SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000018573 |
| rosa_multiflora | Rmu_sc0020230.1_g000001 |
| rosa_roxburghii | Rroxscaffold_165G00437070 Rroxscaffold_3G00235940 Rroxscaffold_6G00425270 |
| rosa_samantha | Rh7DG350900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 371 |
| AcsI | RAATTY | 2 cut(s) | 106, 302 |
| AgsI | TTSAA | 3 cut(s) | 35, 101, 122 |
| AluBI | AGCT | 1 cut(s) | 283 |
| AluI | AGCT | 1 cut(s) | 283 |
| Alw21I | GWGCWC | 1 cut(s) | 285 |
| ApoI | RAATTY | 2 cut(s) | 106, 302 |
| AseI | ATTAAT | 1 cut(s) | 270 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 109 |
| BanII | GRGCYC | 1 cut(s) | 285 |
| BbsI | GAAGAC | 1 cut(s) | 359 |
| Bbv12I | GWGCWC | 1 cut(s) | 285 |
| BccI | CCATC | 2 cut(s) | 287, 368 |
| BfmI | CTRYAG | 1 cut(s) | 336 |
| BpiI | GAAGAC | 1 cut(s) | 359 |
| Bse1I | ACTGG | 1 cut(s) | 181 |
| BseGI | GGATG | 2 cut(s) | 97, 379 |
| BseMII | CTCAG | 1 cut(s) | 387 |
| BseNI | ACTGG | 1 cut(s) | 181 |
| BseRI | GAGGAG | 1 cut(s) | 244 |
| BsiHKAI | GWGCWC | 1 cut(s) | 285 |
| BslFI | GGGAC | 1 cut(s) | 146 |
| BsmFI | GGGAC | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 1 cut(s) | 285 |
| BspACI | CCGC | 1 cut(s) | 371 |
| BspCNI | CTCAG | 1 cut(s) | 388 |
| BsrI | ACTGG | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 319 |
| Bst6I | CTCTTC | 1 cut(s) | 459 |
| BstDEI | CTNAG | 1 cut(s) | 396 |
| BstF5I | GGATG | 2 cut(s) | 97, 379 |
| BstSFI | CTRYAG | 1 cut(s) | 336 |
| BstV2I | GAAGAC | 1 cut(s) | 359 |
| BtsCI | GGATG | 2 cut(s) | 97, 379 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 160, 195 |
| CviJI | RGCY | 3 cut(s) | 160, 209, 283 |
| CviKI_1 | RGCY | 3 cut(s) | 160, 209, 283 |
| DdeI | CTNAG | 1 cut(s) | 396 |
| Eam1104I | CTCTTC | 1 cut(s) | 459 |
| EarI | CTCTTC | 1 cut(s) | 459 |
| Ecl136II | GAGCTC | 1 cut(s) | 283 |
| Eco24I | GRGCYC | 1 cut(s) | 285 |
| Eco53kI | GAGCTC | 1 cut(s) | 283 |
| EcoICRI | GAGCTC | 1 cut(s) | 283 |
| EcoT38I | GRGCYC | 1 cut(s) | 285 |
| FaiI | YATR | 6 cut(s) | 168, 189, 191, 254, 287, 402 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 94, 126 |
| FaqI | GGGAC | 1 cut(s) | 146 |
| FauNDI | CATATG | 1 cut(s) | 189 |
| FokI | GGATG | 2 cut(s) | 104, 386 |
| FriOI | GRGCYC | 1 cut(s) | 285 |
| HincII | GTYRAC | 1 cut(s) | 331 |
| HindII | GTYRAC | 1 cut(s) | 331 |
| HinfI | GANTC | 2 cut(s) | 35, 332 |
| Hpy166II | GTNNAC | 1 cut(s) | 331 |
| Hpy188III | TCNNGA | 1 cut(s) | 39 |
| Hpy8I | GTNNAC | 1 cut(s) | 331 |
| HpyAV | CCTTC | 4 cut(s) | 4, 67, 82, 452 |
| HpyCH4III | ACNGT | 1 cut(s) | 319 |
| HpyCH4V | TGCA | 1 cut(s) | 413 |
| HpyF3I | CTNAG | 1 cut(s) | 396 |
| LmnI | GCTCC | 1 cut(s) | 280 |
| LpnPI | CCDG | 3 cut(s) | 24, 162, 324 |
| MboII | GAAGA | 6 cut(s) | 61, 102, 215, 364, 467, 476 |
| MhlI | GDGCHC | 1 cut(s) | 285 |
| MluCI | AATT | 2 cut(s) | 106, 302 |
| MlyI | GAGTC | 1 cut(s) | 326 |
| MnlI | CCTC | 7 cut(s) | 9, 148, 222, 225, 235, 425, 460 |
| MroXI | GAANNNNTTC | 1 cut(s) | 109 |
| MseI | TTAA | 1 cut(s) | 270 |
| NdeI | CATATG | 1 cut(s) | 189 |
| PdmI | GAANNNNTTC | 1 cut(s) | 109 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PleI | GAGTC | 1 cut(s) | 326 |
| PpsI | GAGTC | 1 cut(s) | 326 |
| PshBI | ATTAAT | 1 cut(s) | 270 |
| Psp124BI | GAGCTC | 1 cut(s) | 285 |
| SacI | GAGCTC | 1 cut(s) | 285 |
| SaqAI | TTAA | 1 cut(s) | 270 |
| SchI | GAGTC | 1 cut(s) | 326 |
| SduI | GDGCHC | 1 cut(s) | 285 |
| SetI | ASST | 4 cut(s) | 25, 285, 343, 388 |
| SfcI | CTRYAG | 1 cut(s) | 336 |
| Sse9I | AATT | 2 cut(s) | 106, 302 |
| SsiI | CCGC | 1 cut(s) | 371 |
| SstI | GAGCTC | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 319 |
| TasI | AATT | 2 cut(s) | 106, 302 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| Tru1I | TTAA | 1 cut(s) | 270 |
| Tru9I | TTAA | 1 cut(s) | 270 |
| TspDTI | ATGAA | 2 cut(s) | 108, 206 |
| TspGWI | ACGGA | 1 cut(s) | 103 |
| VspI | ATTAAT | 1 cut(s) | 270 |
| XapI | RAATTY | 2 cut(s) | 106, 302 |
| XmnI | GAANNNNTTC | 1 cut(s) | 109 |