Myb/SANT-like DNA-binding domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g38660 |
| rosa_chinensis | RchiOBHm_Chr6g0302651 |
| rosa_laevigata | RLG00000011151 |
| rosa_multiflora | Rmu_sc0005455.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00165470 |
| rosa_rugosa | Rorug06G0315800 |
| rosa_samantha | Rh6AG429100 Rh6BG473400 Rh6CG441400 Rh6DG428200 |
| rosa_wichuraiana | Rw6G037140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 146 |
| Acc36I | ACCTGC | 2 cut(s) | 526, 1435 |
| AccI | GTMKAC | 2 cut(s) | 287, 1434 |
| AccII | CGCG | 1 cut(s) | 1450 |
| AciI | CCGC | 5 cut(s) | 71, 94, 500, 1176, 1744 |
| AclI | AACGTT | 1 cut(s) | 1094 |
| AclWI | GGATC | 5 cut(s) | 1313, 1377, 1704, 1730, 1743 |
| AcsI | RAATTY | 1 cut(s) | 1070 |
| AcuI | CTGAAG | 1 cut(s) | 321 |
| AcyI | GRCGYC | 1 cut(s) | 1569 |
| AdeI | CACNNNGTG | 2 cut(s) | 661, 1637 |
| AfaI | GTAC | 3 cut(s) | 323, 824, 1238 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1459, 1482, 1591 |
| AhlI | ACTAGT | 1 cut(s) | 1556 |
| AjnI | CCWGG | 3 cut(s) | 853, 928, 1731 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1326, 1358 |
| AluBI | AGCT | 6 cut(s) | 299, 385, 485, 717, 905, 1613 |
| AluI | AGCT | 6 cut(s) | 299, 385, 485, 717, 905, 1613 |
| Alw26I | GTCTC | 2 cut(s) | 179, 732 |
| AlwI | GGATC | 5 cut(s) | 1313, 1377, 1704, 1730, 1743 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1613 |
| Ama87I | CYCGRG | 1 cut(s) | 1253 |
| AoxI | GGCC | 2 cut(s) | 36, 1797 |
| ApoI | RAATTY | 1 cut(s) | 1070 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 37, 69 |
| AspLEI | GCGC | 3 cut(s) | 880, 1452, 1494 |
| AspS9I | GGNCC | 1 cut(s) | 36 |
| AsuC2I | CCSGG | 1 cut(s) | 1585 |
| AsuHPI | GGTGA | 5 cut(s) | 250, 944, 1112, 1115, 1652 |
| AsuNHI | GCTAGC | 1 cut(s) | 295 |
| AvaI | CYCGRG | 1 cut(s) | 1253 |
| AxyI | CCTNAGG | 1 cut(s) | 339 |
| BamHI | GGATCC | 1 cut(s) | 1735 |
| BccI | CCATC | 5 cut(s) | 701, 910, 1003, 1094, 1678 |
| BciT130I | CCWGG | 3 cut(s) | 855, 930, 1733 |
| BciVI | GTATCC | 1 cut(s) | 913 |
| BclI | TGATCA | 3 cut(s) | 280, 700, 1168 |
| BcnI | CCSGG | 1 cut(s) | 1585 |
| BcoDI | GTCTC | 2 cut(s) | 179, 732 |
| BcuI | ACTAGT | 1 cut(s) | 1556 |
| BfaI | CTAG | 4 cut(s) | 296, 1410, 1557, 1659 |
| BfmI | CTRYAG | 2 cut(s) | 1428, 1614 |
| BfoI | RGCGCY | 2 cut(s) | 881, 1495 |
| BfuAI | ACCTGC | 2 cut(s) | 526, 1435 |
| BfuI | GTATCC | 1 cut(s) | 913 |
| Bme1390I | CCNGG | 4 cut(s) | 855, 930, 1585, 1733 |
| BmeT110I | CYCGRG | 1 cut(s) | 1253 |
| BmgT120I | GGNCC | 1 cut(s) | 36 |
| BmiI | GGNNCC | 1 cut(s) | 1737 |
| BmrFI | CCNGG | 4 cut(s) | 855, 930, 1585, 1733 |
| BmsI | GCATC | 2 cut(s) | 516, 790 |
| BmtI | GCTAGC | 1 cut(s) | 299 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1568 |
| BpmI | CTGGAG | 1 cut(s) | 524 |
| BpuEI | CTTGAG | 4 cut(s) | 528, 551, 867, 1778 |
| BpuMI | CCSGG | 1 cut(s) | 1585 |
| BsaBI | GATNNNNATC | 2 cut(s) | 24, 279 |
| BsaHI | GRCGYC | 1 cut(s) | 1569 |
| BsaI | GGTCTC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 2 cut(s) | 1254, 1458 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1459, 1482, 1591 |
| Bse1I | ACTGG | 6 cut(s) | 175, 265, 987, 1090, 1476, 1570 |
| Bse21I | CCTNAGG | 1 cut(s) | 339 |
| Bse3DI | GCAATG | 1 cut(s) | 432 |
| Bse8I | GATNNNNATC | 2 cut(s) | 24, 279 |
| BseBI | CCWGG | 3 cut(s) | 855, 930, 1733 |
| BseDI | CCNNGG | 2 cut(s) | 1254, 1458 |
| BseGI | GGATG | 7 cut(s) | 280, 334, 712, 781, 1195, 1249, 1396 |
| BseJI | GATNNNNATC | 2 cut(s) | 24, 279 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1459, 1482, 1591 |
| BseMI | GCAATG | 1 cut(s) | 432 |
| BseMII | CTCAG | 2 cut(s) | 330, 1124 |
| BseNI | ACTGG | 6 cut(s) | 175, 265, 987, 1090, 1476, 1570 |
| BseRI | GAGGAG | 3 cut(s) | 485, 1549, 1607 |
| BseYI | CCCAGC | 1 cut(s) | 717 |
| BsgI | GTGCAG | 1 cut(s) | 894 |
| Bsh1236I | CGCG | 1 cut(s) | 1450 |
| BshFI | GGCC | 2 cut(s) | 38, 1799 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1253 |
| BsiSI | CCGG | 2 cut(s) | 1495, 1585 |
| BslFI | GGGAC | 2 cut(s) | 734, 872 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1459, 1482, 1591 |
| BsmAI | GTCTC | 2 cut(s) | 179, 732 |
| BsmFI | GGGAC | 2 cut(s) | 734, 872 |
| BsnI | GGCC | 2 cut(s) | 38, 1799 |
| Bso31I | GGTCTC | 1 cut(s) | 179 |
| BsoBI | CYCGRG | 1 cut(s) | 1253 |
| BspACI | CCGC | 5 cut(s) | 71, 94, 500, 1176, 1744 |
| BspANI | GGCC | 2 cut(s) | 38, 1799 |
| BspCNI | CTCAG | 2 cut(s) | 331, 1125 |
| BspFNI | CGCG | 1 cut(s) | 1450 |
| BspHI | TCATGA | 1 cut(s) | 1354 |
| BspLI | GGNNCC | 1 cut(s) | 1737 |
| BspMAI | CTGCAG | 2 cut(s) | 1432, 1618 |
| BspMI | ACCTGC | 2 cut(s) | 526, 1435 |
| BspOI | GCTAGC | 1 cut(s) | 299 |
| BspPI | GGATC | 5 cut(s) | 1313, 1377, 1704, 1730, 1743 |
| BspTNI | GGTCTC | 1 cut(s) | 179 |
| BsrDI | GCAATG | 1 cut(s) | 432 |
| BsrI | ACTGG | 6 cut(s) | 175, 265, 987, 1090, 1476, 1570 |
| BssECI | CCNNGG | 2 cut(s) | 1254, 1458 |
| BssNAI | GTATAC | 1 cut(s) | 288 |
| BssNI | GRCGYC | 1 cut(s) | 1569 |
| Bst1107I | GTATAC | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 3 cut(s) | 855, 930, 1733 |
| Bst4CI | ACNGT | 9 cut(s) | 292, 599, 822, 831, 976, 1110, 1162, 1196, 1267 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 930 |
| BstACI | GRCGYC | 1 cut(s) | 1569 |
| BstC8I | GCNNGC | 1 cut(s) | 297 |
| BstDEI | CTNAG | 5 cut(s) | 218, 339, 486, 680, 1133 |
| BstEII | GGTNACC | 1 cut(s) | 1640 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1457 |
| BstF5I | GGATG | 7 cut(s) | 280, 334, 712, 781, 1195, 1249, 1396 |
| BstFNI | CGCG | 1 cut(s) | 1450 |
| BstH2I | RGCGCY | 2 cut(s) | 881, 1495 |
| BstHHI | GCGC | 3 cut(s) | 880, 1452, 1494 |
| BstMAI | GTCTC | 2 cut(s) | 179, 732 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 85, 1427, 1616, 1625 |
| BstNI | CCWGG | 3 cut(s) | 855, 930, 1733 |
| BstNSI | RCATGY | 1 cut(s) | 431 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1568 |
| BstPI | GGTNACC | 1 cut(s) | 1640 |
| BstSCI | CCNGG | 4 cut(s) | 853, 928, 1583, 1731 |
| BstSFI | CTRYAG | 2 cut(s) | 1428, 1614 |
| BstUI | CGCG | 1 cut(s) | 1450 |
| BstX2I | RGATCY | 2 cut(s) | 1318, 1735 |
| BstYI | RGATCY | 2 cut(s) | 1318, 1735 |
| BstZ17I | GTATAC | 1 cut(s) | 288 |
| Bsu36I | CCTNAGG | 1 cut(s) | 339 |
| BsuI | GTATCC | 1 cut(s) | 913 |
| BsuRI | GGCC | 2 cut(s) | 38, 1799 |
| BtgZI | GCGATG | 1 cut(s) | 768 |
| BtsCI | GGATG | 7 cut(s) | 280, 334, 712, 781, 1195, 1249, 1396 |
| BtsI | GCAGTG | 3 cut(s) | 118, 692, 865 |
| BtsIMutI | CAGTG | 7 cut(s) | 118, 258, 692, 818, 865, 980, 1483 |
| BveI | ACCTGC | 2 cut(s) | 526, 1435 |
| Cac8I | GCNNGC | 1 cut(s) | 297 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1613 |
| CciI | TCATGA | 1 cut(s) | 1354 |
| CfoI | GCGC | 3 cut(s) | 880, 1452, 1494 |
| Cfr13I | GGNCC | 1 cut(s) | 36 |
| CseI | GACGC | 1 cut(s) | 1558 |
| Csp6I | GTAC | 3 cut(s) | 322, 823, 1237 |
| CviQI | GTAC | 3 cut(s) | 322, 823, 1237 |
| DdeI | CTNAG | 5 cut(s) | 218, 339, 486, 680, 1133 |
| DraI | TTTAAA | 1 cut(s) | 1294 |
| DraIII | CACNNNGTG | 2 cut(s) | 661, 1637 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 930 |
| EarI | CTCTTC | 2 cut(s) | 218, 930 |
| Eco31I | GGTCTC | 1 cut(s) | 179 |
| Eco32I | GATATC | 2 cut(s) | 1656, 1777 |
| Eco57I | CTGAAG | 1 cut(s) | 321 |
| Eco81I | CCTNAGG | 1 cut(s) | 339 |
| Eco88I | CYCGRG | 1 cut(s) | 1253 |
| Eco91I | GGTNACC | 1 cut(s) | 1640 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1457 |
| EcoO65I | GGTNACC | 1 cut(s) | 1640 |
| EcoRI | GAATTC | 1 cut(s) | 1070 |
| EcoRII | CCWGG | 3 cut(s) | 853, 928, 1731 |
| EcoRV | GATATC | 2 cut(s) | 1656, 1777 |
| FaqI | GGGAC | 2 cut(s) | 734, 872 |
| FauNDI | CATATG | 1 cut(s) | 1760 |
| FbaI | TGATCA | 3 cut(s) | 280, 700, 1168 |
| FblI | GTMKAC | 2 cut(s) | 287, 1434 |
| FokI | GGATG | 7 cut(s) | 287, 321, 719, 768, 1202, 1236, 1403 |
| FspBI | CTAG | 4 cut(s) | 296, 1410, 1557, 1659 |
| GlaI | GCGC | 3 cut(s) | 879, 1451, 1493 |
| GsaI | CCCAGC | 1 cut(s) | 721 |
| GsuI | CTGGAG | 1 cut(s) | 524 |
| HaeII | RGCGCY | 2 cut(s) | 881, 1495 |
| HaeIII | GGCC | 2 cut(s) | 38, 1799 |
| HapII | CCGG | 2 cut(s) | 1495, 1585 |
| HgaI | GACGC | 1 cut(s) | 1558 |
| HhaI | GCGC | 3 cut(s) | 880, 1452, 1494 |
| Hin1I | GRCGYC | 1 cut(s) | 1569 |
| Hin6I | GCGC | 3 cut(s) | 878, 1450, 1492 |
| HinP1I | GCGC | 3 cut(s) | 878, 1450, 1492 |
| HinfI | GANTC | 5 cut(s) | 247, 414, 804, 1117, 1647 |
| HpaII | CCGG | 2 cut(s) | 1495, 1585 |
| HphI | GGTGA | 5 cut(s) | 250, 944, 1112, 1115, 1652 |
| Hpy166II | GTNNAC | 5 cut(s) | 288, 492, 972, 1106, 1435 |
| Hpy8I | GTNNAC | 5 cut(s) | 288, 492, 972, 1106, 1435 |
| Hpy99I | CGWCG | 1 cut(s) | 1450 |
| HpyAV | CCTTC | 6 cut(s) | 235, 502, 663, 1039, 1131, 1476 |
| HpyCH4III | ACNGT | 9 cut(s) | 292, 599, 822, 831, 976, 1110, 1162, 1196, 1267 |
| HpyCH4IV | ACGT | 3 cut(s) | 1094, 1341, 1445 |
| HpyCH4V | TGCA | 9 cut(s) | 390, 518, 735, 746, 875, 1305, 1430, 1616, 1665 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 85, 1427, 1616, 1625 |
| HpyF3I | CTNAG | 5 cut(s) | 218, 339, 486, 680, 1133 |
| HpySE526I | ACGT | 3 cut(s) | 1094, 1341, 1445 |
| Hsp92I | GRCGYC | 1 cut(s) | 1569 |
| HspAI | GCGC | 3 cut(s) | 878, 1450, 1492 |
| Ksp22I | TGATCA | 3 cut(s) | 280, 700, 1168 |
| LmnI | GCTCC | 2 cut(s) | 472, 1012 |
| LweI | GCATC | 2 cut(s) | 516, 790 |
| MaeI | CTAG | 4 cut(s) | 296, 1410, 1557, 1659 |
| MaeII | ACGT | 3 cut(s) | 1094, 1341, 1445 |
| MaeIII | GTNAC | 2 cut(s) | 690, 1640 |
| MboII | GAAGA | 7 cut(s) | 151, 211, 235, 314, 917, 947, 1347 |
| MfeI | CAATTG | 1 cut(s) | 194 |
| MflI | RGATCY | 2 cut(s) | 1318, 1735 |
| MlyI | GAGTC | 1 cut(s) | 813 |
| MmeI | TCCRAC | 2 cut(s) | 813, 1347 |
| MseI | TTAA | 5 cut(s) | 606, 623, 998, 1091, 1293 |
| MslI | CAYNNNNRTG | 4 cut(s) | 210, 1125, 1670, 1759 |
| MspA1I | CMGCKG | 2 cut(s) | 502, 1613 |
| MspI | CCGG | 2 cut(s) | 1495, 1585 |
| MspR9I | CCNGG | 4 cut(s) | 855, 930, 1585, 1733 |
| MunI | CAATTG | 1 cut(s) | 194 |
| MvaI | CCWGG | 3 cut(s) | 855, 930, 1733 |
| MvnI | CGCG | 1 cut(s) | 1450 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 85, 1427, 1616, 1625 |
| NciI | CCSGG | 1 cut(s) | 1585 |
| NdeI | CATATG | 1 cut(s) | 1760 |
| NheI | GCTAGC | 1 cut(s) | 295 |
| NlaIV | GGNNCC | 1 cut(s) | 1737 |
| NmuCI | GTSAC | 2 cut(s) | 690, 1640 |
| NspI | RCATGY | 1 cut(s) | 431 |
| PagI | TCATGA | 1 cut(s) | 1354 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 242 |
| PfeI | GAWTC | 4 cut(s) | 247, 414, 1117, 1647 |
| PfoI | TCCNGGA | 1 cut(s) | 1731 |
| PleI | GAGTC | 1 cut(s) | 812 |
| PpsI | GAGTC | 1 cut(s) | 812 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1568 |
| PsiI | TTATAA | 1 cut(s) | 146 |
| Psp1406I | AACGTT | 1 cut(s) | 1094 |
| Psp6I | CCWGG | 3 cut(s) | 853, 928, 1731 |
| PspEI | GGTNACC | 1 cut(s) | 1640 |
| PspFI | CCCAGC | 1 cut(s) | 717 |
| PspGI | CCWGG | 3 cut(s) | 853, 928, 1731 |
| PspN4I | GGNNCC | 1 cut(s) | 1737 |
| PspPI | GGNCC | 1 cut(s) | 36 |
| PstI | CTGCAG | 2 cut(s) | 1432, 1618 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1613 |
| PsuI | RGATCY | 2 cut(s) | 1318, 1735 |
| PvuII | CAGCTG | 1 cut(s) | 1613 |
| RsaI | GTAC | 3 cut(s) | 323, 824, 1238 |
| RsaNI | GTAC | 3 cut(s) | 322, 823, 1237 |
| RseI | CAYNNNNRTG | 4 cut(s) | 210, 1125, 1670, 1759 |
| SaqAI | TTAA | 5 cut(s) | 606, 623, 998, 1091, 1293 |
| Sau96I | GGNCC | 1 cut(s) | 36 |
| SchI | GAGTC | 1 cut(s) | 813 |
| ScrFI | CCNGG | 4 cut(s) | 855, 930, 1585, 1733 |
| SfaNI | GCATC | 2 cut(s) | 516, 790 |
| SfcI | CTRYAG | 2 cut(s) | 1428, 1614 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 210, 1125, 1670, 1759 |
| SmlI | CTYRAG | 4 cut(s) | 530, 543, 882, 1793 |
| SmoI | CTYRAG | 4 cut(s) | 530, 543, 882, 1793 |
| SpeI | ACTAGT | 1 cut(s) | 1556 |
| SsiI | CCGC | 5 cut(s) | 71, 94, 500, 1176, 1744 |
| SspMI | CTAG | 4 cut(s) | 296, 1410, 1557, 1659 |
| StyD4I | CCNGG | 4 cut(s) | 853, 928, 1583, 1731 |
| TaaI | ACNGT | 9 cut(s) | 292, 599, 822, 831, 976, 1110, 1162, 1196, 1267 |
| TaiI | ACGT | 3 cut(s) | 1097, 1344, 1448 |
| TaqI | TCGA | 4 cut(s) | 56, 774, 1021, 1652 |
| TaqII | GACCGA | 1 cut(s) | 1659 |
| TatI | WGTACW | 2 cut(s) | 321, 1236 |
| TauI | GCSGC | 1 cut(s) | 502 |
| TfiI | GAWTC | 4 cut(s) | 247, 414, 1117, 1647 |
| Tru1I | TTAA | 5 cut(s) | 606, 623, 998, 1091, 1293 |
| Tru9I | TTAA | 5 cut(s) | 606, 623, 998, 1091, 1293 |
| TscAI | CASTG | 7 cut(s) | 118, 265, 699, 825, 865, 987, 1483 |
| TseFI | GTSAC | 2 cut(s) | 690, 1640 |
| Tsp45I | GTSAC | 2 cut(s) | 690, 1640 |
| TspDTI | ATGAA | 4 cut(s) | 393, 1083, 1236, 1747 |
| TspGWI | ACGGA | 1 cut(s) | 672 |
| TspRI | CASTG | 7 cut(s) | 118, 265, 699, 825, 865, 987, 1483 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1457 |
| XapI | RAATTY | 1 cut(s) | 1070 |
| XceI | RCATGY | 1 cut(s) | 431 |
| XmiI | GTMKAC | 2 cut(s) | 287, 1434 |
| XspI | CTAG | 4 cut(s) | 296, 1410, 1557, 1659 |