Bse1I | ACTGG | 2 cut(s) | 183, 295 |
| BseDI | CCNNGG | 1 cut(s) | 67 |
| BseGI | GGATG | 1 cut(s) | 313 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BseNI | ACTGG | 2 cut(s) | 183, 295 |
| BseXI | GCAGC | 1 cut(s) | 37 |
| BshFI | GGCC | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BsnI | GGCC | 1 cut(s) | 66 |
| Bsp143I | GATC | 2 cut(s) | 160, 247 |
| BspANI | GGCC | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BsrI | ACTGG | 2 cut(s) | 183, 295 |
| BssECI | CCNNGG | 1 cut(s) | 67 |
| BssMI | GATC | 2 cut(s) | 160, 247 |
| BssT1I | CCWWGG | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 4 cut(s) | 33, 59, 287, 337 |
| BstF5I | GGATG | 1 cut(s) | 313 |
| BstKTI | GATC | 2 cut(s) | 163, 250 |
| BstMBI | GATC | 2 cut(s) | 160, 247 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 37 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 74 |
| BsuRI | GGCC | 1 cut(s) | 66 |
| BtsCI | GGATG | 1 cut(s) | 313 |
| BtsIMutI | CAGTG | 1 cut(s) | 64 |
| Csp6I | GTAC | 6 cut(s) | 87, 146, 186, 228, 288, 364 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 82, 117 |
| CviJI | RGCY | 3 cut(s) | 50, 66, 173 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 66, 173 |
| CviQI | GTAC | 6 cut(s) | 87, 146, 186, 228, 288, 364 |
| DpnI | GATC | 2 cut(s) | 162, 249 |
| DpnII | GATC | 2 cut(s) | 160, 247 |
| EaeI | YGGCCR | 1 cut(s) | 64 |
| Eco130I | CCWWGG | 1 cut(s) | 67 |
| EcoT14I | CCWWGG | 1 cut(s) | 67 |
| ErhI | CCWWGG | 1 cut(s) | 67 |
| FaiI | YATR | 2 cut(s) | 243, 282 |
| FbaI | TGATCA | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 1 cut(s) | 51 |
| FokI | GGATG | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 1 cut(s) | 51 |
| GluI | GCNGC | 1 cut(s) | 51 |
| GsuI | CTGGAG | 1 cut(s) | 254 |
| HaeIII | GGCC | 1 cut(s) | 66 |
| HinfI | GANTC | 1 cut(s) | 221 |
| HpyAV | CCTTC | 1 cut(s) | 134 |
| HpyCH4III | ACNGT | 4 cut(s) | 33, 59, 287, 337 |
| HpyCH4IV | ACGT | 2 cut(s) | 99, 362 |
| HpyCH4V | TGCA | 2 cut(s) | 53, 332 |
| HpySE526I | ACGT | 2 cut(s) | 99, 362 |
| Ksp22I | TGATCA | 1 cut(s) | 160 |
| Kzo9I | GATC | 2 cut(s) | 160, 247 |
| LmnI | GCTCC | 1 cut(s) | 178 |
| LpnPI | CCDG | 8 cut(s) | 38, 92, 182, 196, 210, 276, 284, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 37 |
| LweI | GCATC | 1 cut(s) | 298 |
| MaeII | ACGT | 2 cut(s) | 99, 362 |
| MalI | GATC | 2 cut(s) | 162, 249 |
| MboI | GATC | 2 cut(s) | 160, 247 |
| MlsI | TGGCCA | 1 cut(s) | 66 |
| MluCI | AATT | 1 cut(s) | 154 |
| MluNI | TGGCCA | 1 cut(s) | 66 |
| MlyI | GAGTC | 1 cut(s) | 230 |
| MnlI | CCTC | 3 cut(s) | 103, 163, 250 |
| Mox20I | TGGCCA | 1 cut(s) | 66 |
| MscI | TGGCCA | 1 cut(s) | 66 |
| MseI | TTAA | 1 cut(s) | 35 |
| Msp20I | TGGCCA | 1 cut(s) | 66 |
| NdeII | GATC | 2 cut(s) | 160, 247 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| PkrI | GCNGC | 1 cut(s) | 52 |
| PleI | GAGTC | 1 cut(s) | 229 |
| PpsI | GAGTC | 1 cut(s) | 229 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| RsaI | GTAC | 6 cut(s) | 88, 147, 187, 229, 289, 365 |
| RsaNI | GTAC | 6 cut(s) | 87, 146, 186, 228, 288, 364 |
| SaqAI | TTAA | 1 cut(s) | 35 |
| SatI | GCNGC | 1 cut(s) | 51 |
| Sau3AI | GATC | 2 cut(s) | 160, 247 |
| ScaI | AGTACT | 2 cut(s) | 88, 289 |
| SchI | GAGTC | 1 cut(s) | 230 |
| SetI | ASST | 7 cut(s) | 52, 73, 102, 114, 151, 365, 369 |
| SfaNI | GCATC | 1 cut(s) | 298 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| Sse9I | AATT | 1 cut(s) | 154 |
| SspI | AATATT | 1 cut(s) | 45 |
| StyI | CCWWGG | 1 cut(s) | 67 |
| TaaI | ACNGT | 4 cut(s) | 33, 59, 287, 337 |
| TaiI | ACGT | 2 cut(s) | 102, 365 |
| TasI | AATT | 1 cut(s) | 154 |
| TatI | WGTACW | 3 cut(s) | 86, 185, 287 |
| Tru1I | TTAA | 1 cut(s) | 35 |
| Tru9I | TTAA | 1 cut(s) | 35 |
| TscAI | CASTG | 1 cut(s) | 64 |
| TseI | GCWGC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 5 cut(s) | 17, 108, 222, 252, 359 |
| TspRI | CASTG | 1 cut(s) | 64 |
| ZrmI | AGTACT | 2 cut(s) | 88, 289 |