Rh7CG136900
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
11161094 .. 11166228
5135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG136900.1

Sequence Viewer

Length: 339 bp
ATGGTGGAGTTGGAAAAGCAGAGAATGCAGTTTGCTAAAGACTTGGAGGTTCAGAGAATGAGGATGTTCATGGACACACAGGTCCAGCTGGAGCGGATCAAGCACGGCAAGCGACCCGGCTCTAATGGTGAGCCAAATCTAACTGGCAAAAACTTCTTTCGGCATGCTTGCTGGACAGCCAAGAAAACAAAAGGTGTTCAAAGGAAAAGTCATAGAATTACGTCAATTAACCAAATGAGTTTACAACGATCTTGGATGACAGAAGTCACAACGGTTGGAGATTCATTGACGTGCTTTTTATTATTGGATATGTATCAGTTGTTACTTATATTAGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

112

Amino Acids

13.13

Weight (kDa)

10.01

Isoelectric Point (pI)

29.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022881)

Species Orthologous Gene IDs
rosa_laevigata RLG00000009150 RLG00000028783
rosa_samantha Rh5CG528100 Rh7CG136900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 80
AccBSI CCGCTC 1 cut(s) 94
AciI CCGC 1 cut(s) 94
AclWI GGATC 1 cut(s) 104
AgsI TTSAA 1 cut(s) 200
AjiI CACGTC 1 cut(s) 291
AluBI AGCT 1 cut(s) 88
AluI AGCT 1 cut(s) 88
AlwI GGATC 1 cut(s) 104
ArsI GACNNNNNNTTYG 2 cut(s) 193, 225
AspS9I GGNCC 1 cut(s) 82
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 140
AvaII GGWCC 1 cut(s) 82
BceAI ACGGC 1 cut(s) 121
BcnI CCSGG 1 cut(s) 117
Bme1390I CCNGG 1 cut(s) 117
Bme18I GGWCC 1 cut(s) 82
BmgBI CACGTC 1 cut(s) 291
BmgT120I GGNCC 1 cut(s) 82
BmrFI CCNGG 1 cut(s) 117
BoxI GACNNNNGTC 1 cut(s) 263
BpmI CTGGAG 1 cut(s) 110
BpuMI CCSGG 1 cut(s) 117
BsaBI GATNNNNATC 1 cut(s) 312
Bse1I ACTGG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 312
BseGI GGATG 2 cut(s) 69, 261
BseJI GATNNNNATC 1 cut(s) 312
BseNI ACTGG 1 cut(s) 148
BsiSI CCGG 1 cut(s) 117
BsmI GAATGC 1 cut(s) 30
Bsp143I GATC 2 cut(s) 96, 248
BspACI CCGC 1 cut(s) 94
BspPI GGATC 1 cut(s) 104
BsrBI CCGCTC 1 cut(s) 94
BsrI ACTGG 1 cut(s) 148
BssMI GATC 2 cut(s) 96, 248
Bst4CI ACNGT 1 cut(s) 274
BstAPI GCANNNNNTGC 1 cut(s) 25
BstC8I GCNNGC 3 cut(s) 110, 165, 169
BstF5I GGATG 2 cut(s) 69, 261
BstKTI GATC 2 cut(s) 99, 251
BstMBI GATC 2 cut(s) 96, 248
BstMWI GCNNNNNNNGC 3 cut(s) 25, 100, 109
BstNSI RCATGY 1 cut(s) 167
BstPAI GACNNNNGTC 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 115
BtrI CACGTC 1 cut(s) 291
BtsCI GGATG 2 cut(s) 69, 261
Cac8I GCNNGC 3 cut(s) 110, 165, 169
Cfr13I GGNCC 1 cut(s) 82
CviAII CATG 2 cut(s) 70, 164
CviJI RGCY 4 cut(s) 88, 120, 133, 179
CviKI_1 RGCY 4 cut(s) 88, 120, 133, 179
DpnI GATC 2 cut(s) 98, 250
DpnII GATC 2 cut(s) 96, 248
DrdI GACNNNNNNGTC 1 cut(s) 80
DseDI GACNNNNNNGTC 1 cut(s) 80
Eco47I GGWCC 1 cut(s) 82
FaeI CATG 2 cut(s) 73, 167
FaiI YATR 5 cut(s) 71, 165, 213, 311, 329
FatI CATG 2 cut(s) 69, 163
FokI GGATG 2 cut(s) 76, 268
GsuI CTGGAG 1 cut(s) 110
HapII CCGG 1 cut(s) 117
Hin1II CATG 2 cut(s) 73, 167
HinfI GANTC 1 cut(s) 281
HpaII CCGG 1 cut(s) 117
HphI GGTGA 1 cut(s) 140
Hpy166II GTNNAC 1 cut(s) 242
Hpy188I TCNGA 1 cut(s) 54
Hpy8I GTNNAC 1 cut(s) 242
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4IV ACGT 2 cut(s) 221, 290
HpyCH4V TGCA 1 cut(s) 28
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 100, 109
HpySE526I ACGT 2 cut(s) 221, 290
Hsp92II CATG 2 cut(s) 73, 167
Kzo9I GATC 2 cut(s) 96, 248
LmnI GCTCC 1 cut(s) 91
LpnPI CCDG 6 cut(s) 65, 74, 98, 129, 130, 157
MaeII ACGT 2 cut(s) 221, 290
MaeIII GTNAC 2 cut(s) 265, 321
MalI GATC 2 cut(s) 98, 250
MbiI CCGCTC 1 cut(s) 94
MboI GATC 2 cut(s) 96, 248
MluCI AATT 2 cut(s) 216, 225
MmeI TCCRAC 1 cut(s) 256
MnlI CCTC 2 cut(s) 40, 54
MseI TTAA 1 cut(s) 228
MslI CAYNNNNRTG 1 cut(s) 289
MspA1I CMGCKG 1 cut(s) 88
MspI CCGG 1 cut(s) 117
MspR9I CCNGG 1 cut(s) 117
Mva1269I GAATGC 1 cut(s) 30
MwoI GCNNNNNNNGC 3 cut(s) 25, 100, 109
NciI CCSGG 1 cut(s) 117
NdeII GATC 2 cut(s) 96, 248
NlaIII CATG 2 cut(s) 73, 167
NmuCI GTSAC 1 cut(s) 265
NspI RCATGY 1 cut(s) 167
PaeI GCATGC 1 cut(s) 167
PctI GAATGC 1 cut(s) 30
PfeI GAWTC 1 cut(s) 281
PshAI GACNNNNGTC 1 cut(s) 263
PspPI GGNCC 1 cut(s) 82
PvuII CAGCTG 1 cut(s) 88
RseI CAYNNNNRTG 1 cut(s) 289
SaqAI TTAA 1 cut(s) 228
Sau3AI GATC 2 cut(s) 96, 248
Sau96I GGNCC 1 cut(s) 82
ScrFI CCNGG 1 cut(s) 117
SetI ASST 6 cut(s) 51, 84, 90, 196, 224, 293
SinI GGWCC 1 cut(s) 82
SmiMI CAYNNNNRTG 1 cut(s) 289
SphI GCATGC 1 cut(s) 167
Sse9I AATT 2 cut(s) 216, 225
SsiI CCGC 1 cut(s) 94
StyD4I CCNGG 1 cut(s) 115
TaaI ACNGT 1 cut(s) 274
TaiI ACGT 2 cut(s) 224, 293
TasI AATT 2 cut(s) 216, 225
TfiI GAWTC 1 cut(s) 281
Tru1I TTAA 1 cut(s) 228
Tru9I TTAA 1 cut(s) 228
TseFI GTSAC 1 cut(s) 265
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 2 cut(s) 58, 273
VpaK11BI GGWCC 1 cut(s) 82
XceI RCATGY 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.