transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g31060 |
| malus_domestica | MD08G1070900.v1.1 |
| prunus_persica | Prupe.1G405100_v2.0.a1 |
| pyrus_communis | pycom08g05870 |
| rosa_chinensis | RchiOBHm_Chr6g0311741 |
| rosa_laevigata | RLG00000010378 |
| rosa_multiflora | Rmu_sc0002888.1_g000037 |
| rosa_roxburghii | Rroxscaffold_7G00157350 |
| rosa_samantha | Rh6AG506700 Rh6BG517300 Rh6DG508900 |
| rosa_wichuraiana | Rw6G044070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 160 |
| AclWI | GGATC | 1 cut(s) | 630 |
| AcsI | RAATTY | 1 cut(s) | 653 |
| AfaI | GTAC | 1 cut(s) | 83 |
| AgsI | TTSAA | 5 cut(s) | 62, 175, 533, 691, 769 |
| AjnI | CCWGG | 1 cut(s) | 289 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 813 |
| AluBI | AGCT | 7 cut(s) | 12, 47, 278, 410, 468, 487, 761 |
| AluI | AGCT | 7 cut(s) | 12, 47, 278, 410, 468, 487, 761 |
| AlwI | GGATC | 1 cut(s) | 630 |
| AoxI | GGCC | 2 cut(s) | 185, 292 |
| ApeKI | GCWGC | 3 cut(s) | 468, 797, 824 |
| ApoI | RAATTY | 1 cut(s) | 653 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 396, 428 |
| AseI | ATTAAT | 1 cut(s) | 737 |
| AspS9I | GGNCC | 1 cut(s) | 833 |
| AvaII | GGWCC | 1 cut(s) | 833 |
| AxyI | CCTNAGG | 1 cut(s) | 182 |
| BbsI | GAAGAC | 3 cut(s) | 69, 231, 806 |
| BbvI | GCAGC | 3 cut(s) | 455, 809, 836 |
| BccI | CCATC | 5 cut(s) | 23, 102, 258, 424, 563 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BciT130I | CCWGG | 1 cut(s) | 291 |
| BfaI | CTAG | 2 cut(s) | 372, 588 |
| BisI | GCNGC | 3 cut(s) | 469, 798, 825 |
| BlsI | GCNGC | 3 cut(s) | 470, 799, 826 |
| Bme1390I | CCNGG | 1 cut(s) | 291 |
| Bme18I | GGWCC | 1 cut(s) | 833 |
| BmgT120I | GGNCC | 1 cut(s) | 833 |
| BmiI | GGNNCC | 1 cut(s) | 242 |
| BmrFI | CCNGG | 1 cut(s) | 291 |
| BmsI | GCATC | 1 cut(s) | 480 |
| BoxI | GACNNNNGTC | 1 cut(s) | 810 |
| BpiI | GAAGAC | 3 cut(s) | 69, 231, 806 |
| BpmI | CTGGAG | 1 cut(s) | 546 |
| BsaJI | CCNNGG | 2 cut(s) | 94, 393 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bse1I | ACTGG | 1 cut(s) | 326 |
| Bse21I | CCTNAGG | 1 cut(s) | 182 |
| BseBI | CCWGG | 1 cut(s) | 291 |
| BseDI | CCNNGG | 2 cut(s) | 94, 393 |
| BseGI | GGATG | 2 cut(s) | 34, 441 |
| BseMII | CTCAG | 4 cut(s) | 26, 173, 180, 375 |
| BseNI | ACTGG | 1 cut(s) | 326 |
| BseXI | GCAGC | 3 cut(s) | 455, 809, 836 |
| BshFI | GGCC | 2 cut(s) | 187, 294 |
| BslFI | GGGAC | 1 cut(s) | 398 |
| BsmFI | GGGAC | 1 cut(s) | 398 |
| BsnI | GGCC | 2 cut(s) | 187, 294 |
| Bsp143I | GATC | 3 cut(s) | 192, 309, 622 |
| BspANI | GGCC | 2 cut(s) | 187, 294 |
| BspCNI | CTCAG | 4 cut(s) | 27, 174, 181, 374 |
| BspLI | GGNNCC | 1 cut(s) | 242 |
| BspPI | GGATC | 1 cut(s) | 630 |
| BsrI | ACTGG | 1 cut(s) | 326 |
| BssECI | CCNNGG | 2 cut(s) | 94, 393 |
| BssMI | GATC | 3 cut(s) | 192, 309, 622 |
| BssT1I | CCWWGG | 1 cut(s) | 393 |
| Bst2UI | CCWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| Bst6I | CTCTTC | 1 cut(s) | 146 |
| BstC8I | GCNNGC | 1 cut(s) | 634 |
| BstDEI | CTNAG | 5 cut(s) | 35, 182, 189, 253, 361 |
| BstDSI | CCRYGG | 1 cut(s) | 94 |
| BstF5I | GGATG | 2 cut(s) | 34, 441 |
| BstKTI | GATC | 3 cut(s) | 195, 312, 625 |
| BstMBI | GATC | 3 cut(s) | 192, 309, 622 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 53, 642 |
| BstNI | CCWGG | 1 cut(s) | 291 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 810 |
| BstSCI | CCNGG | 1 cut(s) | 289 |
| BstV1I | GCAGC | 3 cut(s) | 455, 809, 836 |
| BstV2I | GAAGAC | 3 cut(s) | 69, 231, 806 |
| BstX2I | RGATCY | 1 cut(s) | 622 |
| BstYI | RGATCY | 1 cut(s) | 622 |
| Bsu36I | CCTNAGG | 1 cut(s) | 182 |
| BsuRI | GGCC | 2 cut(s) | 187, 294 |
| BtgI | CCRYGG | 1 cut(s) | 94 |
| BtgZI | GCGATG | 1 cut(s) | 582 |
| BtsCI | GGATG | 2 cut(s) | 34, 441 |
| Cac8I | GCNNGC | 1 cut(s) | 634 |
| Cfr13I | GGNCC | 1 cut(s) | 833 |
| Csp6I | GTAC | 1 cut(s) | 82 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 685, 720 |
| CviAII | CATG | 1 cut(s) | 606 |
| CviQI | GTAC | 1 cut(s) | 82 |
| DdeI | CTNAG | 5 cut(s) | 35, 182, 189, 253, 361 |
| DpnI | GATC | 3 cut(s) | 194, 311, 624 |
| DpnII | GATC | 3 cut(s) | 192, 309, 622 |
| Eam1104I | CTCTTC | 1 cut(s) | 146 |
| EarI | CTCTTC | 1 cut(s) | 146 |
| Eco130I | CCWWGG | 1 cut(s) | 393 |
| Eco147I | AGGCCT | 1 cut(s) | 187 |
| Eco47I | GGWCC | 1 cut(s) | 833 |
| Eco81I | CCTNAGG | 1 cut(s) | 182 |
| EcoRII | CCWGG | 1 cut(s) | 289 |
| EcoT14I | CCWWGG | 1 cut(s) | 393 |
| ErhI | CCWWGG | 1 cut(s) | 393 |
| FaeI | CATG | 1 cut(s) | 609 |
| FaiI | YATR | 7 cut(s) | 77, 545, 602, 607, 617, 647, 663 |
| FaqI | GGGAC | 1 cut(s) | 398 |
| FatI | CATG | 1 cut(s) | 605 |
| FblI | GTMKAC | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 3 cut(s) | 469, 798, 825 |
| FokI | GGATG | 2 cut(s) | 41, 428 |
| Fsp4HI | GCNGC | 3 cut(s) | 469, 798, 825 |
| FspBI | CTAG | 2 cut(s) | 372, 588 |
| GluI | GCNGC | 3 cut(s) | 469, 798, 825 |
| GsuI | CTGGAG | 1 cut(s) | 546 |
| HaeIII | GGCC | 2 cut(s) | 187, 294 |
| Hin1II | CATG | 1 cut(s) | 609 |
| HincII | GTYRAC | 1 cut(s) | 744 |
| HindII | GTYRAC | 1 cut(s) | 744 |
| HinfI | GANTC | 5 cut(s) | 70, 431, 453, 560, 573 |
| Hpy166II | GTNNAC | 2 cut(s) | 161, 744 |
| Hpy188I | TCNGA | 3 cut(s) | 364, 559, 652 |
| Hpy188III | TCNNGA | 6 cut(s) | 59, 196, 313, 372, 525, 818 |
| Hpy8I | GTNNAC | 2 cut(s) | 161, 744 |
| HpyAV | CCTTC | 2 cut(s) | 95, 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 4 cut(s) | 471, 632, 711, 775 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 53, 642 |
| HpyF3I | CTNAG | 5 cut(s) | 35, 182, 189, 253, 361 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92II | CATG | 1 cut(s) | 609 |
| Kzo9I | GATC | 3 cut(s) | 192, 309, 622 |
| LmnI | GCTCC | 3 cut(s) | 44, 246, 766 |
| Lsp1109I | GCAGC | 3 cut(s) | 455, 809, 836 |
| LweI | GCATC | 1 cut(s) | 480 |
| MaeI | CTAG | 2 cut(s) | 372, 588 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MalI | GATC | 3 cut(s) | 194, 311, 624 |
| MboI | GATC | 3 cut(s) | 192, 309, 622 |
| MboII | GAAGA | 7 cut(s) | 18, 74, 163, 227, 233, 236, 806 |
| MfeI | CAATTG | 1 cut(s) | 808 |
| MflI | RGATCY | 1 cut(s) | 622 |
| MluCI | AATT | 4 cut(s) | 175, 653, 770, 808 |
| MlyI | GAGTC | 2 cut(s) | 425, 447 |
| MnlI | CCTC | 4 cut(s) | 177, 194, 239, 757 |
| MseI | TTAA | 5 cut(s) | 335, 422, 627, 737, 785 |
| MspR9I | CCNGG | 1 cut(s) | 291 |
| MunI | CAATTG | 1 cut(s) | 808 |
| MvaI | CCWGG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 53, 642 |
| NdeII | GATC | 3 cut(s) | 192, 309, 622 |
| NlaIII | CATG | 1 cut(s) | 609 |
| NlaIV | GGNNCC | 1 cut(s) | 242 |
| PceI | AGGCCT | 1 cut(s) | 187 |
| PfeI | GAWTC | 3 cut(s) | 70, 560, 573 |
| PkrI | GCNGC | 3 cut(s) | 470, 799, 826 |
| PleI | GAGTC | 2 cut(s) | 425, 447 |
| PpsI | GAGTC | 2 cut(s) | 425, 447 |
| PshAI | GACNNNNGTC | 1 cut(s) | 810 |
| PshBI | ATTAAT | 1 cut(s) | 737 |
| Psp6I | CCWGG | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 289 |
| PspN4I | GGNNCC | 1 cut(s) | 242 |
| PspPI | GGNCC | 1 cut(s) | 833 |
| PsuI | RGATCY | 1 cut(s) | 622 |
| RsaI | GTAC | 1 cut(s) | 83 |
| RsaNI | GTAC | 1 cut(s) | 82 |
| SaqAI | TTAA | 5 cut(s) | 335, 422, 627, 737, 785 |
| SatI | GCNGC | 3 cut(s) | 469, 798, 825 |
| Sau3AI | GATC | 3 cut(s) | 192, 309, 622 |
| Sau96I | GGNCC | 1 cut(s) | 833 |
| SchI | GAGTC | 2 cut(s) | 425, 447 |
| ScrFI | CCNGG | 1 cut(s) | 291 |
| SfaNI | GCATC | 1 cut(s) | 480 |
| SinI | GGWCC | 1 cut(s) | 833 |
| Sse9I | AATT | 4 cut(s) | 175, 653, 770, 808 |
| SseBI | AGGCCT | 1 cut(s) | 187 |
| SspMI | CTAG | 2 cut(s) | 372, 588 |
| StuI | AGGCCT | 1 cut(s) | 187 |
| StyD4I | CCNGG | 1 cut(s) | 289 |
| StyI | CCWWGG | 1 cut(s) | 393 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TasI | AATT | 4 cut(s) | 175, 653, 770, 808 |
| TfiI | GAWTC | 3 cut(s) | 70, 560, 573 |
| Tru1I | TTAA | 5 cut(s) | 335, 422, 627, 737, 785 |
| Tru9I | TTAA | 5 cut(s) | 335, 422, 627, 737, 785 |
| TseI | GCWGC | 3 cut(s) | 468, 797, 824 |
| TspDTI | ATGAA | 4 cut(s) | 234, 430, 495, 604 |
| VpaK11BI | GGWCC | 1 cut(s) | 833 |
| VspI | ATTAAT | 1 cut(s) | 737 |
| XapI | RAATTY | 1 cut(s) | 653 |
| XbaI | TCTAGA | 1 cut(s) | 371 |
| XmiI | GTMKAC | 1 cut(s) | 160 |
| XspI | CTAG | 2 cut(s) | 372, 588 |