SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g13280 FvH4_1g13280 |
| malus_domestica | MD02G1147200.v1.1 |
| prunus_persica | Prupe.7G155000_v2.0.a1 |
| rosa_laevigata | RLG00000017084 |
| rosa_multiflora | Rmu_sc0006153.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00141250 |
| rosa_rugosa | Rorug02G0097900 |
| rosa_samantha | Rh2AG147600 Rh2BG152800 Rh2CG153600 Rh2DG153000 |
| rosa_wichuraiana | Rw2G011500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 20 |
| AclWI | GGATC | 2 cut(s) | 163, 268 |
| AcuI | CTGAAG | 1 cut(s) | 162 |
| AjnI | CCWGG | 1 cut(s) | 119 |
| AluBI | AGCT | 2 cut(s) | 10, 283 |
| AluI | AGCT | 2 cut(s) | 10, 283 |
| AlwI | GGATC | 2 cut(s) | 163, 268 |
| AspLEI | GCGC | 1 cut(s) | 192 |
| AsuII | TTCGAA | 1 cut(s) | 63 |
| BciT130I | CCWGG | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 1 cut(s) | 121 |
| BmrFI | CCNGG | 1 cut(s) | 121 |
| Bpu14I | TTCGAA | 1 cut(s) | 63 |
| Bse1I | ACTGG | 1 cut(s) | 27 |
| Bse3DI | GCAATG | 1 cut(s) | 259 |
| BseBI | CCWGG | 1 cut(s) | 121 |
| BseMI | GCAATG | 1 cut(s) | 259 |
| BseNI | ACTGG | 1 cut(s) | 27 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| Bsp119I | TTCGAA | 1 cut(s) | 63 |
| Bsp143I | GATC | 3 cut(s) | 100, 168, 273 |
| BspACI | CCGC | 1 cut(s) | 20 |
| BspPI | GGATC | 2 cut(s) | 163, 268 |
| BspT104I | TTCGAA | 1 cut(s) | 63 |
| BsrDI | GCAATG | 1 cut(s) | 259 |
| BsrI | ACTGG | 1 cut(s) | 27 |
| BssMI | GATC | 3 cut(s) | 100, 168, 273 |
| Bst2UI | CCWGG | 1 cut(s) | 121 |
| Bst6I | CTCTTC | 2 cut(s) | 138, 149 |
| BstBI | TTCGAA | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstHHI | GCGC | 1 cut(s) | 192 |
| BstKTI | GATC | 3 cut(s) | 103, 171, 276 |
| BstMBI | GATC | 3 cut(s) | 100, 168, 273 |
| BstNI | CCWGG | 1 cut(s) | 121 |
| BstSCI | CCNGG | 1 cut(s) | 119 |
| BstX2I | RGATCY | 2 cut(s) | 168, 273 |
| BstYI | RGATCY | 2 cut(s) | 168, 273 |
| Cac8I | GCNNGC | 1 cut(s) | 8 |
| CfoI | GCGC | 1 cut(s) | 192 |
| CviJI | RGCY | 5 cut(s) | 10, 44, 119, 268, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 10, 44, 119, 268, 283 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 3 cut(s) | 102, 170, 275 |
| DpnII | GATC | 3 cut(s) | 100, 168, 273 |
| Eam1104I | CTCTTC | 2 cut(s) | 138, 149 |
| EarI | CTCTTC | 2 cut(s) | 138, 149 |
| Eco57I | CTGAAG | 1 cut(s) | 162 |
| EcoRII | CCWGG | 1 cut(s) | 119 |
| FaiI | YATR | 3 cut(s) | 82, 84, 165 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 198, 230 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FauI | CCCGC | 1 cut(s) | 27 |
| FauNDI | CATATG | 1 cut(s) | 82 |
| GlaI | GCGC | 1 cut(s) | 191 |
| HhaI | GCGC | 1 cut(s) | 192 |
| Hin6I | GCGC | 1 cut(s) | 190 |
| HinP1I | GCGC | 1 cut(s) | 190 |
| HindIII | AAGCTT | 1 cut(s) | 8 |
| HinfI | GANTC | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 2 cut(s) | 181, 228 |
| HpyAV | CCTTC | 2 cut(s) | 182, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HspAI | GCGC | 1 cut(s) | 190 |
| Kzo9I | GATC | 3 cut(s) | 100, 168, 273 |
| LpnPI | CCDG | 6 cut(s) | 40, 59, 106, 111, 133, 186 |
| MaeIII | GTNAC | 1 cut(s) | 242 |
| MalI | GATC | 3 cut(s) | 102, 170, 275 |
| MboI | GATC | 3 cut(s) | 100, 168, 273 |
| MboII | GAAGA | 5 cut(s) | 6, 155, 166, 269, 283 |
| MflI | RGATCY | 2 cut(s) | 168, 273 |
| MluCI | AATT | 1 cut(s) | 56 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MmeI | TCCRAC | 2 cut(s) | 109, 214 |
| MnlI | CCTC | 5 cut(s) | 82, 125, 139, 150, 258 |
| MspR9I | CCNGG | 1 cut(s) | 121 |
| MvaI | CCWGG | 1 cut(s) | 121 |
| NdeI | CATATG | 1 cut(s) | 82 |
| NdeII | GATC | 3 cut(s) | 100, 168, 273 |
| NspV | TTCGAA | 1 cut(s) | 63 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 119 |
| PsuI | RGATCY | 2 cut(s) | 168, 273 |
| Sau3AI | GATC | 3 cut(s) | 100, 168, 273 |
| SchI | GAGTC | 1 cut(s) | 206 |
| ScrFI | CCNGG | 1 cut(s) | 121 |
| SetI | ASST | 2 cut(s) | 12, 285 |
| SfuI | TTCGAA | 1 cut(s) | 63 |
| Sse9I | AATT | 1 cut(s) | 56 |
| SsiI | CCGC | 1 cut(s) | 20 |
| StyD4I | CCNGG | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 63 |
| TasI | AATT | 1 cut(s) | 56 |
| TspDTI | ATGAA | 1 cut(s) | 270 |