Rh4CG294900
MYB Family

Myb-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
55406048 .. 55406206
159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG294900.1

Sequence Viewer

Length: 159 bp
ATGAGTAACCTGAACAAATTGGACTTTGCTCCATTGGGAACAACTGGCTCTGAATATCACAGGTGGGTTCGTGATATCCGCCAGCATCTCAAGGCCGATGGAATCTTGGATACGATTCTCGAGACTAGCCAGGACGTGCTAACTGTTGAGCAAGCTTAA

Protein Analysis

52

Amino Acids

5.9

Weight (kDa)

5.0

Isoelectric Point (pI)

50.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0025621)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0008167.1_g000002 Rmu_sc0025301.1_g000001
rosa_samantha Rh4CG294900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 79
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 1 cut(s) 129
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 116
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 1 cut(s) 93
AvaI CYCGRG 1 cut(s) 119
BccI CCATC 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 131
BciVI GTATCC 1 cut(s) 103
BcoDI GTCTC 1 cut(s) 116
BfaI CTAG 1 cut(s) 126
BfuI GTATCC 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 131
BmeT110I CYCGRG 1 cut(s) 119
BmgBI CACGTC 1 cut(s) 136
BmrFI CCNGG 1 cut(s) 131
BmsI GCATC 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 74
Bse1I ACTGG 1 cut(s) 49
BseBI CCWGG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 49
BshFI GGCC 1 cut(s) 95
BsiHKCI CYCGRG 1 cut(s) 119
BsmAI GTCTC 1 cut(s) 116
BsnI GGCC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 119
BspACI CCGC 1 cut(s) 79
BspANI GGCC 1 cut(s) 95
BsrI ACTGG 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 131
Bst4CI ACNGT 1 cut(s) 145
BstC8I GCNNGC 2 cut(s) 83, 153
BstMAI GTCTC 1 cut(s) 116
BstNI CCWGG 1 cut(s) 131
BstSCI CCNGG 1 cut(s) 129
BsuI GTATCC 1 cut(s) 103
BsuRI GGCC 1 cut(s) 95
BtrI CACGTC 1 cut(s) 136
Cac8I GCNNGC 2 cut(s) 83, 153
CviJI RGCY 4 cut(s) 48, 95, 129, 155
CviKI_1 RGCY 4 cut(s) 48, 95, 129, 155
EciI GGCGGA 1 cut(s) 68
Eco32I GATATC 1 cut(s) 76
Eco88I CYCGRG 1 cut(s) 119
EcoRII CCWGG 1 cut(s) 129
EcoRV GATATC 1 cut(s) 76
FspBI CTAG 1 cut(s) 126
HaeIII GGCC 1 cut(s) 95
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 2 cut(s) 102, 115
Hpy188I TCNGA 1 cut(s) 52
Hpy188III TCNNGA 3 cut(s) 71, 119, 121
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 135
HpySE526I ACGT 1 cut(s) 135
LmnI GCTCC 1 cut(s) 34
LpnPI CCDG 6 cut(s) 23, 30, 46, 95, 116, 143
LweI GCATC 1 cut(s) 94
MaeI CTAG 1 cut(s) 126
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 1 cut(s) 5
MluCI AATT 1 cut(s) 17
MseI TTAA 1 cut(s) 157
MspR9I CCNGG 1 cut(s) 131
MvaI CCWGG 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 119
PfeI GAWTC 2 cut(s) 102, 115
Psp6I CCWGG 1 cut(s) 129
PspGI CCWGG 1 cut(s) 129
SaqAI TTAA 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 131
SetI ASST 4 cut(s) 12, 65, 138, 157
SfaNI GCATC 1 cut(s) 94
Sfr274I CTCGAG 1 cut(s) 119
SlaI CTCGAG 1 cut(s) 119
SmlI CTYRAG 2 cut(s) 89, 119
SmoI CTYRAG 2 cut(s) 89, 119
Sse9I AATT 1 cut(s) 17
SsiI CCGC 1 cut(s) 79
SspMI CTAG 1 cut(s) 126
StyD4I CCNGG 1 cut(s) 129
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 138
TaqI TCGA 1 cut(s) 120
TasI AATT 1 cut(s) 17
TfiI GAWTC 2 cut(s) 102, 115
Tru1I TTAA 1 cut(s) 157
Tru9I TTAA 1 cut(s) 157
XhoI CTCGAG 1 cut(s) 119
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.