cell division cycle 5-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004235.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00221060 Rroxscaffold_6G00395710 |
| rosa_rugosa | Rorug07G0143200 |
| rosa_samantha | Rh3BG134500 Rh3CG137000 Rh3DG135800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 269 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AfaI | GTAC | 2 cut(s) | 192, 318 |
| AgsI | TTSAA | 3 cut(s) | 38, 176, 353 |
| AhlI | ACTAGT | 1 cut(s) | 286 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AlwI | GGATC | 1 cut(s) | 269 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| AseI | ATTAAT | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 109 |
| BbvI | GCAGC | 1 cut(s) | 176 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BcuI | ACTAGT | 1 cut(s) | 286 |
| BfaI | CTAG | 2 cut(s) | 272, 287 |
| BfmI | CTRYAG | 2 cut(s) | 110, 250 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BmsI | GCATC | 1 cut(s) | 80 |
| BsaBI | GATNNNNATC | 1 cut(s) | 150 |
| Bse3DI | GCAATG | 2 cut(s) | 247, 330 |
| Bse8I | GATNNNNATC | 1 cut(s) | 150 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseGI | GGATG | 1 cut(s) | 151 |
| BseJI | GATNNNNATC | 1 cut(s) | 150 |
| BseMI | GCAATG | 2 cut(s) | 247, 330 |
| BseXI | GCAGC | 1 cut(s) | 176 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| Bsp1286I | GDGCHC | 1 cut(s) | 109 |
| Bsp143I | GATC | 2 cut(s) | 151, 274 |
| BspMAI | CTGCAG | 1 cut(s) | 114 |
| BspPI | GGATC | 1 cut(s) | 269 |
| BsrDI | GCAATG | 2 cut(s) | 247, 330 |
| BssMI | GATC | 2 cut(s) | 151, 274 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| BstC8I | GCNNGC | 1 cut(s) | 169 |
| BstDEI | CTNAG | 1 cut(s) | 101 |
| BstF5I | GGATG | 1 cut(s) | 151 |
| BstKTI | GATC | 2 cut(s) | 154, 277 |
| BstMBI | GATC | 2 cut(s) | 151, 274 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 246 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstNSI | RCATGY | 1 cut(s) | 54 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BstSFI | CTRYAG | 2 cut(s) | 110, 250 |
| BstV1I | GCAGC | 1 cut(s) | 176 |
| BstX2I | RGATCY | 1 cut(s) | 274 |
| BstYI | RGATCY | 1 cut(s) | 274 |
| BtsCI | GGATG | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 1 cut(s) | 169 |
| Csp6I | GTAC | 2 cut(s) | 191, 317 |
| CviAII | CATG | 4 cut(s) | 8, 51, 210, 338 |
| CviJI | RGCY | 4 cut(s) | 107, 171, 249, 344 |
| CviKI_1 | RGCY | 4 cut(s) | 107, 171, 249, 344 |
| CviQI | GTAC | 2 cut(s) | 191, 317 |
| DdeI | CTNAG | 1 cut(s) | 101 |
| DpnI | GATC | 2 cut(s) | 153, 276 |
| DpnII | GATC | 2 cut(s) | 151, 274 |
| Eco24I | GRGCYC | 1 cut(s) | 109 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| EcoT38I | GRGCYC | 1 cut(s) | 109 |
| FaeI | CATG | 4 cut(s) | 11, 54, 213, 341 |
| FaiI | YATR | 6 cut(s) | 9, 52, 66, 211, 263, 339 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FatI | CATG | 4 cut(s) | 7, 50, 209, 337 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| FokI | GGATG | 1 cut(s) | 158 |
| FriOI | GRGCYC | 1 cut(s) | 109 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 2 cut(s) | 272, 287 |
| GluI | GCNGC | 1 cut(s) | 165 |
| Hin1II | CATG | 4 cut(s) | 11, 54, 213, 341 |
| HpyAV | CCTTC | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 112 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 246 |
| HpyF3I | CTNAG | 1 cut(s) | 101 |
| Hsp92II | CATG | 4 cut(s) | 11, 54, 213, 341 |
| Kzo9I | GATC | 2 cut(s) | 151, 274 |
| LpnPI | CCDG | 4 cut(s) | 69, 264, 279, 291 |
| Lsp1109I | GCAGC | 1 cut(s) | 176 |
| LweI | GCATC | 1 cut(s) | 80 |
| MaeI | CTAG | 2 cut(s) | 272, 287 |
| MalI | GATC | 2 cut(s) | 153, 276 |
| MboI | GATC | 2 cut(s) | 151, 274 |
| MboII | GAAGA | 2 cut(s) | 148, 188 |
| MflI | RGATCY | 1 cut(s) | 274 |
| MhlI | GDGCHC | 1 cut(s) | 109 |
| MluCI | AATT | 2 cut(s) | 29, 234 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 5 cut(s) | 32, 286, 293, 307, 334 |
| MseI | TTAA | 1 cut(s) | 233 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 246 |
| NdeII | GATC | 2 cut(s) | 151, 274 |
| NlaIII | CATG | 4 cut(s) | 11, 54, 213, 341 |
| NspI | RCATGY | 1 cut(s) | 54 |
| PfoI | TCCNGGA | 1 cut(s) | 277 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PshBI | ATTAAT | 1 cut(s) | 233 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PstI | CTGCAG | 1 cut(s) | 114 |
| PsuI | RGATCY | 1 cut(s) | 274 |
| RsaI | GTAC | 2 cut(s) | 192, 318 |
| RsaNI | GTAC | 2 cut(s) | 191, 317 |
| SaqAI | TTAA | 1 cut(s) | 233 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 2 cut(s) | 151, 274 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SduI | GDGCHC | 1 cut(s) | 109 |
| SetI | ASST | 6 cut(s) | 186, 192, 268, 273, 304, 318 |
| SfaNI | GCATC | 1 cut(s) | 80 |
| SfcI | CTRYAG | 2 cut(s) | 110, 250 |
| SpeI | ACTAGT | 1 cut(s) | 286 |
| Sse9I | AATT | 2 cut(s) | 29, 234 |
| SspI | AATATT | 1 cut(s) | 223 |
| SspMI | CTAG | 2 cut(s) | 272, 287 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 2 cut(s) | 29, 234 |
| Tru1I | TTAA | 1 cut(s) | 233 |
| Tru9I | TTAA | 1 cut(s) | 233 |
| TseI | GCWGC | 1 cut(s) | 164 |
| TspDTI | ATGAA | 3 cut(s) | 42, 105, 296 |
| VspI | ATTAAT | 1 cut(s) | 233 |
| XapI | RAATTY | 1 cut(s) | 29 |
| XceI | RCATGY | 1 cut(s) | 54 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 62 |
| XspI | CTAG | 2 cut(s) | 272, 287 |