Myb/SANT-like DNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g38660 |
| rosa_chinensis | RchiOBHm_Chr6g0302651 |
| rosa_laevigata | RLG00000011151 |
| rosa_multiflora | Rmu_sc0005455.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00165470 |
| rosa_rugosa | Rorug06G0315800 |
| rosa_samantha | Rh6AG429100 Rh6BG473400 Rh6CG441400 Rh6DG428200 |
| rosa_wichuraiana | Rw6G037140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 293 |
| Acc36I | ACCTGC | 2 cut(s) | 673, 1582 |
| AccI | GTMKAC | 2 cut(s) | 434, 1581 |
| AccII | CGCG | 1 cut(s) | 1597 |
| AciI | CCGC | 5 cut(s) | 218, 241, 647, 1323, 1888 |
| AclI | AACGTT | 1 cut(s) | 1241 |
| AclWI | GGATC | 5 cut(s) | 1460, 1524, 1848, 1874, 1887 |
| AcsI | RAATTY | 1 cut(s) | 1217 |
| AcuI | CTGAAG | 1 cut(s) | 468 |
| AdeI | CACNNNGTG | 2 cut(s) | 808, 1781 |
| AfaI | GTAC | 3 cut(s) | 470, 971, 1385 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 21, 80, 1606, 1738 |
| AhlI | ACTAGT | 1 cut(s) | 1703 |
| AjnI | CCWGG | 3 cut(s) | 1000, 1075, 1875 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1473, 1505 |
| AluBI | AGCT | 8 cut(s) | 113, 417, 446, 532, 632, 864, 1052, 1757 |
| AluI | AGCT | 8 cut(s) | 113, 417, 446, 532, 632, 864, 1052, 1757 |
| Alw21I | GWGCWC | 1 cut(s) | 98 |
| Alw26I | GTCTC | 2 cut(s) | 326, 879 |
| AlwI | GGATC | 5 cut(s) | 1460, 1524, 1848, 1874, 1887 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1757 |
| Ama87I | CYCGRG | 1 cut(s) | 1400 |
| AoxI | GGCC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 9 cut(s) | 337, 784, 960, 1052, 1754, 1757, 1760, 1772, 1859 |
| ApoI | RAATTY | 1 cut(s) | 1217 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 184, 216 |
| AspLEI | GCGC | 2 cut(s) | 1599, 1641 |
| AspS9I | GGNCC | 1 cut(s) | 183 |
| AsuC2I | CCSGG | 1 cut(s) | 1732 |
| AsuHPI | GGTGA | 5 cut(s) | 397, 1091, 1259, 1262, 1796 |
| AsuNHI | GCTAGC | 1 cut(s) | 442 |
| AvaI | CYCGRG | 1 cut(s) | 1400 |
| AxyI | CCTNAGG | 1 cut(s) | 486 |
| BaeGI | GKGCMC | 1 cut(s) | 15 |
| BamHI | GGATCC | 1 cut(s) | 1879 |
| Bbv12I | GWGCWC | 1 cut(s) | 98 |
| BbvI | GCAGC | 9 cut(s) | 349, 796, 947, 1039, 1744, 1766, 1772, 1784, 1846 |
| BccI | CCATC | 6 cut(s) | 848, 1044, 1057, 1150, 1241, 1822 |
| BceAI | ACGGC | 1 cut(s) | 1700 |
| BciT130I | CCWGG | 3 cut(s) | 1002, 1077, 1877 |
| BciVI | GTATCC | 1 cut(s) | 1060 |
| BclI | TGATCA | 4 cut(s) | 124, 427, 847, 1315 |
| BcnI | CCSGG | 1 cut(s) | 1732 |
| BcoDI | GTCTC | 2 cut(s) | 326, 879 |
| BcuI | ACTAGT | 1 cut(s) | 1703 |
| BfaI | CTAG | 6 cut(s) | 75, 443, 1557, 1623, 1704, 1803 |
| BfmI | CTRYAG | 3 cut(s) | 19, 1575, 1758 |
| BfoI | RGCGCY | 1 cut(s) | 1642 |
| BfuAI | ACCTGC | 2 cut(s) | 673, 1582 |
| BfuI | GTATCC | 1 cut(s) | 1060 |
| BglII | AGATCT | 2 cut(s) | 77, 172 |
| Bme1390I | CCNGG | 4 cut(s) | 1002, 1077, 1732, 1877 |
| BmeT110I | CYCGRG | 1 cut(s) | 1400 |
| BmgT120I | GGNCC | 1 cut(s) | 183 |
| BmiI | GGNNCC | 1 cut(s) | 1881 |
| BmrFI | CCNGG | 4 cut(s) | 1002, 1077, 1732, 1877 |
| BmsI | GCATC | 4 cut(s) | 60, 663, 937, 1598 |
| BmtI | GCTAGC | 1 cut(s) | 446 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1715 |
| BpmI | CTGGAG | 1 cut(s) | 671 |
| BpuEI | CTTGAG | 3 cut(s) | 675, 1014, 1922 |
| BpuMI | CCSGG | 1 cut(s) | 1732 |
| BsaBI | GATNNNNATC | 2 cut(s) | 171, 426 |
| BsaI | GGTCTC | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 1 cut(s) | 1401 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 21, 80, 1606, 1738 |
| Bse1I | ACTGG | 4 cut(s) | 322, 412, 1134, 1237 |
| Bse21I | CCTNAGG | 1 cut(s) | 486 |
| Bse3DI | GCAATG | 1 cut(s) | 579 |
| Bse8I | GATNNNNATC | 2 cut(s) | 171, 426 |
| BseBI | CCWGG | 3 cut(s) | 1002, 1077, 1877 |
| BseDI | CCNNGG | 1 cut(s) | 1401 |
| BseGI | GGATG | 7 cut(s) | 427, 481, 859, 928, 1342, 1396, 1543 |
| BseJI | GATNNNNATC | 2 cut(s) | 171, 426 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 21, 80, 1606, 1738 |
| BseMI | GCAATG | 1 cut(s) | 579 |
| BseMII | CTCAG | 3 cut(s) | 24, 477, 1596 |
| BseNI | ACTGG | 4 cut(s) | 322, 412, 1134, 1237 |
| BseRI | GAGGAG | 1 cut(s) | 1696 |
| BseSI | GKGCMC | 1 cut(s) | 15 |
| BseXI | GCAGC | 9 cut(s) | 349, 796, 947, 1039, 1744, 1766, 1772, 1784, 1846 |
| BseYI | CCCAGC | 3 cut(s) | 38, 417, 864 |
| BsgI | GTGCAG | 1 cut(s) | 1041 |
| Bsh1236I | CGCG | 1 cut(s) | 1597 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BsiHKAI | GWGCWC | 1 cut(s) | 98 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1400 |
| BsiSI | CCGG | 1 cut(s) | 1732 |
| BslFI | GGGAC | 1 cut(s) | 881 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 21, 80, 1606, 1738 |
| BsmAI | GTCTC | 2 cut(s) | 326, 879 |
| BsmFI | GGGAC | 1 cut(s) | 881 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bso31I | GGTCTC | 1 cut(s) | 326 |
| BsoBI | CYCGRG | 1 cut(s) | 1400 |
| Bsp1286I | GDGCHC | 2 cut(s) | 15, 98 |
| BspACI | CCGC | 5 cut(s) | 218, 241, 647, 1323, 1888 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspCNI | CTCAG | 3 cut(s) | 25, 478, 1597 |
| BspFNI | CGCG | 1 cut(s) | 1597 |
| BspHI | TCATGA | 1 cut(s) | 1501 |
| BspLI | GGNNCC | 1 cut(s) | 1881 |
| BspMAI | CTGCAG | 2 cut(s) | 1579, 1762 |
| BspMI | ACCTGC | 2 cut(s) | 673, 1582 |
| BspOI | GCTAGC | 1 cut(s) | 446 |
| BspPI | GGATC | 5 cut(s) | 1460, 1524, 1848, 1874, 1887 |
| BspTNI | GGTCTC | 1 cut(s) | 326 |
| BsrDI | GCAATG | 1 cut(s) | 579 |
| BsrI | ACTGG | 4 cut(s) | 322, 412, 1134, 1237 |
| BssECI | CCNNGG | 1 cut(s) | 1401 |
| BssNAI | GTATAC | 1 cut(s) | 435 |
| Bst1107I | GTATAC | 1 cut(s) | 435 |
| Bst2UI | CCWGG | 3 cut(s) | 1002, 1077, 1877 |
| Bst4CI | ACNGT | 8 cut(s) | 439, 746, 978, 1123, 1257, 1309, 1343, 1414 |
| Bst6I | CTCTTC | 3 cut(s) | 365, 1077, 1279 |
| BstC8I | GCNNGC | 2 cut(s) | 27, 444 |
| BstDEI | CTNAG | 7 cut(s) | 33, 207, 365, 486, 633, 1280, 1605 |
| BstEII | GGTNACC | 1 cut(s) | 1784 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 19, 1604 |
| BstF5I | GGATG | 7 cut(s) | 427, 481, 859, 928, 1342, 1396, 1543 |
| BstFNI | CGCG | 1 cut(s) | 1597 |
| BstH2I | RGCGCY | 1 cut(s) | 1642 |
| BstHHI | GCGC | 2 cut(s) | 1599, 1641 |
| BstMAI | GTCTC | 2 cut(s) | 326, 879 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 35, 232, 1574, 1760, 1769 |
| BstNI | CCWGG | 3 cut(s) | 1002, 1077, 1877 |
| BstNSI | RCATGY | 1 cut(s) | 578 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1715 |
| BstPI | GGTNACC | 1 cut(s) | 1784 |
| BstSCI | CCNGG | 4 cut(s) | 1000, 1075, 1730, 1875 |
| BstSFI | CTRYAG | 3 cut(s) | 19, 1575, 1758 |
| BstSLI | GKGCMC | 1 cut(s) | 15 |
| BstUI | CGCG | 1 cut(s) | 1597 |
| BstV1I | GCAGC | 9 cut(s) | 349, 796, 947, 1039, 1744, 1766, 1772, 1784, 1846 |
| BstX2I | RGATCY | 4 cut(s) | 77, 172, 1465, 1879 |
| BstYI | RGATCY | 4 cut(s) | 77, 172, 1465, 1879 |
| BstZ17I | GTATAC | 1 cut(s) | 435 |
| Bsu36I | CCTNAGG | 1 cut(s) | 486 |
| BsuI | GTATCC | 1 cut(s) | 1060 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtgZI | GCGATG | 1 cut(s) | 915 |
| BtsCI | GGATG | 7 cut(s) | 427, 481, 859, 928, 1342, 1396, 1543 |
| BtsI | GCAGTG | 3 cut(s) | 839, 1012, 1029 |
| BtsIMutI | CAGTG | 5 cut(s) | 405, 839, 1012, 1029, 1127 |
| BveI | ACCTGC | 2 cut(s) | 673, 1582 |
| Cac8I | GCNNGC | 2 cut(s) | 27, 444 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1757 |
| CciI | TCATGA | 1 cut(s) | 1501 |
| CfoI | GCGC | 2 cut(s) | 1599, 1641 |
| Cfr13I | GGNCC | 1 cut(s) | 183 |
| Csp6I | GTAC | 3 cut(s) | 469, 970, 1384 |
| CviQI | GTAC | 3 cut(s) | 469, 970, 1384 |
| DdeI | CTNAG | 7 cut(s) | 33, 207, 365, 486, 633, 1280, 1605 |
| DraI | TTTAAA | 1 cut(s) | 1441 |
| DraIII | CACNNNGTG | 2 cut(s) | 808, 1781 |
| Eam1104I | CTCTTC | 3 cut(s) | 365, 1077, 1279 |
| EarI | CTCTTC | 3 cut(s) | 365, 1077, 1279 |
| Eco31I | GGTCTC | 1 cut(s) | 326 |
| Eco32I | GATATC | 2 cut(s) | 1800, 1921 |
| Eco57I | CTGAAG | 1 cut(s) | 468 |
| Eco81I | CCTNAGG | 1 cut(s) | 486 |
| Eco88I | CYCGRG | 1 cut(s) | 1400 |
| Eco91I | GGTNACC | 1 cut(s) | 1784 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 19, 1604 |
| EcoO65I | GGTNACC | 1 cut(s) | 1784 |
| EcoRI | GAATTC | 1 cut(s) | 1217 |
| EcoRII | CCWGG | 3 cut(s) | 1000, 1075, 1875 |
| EcoRV | GATATC | 2 cut(s) | 1800, 1921 |
| EcoT22I | ATGCAT | 2 cut(s) | 678, 1454 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 97, 129 |
| FaqI | GGGAC | 1 cut(s) | 881 |
| FauNDI | CATATG | 1 cut(s) | 1904 |
| FbaI | TGATCA | 4 cut(s) | 124, 427, 847, 1315 |
| FblI | GTMKAC | 2 cut(s) | 434, 1581 |
| FokI | GGATG | 7 cut(s) | 434, 468, 866, 915, 1349, 1383, 1550 |
| FspBI | CTAG | 6 cut(s) | 75, 443, 1557, 1623, 1704, 1803 |
| GlaI | GCGC | 2 cut(s) | 1598, 1640 |
| GsaI | CCCAGC | 3 cut(s) | 42, 421, 868 |
| GsuI | CTGGAG | 1 cut(s) | 671 |
| HaeII | RGCGCY | 1 cut(s) | 1642 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| HapII | CCGG | 1 cut(s) | 1732 |
| HhaI | GCGC | 2 cut(s) | 1599, 1641 |
| Hin6I | GCGC | 2 cut(s) | 1597, 1639 |
| HinP1I | GCGC | 2 cut(s) | 1597, 1639 |
| HinfI | GANTC | 6 cut(s) | 101, 394, 561, 951, 1264, 1791 |
| HpaII | CCGG | 1 cut(s) | 1732 |
| HphI | GGTGA | 5 cut(s) | 397, 1091, 1259, 1262, 1796 |
| Hpy166II | GTNNAC | 5 cut(s) | 435, 639, 1119, 1253, 1582 |
| Hpy8I | GTNNAC | 5 cut(s) | 435, 639, 1119, 1253, 1582 |
| Hpy99I | CGWCG | 1 cut(s) | 1597 |
| HpyAV | CCTTC | 5 cut(s) | 25, 382, 649, 810, 1186 |
| HpyCH4III | ACNGT | 8 cut(s) | 439, 746, 978, 1123, 1257, 1309, 1343, 1414 |
| HpyCH4IV | ACGT | 2 cut(s) | 1241, 1488 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 35, 232, 1574, 1760, 1769 |
| HpyF3I | CTNAG | 7 cut(s) | 33, 207, 365, 486, 633, 1280, 1605 |
| HpySE526I | ACGT | 2 cut(s) | 1241, 1488 |
| HspAI | GCGC | 2 cut(s) | 1597, 1639 |
| Ksp22I | TGATCA | 4 cut(s) | 124, 427, 847, 1315 |
| LmnI | GCTCC | 1 cut(s) | 1159 |
| Lsp1109I | GCAGC | 9 cut(s) | 349, 796, 947, 1039, 1744, 1766, 1772, 1784, 1846 |
| LweI | GCATC | 4 cut(s) | 60, 663, 937, 1598 |
| MaeI | CTAG | 6 cut(s) | 75, 443, 1557, 1623, 1704, 1803 |
| MaeII | ACGT | 2 cut(s) | 1241, 1488 |
| MaeIII | GTNAC | 1 cut(s) | 1784 |
| MboII | GAAGA | 9 cut(s) | 298, 358, 382, 461, 1064, 1094, 1296, 1494, 1641 |
| MfeI | CAATTG | 1 cut(s) | 341 |
| MflI | RGATCY | 4 cut(s) | 77, 172, 1465, 1879 |
| MhlI | GDGCHC | 2 cut(s) | 15, 98 |
| MlyI | GAGTC | 1 cut(s) | 960 |
| MmeI | TCCRAC | 2 cut(s) | 960, 1494 |
| Mph1103I | ATGCAT | 2 cut(s) | 678, 1454 |
| MseI | TTAA | 6 cut(s) | 117, 753, 770, 1145, 1238, 1440 |
| MslI | CAYNNNNRTG | 4 cut(s) | 357, 1272, 1814, 1903 |
| MspA1I | CMGCKG | 2 cut(s) | 649, 1757 |
| MspI | CCGG | 1 cut(s) | 1732 |
| MspR9I | CCNGG | 4 cut(s) | 1002, 1077, 1732, 1877 |
| MunI | CAATTG | 1 cut(s) | 341 |
| MvaI | CCWGG | 3 cut(s) | 1002, 1077, 1877 |
| MvnI | CGCG | 1 cut(s) | 1597 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 35, 232, 1574, 1760, 1769 |
| NciI | CCSGG | 1 cut(s) | 1732 |
| NdeI | CATATG | 1 cut(s) | 1904 |
| NheI | GCTAGC | 1 cut(s) | 442 |
| NlaIV | GGNNCC | 1 cut(s) | 1881 |
| NmuCI | GTSAC | 1 cut(s) | 1784 |
| NsiI | ATGCAT | 2 cut(s) | 678, 1454 |
| NspI | RCATGY | 1 cut(s) | 578 |
| PagI | TCATGA | 1 cut(s) | 1501 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 389 |
| PfeI | GAWTC | 5 cut(s) | 101, 394, 561, 1264, 1791 |
| PfoI | TCCNGGA | 1 cut(s) | 1875 |
| PleI | GAGTC | 1 cut(s) | 959 |
| PpsI | GAGTC | 1 cut(s) | 959 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1715 |
| PsiI | TTATAA | 1 cut(s) | 293 |
| Psp1406I | AACGTT | 1 cut(s) | 1241 |
| Psp6I | CCWGG | 3 cut(s) | 1000, 1075, 1875 |
| PspEI | GGTNACC | 1 cut(s) | 1784 |
| PspFI | CCCAGC | 3 cut(s) | 38, 417, 864 |
| PspGI | CCWGG | 3 cut(s) | 1000, 1075, 1875 |
| PspN4I | GGNNCC | 1 cut(s) | 1881 |
| PspPI | GGNCC | 1 cut(s) | 183 |
| PstI | CTGCAG | 2 cut(s) | 1579, 1762 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1757 |
| PsuI | RGATCY | 4 cut(s) | 77, 172, 1465, 1879 |
| PvuII | CAGCTG | 1 cut(s) | 1757 |
| RsaI | GTAC | 3 cut(s) | 470, 971, 1385 |
| RsaNI | GTAC | 3 cut(s) | 469, 970, 1384 |
| RseI | CAYNNNNRTG | 4 cut(s) | 357, 1272, 1814, 1903 |
| SaqAI | TTAA | 6 cut(s) | 117, 753, 770, 1145, 1238, 1440 |
| Sau96I | GGNCC | 1 cut(s) | 183 |
| SchI | GAGTC | 1 cut(s) | 960 |
| ScrFI | CCNGG | 4 cut(s) | 1002, 1077, 1732, 1877 |
| SduI | GDGCHC | 2 cut(s) | 15, 98 |
| SfaNI | GCATC | 4 cut(s) | 60, 663, 937, 1598 |
| SfcI | CTRYAG | 3 cut(s) | 19, 1575, 1758 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 357, 1272, 1814, 1903 |
| SmlI | CTYRAG | 3 cut(s) | 690, 1029, 1937 |
| SmoI | CTYRAG | 3 cut(s) | 690, 1029, 1937 |
| SpeI | ACTAGT | 1 cut(s) | 1703 |
| SsiI | CCGC | 5 cut(s) | 218, 241, 647, 1323, 1888 |
| SspMI | CTAG | 6 cut(s) | 75, 443, 1557, 1623, 1704, 1803 |
| StyD4I | CCNGG | 4 cut(s) | 1000, 1075, 1730, 1875 |
| TaaI | ACNGT | 8 cut(s) | 439, 746, 978, 1123, 1257, 1309, 1343, 1414 |
| TaiI | ACGT | 2 cut(s) | 1244, 1491 |
| TaqI | TCGA | 4 cut(s) | 203, 757, 921, 1796 |
| TaqII | GACCGA | 1 cut(s) | 1803 |
| TatI | WGTACW | 2 cut(s) | 468, 1383 |
| TauI | GCSGC | 1 cut(s) | 649 |
| TfiI | GAWTC | 5 cut(s) | 101, 394, 561, 1264, 1791 |
| Tru1I | TTAA | 6 cut(s) | 117, 753, 770, 1145, 1238, 1440 |
| Tru9I | TTAA | 6 cut(s) | 117, 753, 770, 1145, 1238, 1440 |
| TscAI | CASTG | 5 cut(s) | 412, 846, 1012, 1029, 1134 |
| TseFI | GTSAC | 1 cut(s) | 1784 |
| TseI | GCWGC | 9 cut(s) | 337, 784, 960, 1052, 1754, 1757, 1760, 1772, 1859 |
| Tsp45I | GTSAC | 1 cut(s) | 1784 |
| TspDTI | ATGAA | 5 cut(s) | 468, 540, 1230, 1383, 1891 |
| TspGWI | ACGGA | 2 cut(s) | 20, 819 |
| TspRI | CASTG | 5 cut(s) | 412, 846, 1012, 1029, 1134 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 19, 1604 |
| XapI | RAATTY | 1 cut(s) | 1217 |
| XceI | RCATGY | 1 cut(s) | 578 |
| XmiI | GTMKAC | 2 cut(s) | 434, 1581 |
| XspI | CTAG | 6 cut(s) | 75, 443, 1557, 1623, 1704, 1803 |
| Zsp2I | ATGCAT | 2 cut(s) | 678, 1454 |