Rroxscaffold_3G00221060
MYB Family

cell division cycle 5-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
3707680 .. 3709772
2093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00221060.1

Sequence Viewer

Length: 171 bp
ATGGAGAAGCTCCAGCGACAAAACAATCAGCGCAATGCTTATGGTGCATCAAGTATTGCTGGAAATGAGAAGAAACTTGGGGCTCTGCAGAATAAGTTTGAGAATGTGAGGAAGAAGTTGGATGATGATCTTGGGAAGGCAGCGAGCCTTGAAGAAAAGGTCAAGGTCTAA

Protein Analysis

56

Amino Acids

6.28

Weight (kDa)

9.63

Isoelectric Point (pI)

23.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0020071)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 152
AluBI AGCT 1 cut(s) 10
AluI AGCT 1 cut(s) 10
ApeKI GCWGC 1 cut(s) 140
AspLEI GCGC 1 cut(s) 33
BanII GRGCYC 1 cut(s) 85
BbvI GCAGC 1 cut(s) 152
BfmI CTRYAG 1 cut(s) 86
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
BmsI GCATC 1 cut(s) 56
BsaBI GATNNNNATC 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 40
Bse8I GATNNNNATC 1 cut(s) 126
BseGI GGATG 1 cut(s) 127
BseJI GATNNNNATC 1 cut(s) 126
BseMI GCAATG 1 cut(s) 40
BseXI GCAGC 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 85
Bsp143I GATC 1 cut(s) 127
BspMAI CTGCAG 1 cut(s) 90
BsrDI GCAATG 1 cut(s) 40
BssMI GATC 1 cut(s) 127
BstC8I GCNNGC 1 cut(s) 145
BstF5I GGATG 1 cut(s) 127
BstHHI GCGC 1 cut(s) 33
BstKTI GATC 1 cut(s) 130
BstMBI GATC 1 cut(s) 127
BstMWI GCNNNNNNNGC 1 cut(s) 44
BstSFI CTRYAG 1 cut(s) 86
BstV1I GCAGC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 145
CfoI GCGC 1 cut(s) 33
CviJI RGCY 3 cut(s) 10, 83, 147
CviKI_1 RGCY 3 cut(s) 10, 83, 147
DpnI GATC 1 cut(s) 129
DpnII GATC 1 cut(s) 127
Eco24I GRGCYC 1 cut(s) 85
EcoT38I GRGCYC 1 cut(s) 85
FaiI YATR 1 cut(s) 42
Fnu4HI GCNGC 1 cut(s) 141
FokI GGATG 1 cut(s) 134
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 1 cut(s) 141
GlaI GCGC 1 cut(s) 32
GluI GCNGC 1 cut(s) 141
HhaI GCGC 1 cut(s) 33
Hin6I GCGC 1 cut(s) 31
HinP1I GCGC 1 cut(s) 31
HpyAV CCTTC 1 cut(s) 130
HpyCH4V TGCA 2 cut(s) 47, 88
HpyF10VI GCNNNNNNNGC 1 cut(s) 44
HspAI GCGC 1 cut(s) 31
Kzo9I GATC 1 cut(s) 127
LmnI GCTCC 1 cut(s) 15
LpnPI CCDG 2 cut(s) 26, 45
Lsp1109I GCAGC 1 cut(s) 152
LweI GCATC 1 cut(s) 56
MalI GATC 1 cut(s) 129
MboI GATC 1 cut(s) 127
MboII GAAGA 3 cut(s) 82, 124, 164
MhlI GDGCHC 1 cut(s) 85
MmeI TCCRAC 1 cut(s) 99
MnlI CCTC 1 cut(s) 102
MwoI GCNNNNNNNGC 1 cut(s) 44
NdeII GATC 1 cut(s) 127
PkrI GCNGC 1 cut(s) 142
PstI CTGCAG 1 cut(s) 90
SatI GCNGC 1 cut(s) 141
Sau3AI GATC 1 cut(s) 127
SduI GDGCHC 1 cut(s) 85
SetI ASST 3 cut(s) 12, 162, 168
SfaNI GCATC 1 cut(s) 56
SfcI CTRYAG 1 cut(s) 86
SgeI CNNG 7 cut(s) 25, 63, 72, 89, 143, 156, 161
TseI GCWGC 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.