SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g13280 FvH4_1g13280 |
| malus_domestica | MD02G1147200.v1.1 |
| prunus_persica | Prupe.7G155000_v2.0.a1 |
| rosa_laevigata | RLG00000017084 |
| rosa_multiflora | Rmu_sc0006153.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00141250 |
| rosa_rugosa | Rorug02G0097900 |
| rosa_samantha | Rh2AG147600 Rh2BG152800 Rh2CG153600 Rh2DG153000 |
| rosa_wichuraiana | Rw2G011500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 4 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AclWI | GGATC | 1 cut(s) | 169 |
| AcuI | CTGAAG | 1 cut(s) | 168 |
| AfaI | GTAC | 3 cut(s) | 6, 170, 183 |
| AjnI | CCWGG | 1 cut(s) | 125 |
| AluBI | AGCT | 3 cut(s) | 16, 36, 289 |
| AluI | AGCT | 3 cut(s) | 16, 36, 289 |
| AlwI | GGATC | 1 cut(s) | 169 |
| Asp718I | GGTACC | 1 cut(s) | 4 |
| AsuII | TTCGAA | 1 cut(s) | 69 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 152, 184 |
| BciT130I | CCWGG | 1 cut(s) | 127 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BfaI | CTAG | 1 cut(s) | 179 |
| Bme1390I | CCNGG | 1 cut(s) | 127 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 207 |
| BpmI | CTGGAG | 1 cut(s) | 16 |
| Bpu14I | TTCGAA | 1 cut(s) | 69 |
| BseBI | CCWGG | 1 cut(s) | 127 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| Bsp119I | TTCGAA | 1 cut(s) | 69 |
| Bsp143I | GATC | 2 cut(s) | 91, 174 |
| BspHI | TCATGA | 1 cut(s) | 262 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 169 |
| BspT104I | TTCGAA | 1 cut(s) | 69 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BssMI | GATC | 2 cut(s) | 91, 174 |
| Bst2UI | CCWGG | 1 cut(s) | 127 |
| Bst4CI | ACNGT | 1 cut(s) | 110 |
| Bst6I | CTCTTC | 4 cut(s) | 144, 155, 263, 272 |
| BstBI | TTCGAA | 1 cut(s) | 69 |
| BstKTI | GATC | 2 cut(s) | 94, 177 |
| BstMBI | GATC | 2 cut(s) | 91, 174 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 255 |
| BstNI | CCWGG | 1 cut(s) | 127 |
| BstSCI | CCNGG | 1 cut(s) | 125 |
| BstX2I | RGATCY | 1 cut(s) | 174 |
| BstYI | RGATCY | 1 cut(s) | 174 |
| CciI | TCATGA | 1 cut(s) | 262 |
| Csp6I | GTAC | 3 cut(s) | 5, 169, 182 |
| CviAII | CATG | 2 cut(s) | 104, 263 |
| CviJI | RGCY | 6 cut(s) | 16, 36, 50, 125, 274, 289 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 36, 50, 125, 274, 289 |
| CviQI | GTAC | 3 cut(s) | 5, 169, 182 |
| DpnI | GATC | 2 cut(s) | 93, 176 |
| DpnII | GATC | 2 cut(s) | 91, 174 |
| DraI | TTTAAA | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 4 cut(s) | 144, 155, 263, 272 |
| EarI | CTCTTC | 4 cut(s) | 144, 155, 263, 272 |
| Eco57I | CTGAAG | 1 cut(s) | 168 |
| EcoRII | CCWGG | 1 cut(s) | 125 |
| FaeI | CATG | 2 cut(s) | 107, 266 |
| FaiI | YATR | 4 cut(s) | 90, 105, 264, 292 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 204, 236 |
| FatI | CATG | 2 cut(s) | 103, 262 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| FspBI | CTAG | 1 cut(s) | 179 |
| GsuI | CTGGAG | 1 cut(s) | 16 |
| Hin1II | CATG | 2 cut(s) | 107, 266 |
| HindIII | AAGCTT | 1 cut(s) | 14 |
| HinfI | GANTC | 2 cut(s) | 29, 203 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 2 cut(s) | 95, 263 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 110 |
| HpyCH4V | TGCA | 1 cut(s) | 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 255 |
| Hsp92II | CATG | 2 cut(s) | 107, 266 |
| KpnI | GGTACC | 1 cut(s) | 8 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 2 cut(s) | 91, 174 |
| LmnI | GCTCC | 1 cut(s) | 137 |
| LpnPI | CCDG | 7 cut(s) | 39, 46, 80, 112, 139, 192, 217 |
| LweI | GCATC | 1 cut(s) | 207 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MalI | GATC | 2 cut(s) | 93, 176 |
| MboI | GATC | 2 cut(s) | 91, 174 |
| MboII | GAAGA | 4 cut(s) | 161, 172, 280, 289 |
| MflI | RGATCY | 1 cut(s) | 174 |
| MluCI | AATT | 1 cut(s) | 62 |
| MlyI | GAGTC | 2 cut(s) | 23, 212 |
| MmeI | TCCRAC | 1 cut(s) | 115 |
| MnlI | CCTC | 4 cut(s) | 31, 145, 156, 264 |
| MseI | TTAA | 1 cut(s) | 284 |
| MspR9I | CCNGG | 1 cut(s) | 127 |
| MvaI | CCWGG | 1 cut(s) | 127 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 255 |
| NdeII | GATC | 2 cut(s) | 91, 174 |
| NlaIII | CATG | 2 cut(s) | 107, 266 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmeAIII | GCCGAG | 1 cut(s) | 76 |
| NspV | TTCGAA | 1 cut(s) | 69 |
| PagI | TCATGA | 1 cut(s) | 262 |
| PleI | GAGTC | 2 cut(s) | 23, 211 |
| PpsI | GAGTC | 2 cut(s) | 23, 211 |
| Psp6I | CCWGG | 1 cut(s) | 125 |
| PspGI | CCWGG | 1 cut(s) | 125 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PsuI | RGATCY | 1 cut(s) | 174 |
| RsaI | GTAC | 3 cut(s) | 6, 170, 183 |
| RsaNI | GTAC | 3 cut(s) | 5, 169, 182 |
| SaqAI | TTAA | 1 cut(s) | 284 |
| Sau3AI | GATC | 2 cut(s) | 91, 174 |
| SchI | GAGTC | 2 cut(s) | 23, 212 |
| ScrFI | CCNGG | 1 cut(s) | 127 |
| SetI | ASST | 4 cut(s) | 10, 18, 38, 291 |
| SfaNI | GCATC | 1 cut(s) | 207 |
| SfuI | TTCGAA | 1 cut(s) | 69 |
| Sse9I | AATT | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 179 |
| StyD4I | CCNGG | 1 cut(s) | 125 |
| TaaI | ACNGT | 1 cut(s) | 110 |
| TaqI | TCGA | 3 cut(s) | 38, 69, 201 |
| TasI | AATT | 1 cut(s) | 62 |
| TatI | WGTACW | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 284 |
| Tru9I | TTAA | 1 cut(s) | 284 |
| XspI | CTAG | 1 cut(s) | 179 |