SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00232010 |
| rosa_samantha | Rh7DG391400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 367 |
| Acc36I | ACCTGC | 1 cut(s) | 367 |
| AcsI | RAATTY | 1 cut(s) | 25 |
| AgsI | TTSAA | 1 cut(s) | 41 |
| AluBI | AGCT | 2 cut(s) | 187, 245 |
| AluI | AGCT | 2 cut(s) | 187, 245 |
| Alw21I | GWGCWC | 1 cut(s) | 189 |
| Alw26I | GTCTC | 1 cut(s) | 303 |
| Ama87I | CYCGRG | 1 cut(s) | 105 |
| AoxI | GGCC | 2 cut(s) | 77, 419 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| AseI | ATTAAT | 1 cut(s) | 174 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 28 |
| AspS9I | GGNCC | 1 cut(s) | 77 |
| AsuHPI | GGTGA | 1 cut(s) | 394 |
| AvaI | CYCGRG | 1 cut(s) | 105 |
| BanII | GRGCYC | 1 cut(s) | 189 |
| Bbv12I | GWGCWC | 1 cut(s) | 189 |
| BccI | CCATC | 3 cut(s) | 191, 272, 403 |
| BcoDI | GTCTC | 1 cut(s) | 303 |
| BfmI | CTRYAG | 1 cut(s) | 240 |
| BfuAI | ACCTGC | 1 cut(s) | 367 |
| BmeT110I | CYCGRG | 1 cut(s) | 105 |
| BmgT120I | GGNCC | 1 cut(s) | 77 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 1 cut(s) | 222 |
| BseGI | GGATG | 3 cut(s) | 16, 154, 283 |
| BsgI | GTGCAG | 1 cut(s) | 412 |
| BshFI | GGCC | 2 cut(s) | 79, 421 |
| BsiHKAI | GWGCWC | 1 cut(s) | 189 |
| BsiHKCI | CYCGRG | 1 cut(s) | 105 |
| BsiSI | CCGG | 1 cut(s) | 422 |
| BsmAI | GTCTC | 1 cut(s) | 303 |
| BsmBI | CGTCTC | 1 cut(s) | 303 |
| BsnI | GGCC | 2 cut(s) | 79, 421 |
| BsoBI | CYCGRG | 1 cut(s) | 105 |
| Bsp1286I | GDGCHC | 1 cut(s) | 189 |
| Bsp19I | CCATGG | 1 cut(s) | 222 |
| BspANI | GGCC | 2 cut(s) | 79, 421 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspMI | ACCTGC | 1 cut(s) | 367 |
| BssECI | CCNNGG | 1 cut(s) | 222 |
| BssT1I | CCWWGG | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 3 cut(s) | 125, 251, 358 |
| BstDSI | CCRYGG | 1 cut(s) | 222 |
| BstF5I | GGATG | 3 cut(s) | 16, 154, 283 |
| BstMAI | GTCTC | 1 cut(s) | 303 |
| BstSFI | CTRYAG | 1 cut(s) | 240 |
| BsuRI | GGCC | 2 cut(s) | 79, 421 |
| BtgI | CCRYGG | 1 cut(s) | 222 |
| BtsCI | GGATG | 3 cut(s) | 16, 154, 283 |
| BveI | ACCTGC | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 1 cut(s) | 77 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 79, 114 |
| CviAII | CATG | 2 cut(s) | 154, 223 |
| CviJI | RGCY | 5 cut(s) | 79, 110, 187, 245, 421 |
| CviKI_1 | RGCY | 5 cut(s) | 79, 110, 187, 245, 421 |
| Eam1104I | CTCTTC | 3 cut(s) | 125, 251, 358 |
| EarI | CTCTTC | 3 cut(s) | 125, 251, 358 |
| Ecl136II | GAGCTC | 1 cut(s) | 187 |
| Eco130I | CCWWGG | 1 cut(s) | 222 |
| Eco24I | GRGCYC | 1 cut(s) | 189 |
| Eco53kI | GAGCTC | 1 cut(s) | 187 |
| Eco88I | CYCGRG | 1 cut(s) | 105 |
| EcoICRI | GAGCTC | 1 cut(s) | 187 |
| EcoT14I | CCWWGG | 1 cut(s) | 222 |
| EcoT38I | GRGCYC | 1 cut(s) | 189 |
| ErhI | CCWWGG | 1 cut(s) | 222 |
| Esp3I | CGTCTC | 1 cut(s) | 303 |
| FaeI | CATG | 2 cut(s) | 157, 226 |
| FaiI | YATR | 5 cut(s) | 87, 155, 170, 224, 306 |
| FatI | CATG | 2 cut(s) | 153, 222 |
| FokI | GGATG | 3 cut(s) | 23, 161, 290 |
| FriOI | GRGCYC | 1 cut(s) | 189 |
| HaeIII | GGCC | 2 cut(s) | 79, 421 |
| HapII | CCGG | 1 cut(s) | 422 |
| Hin1II | CATG | 2 cut(s) | 157, 226 |
| HincII | GTYRAC | 1 cut(s) | 235 |
| HindII | GTYRAC | 1 cut(s) | 235 |
| HinfI | GANTC | 1 cut(s) | 236 |
| HpaII | CCGG | 1 cut(s) | 422 |
| HphI | GGTGA | 1 cut(s) | 394 |
| Hpy166II | GTNNAC | 1 cut(s) | 235 |
| Hpy188I | TCNGA | 1 cut(s) | 211 |
| Hpy8I | GTNNAC | 1 cut(s) | 235 |
| HpyCH4IV | ACGT | 1 cut(s) | 312 |
| HpyCH4V | TGCA | 2 cut(s) | 317, 393 |
| HpySE526I | ACGT | 1 cut(s) | 312 |
| Hsp92II | CATG | 2 cut(s) | 157, 226 |
| LpnPI | CCDG | 1 cut(s) | 362 |
| MaeII | ACGT | 1 cut(s) | 312 |
| MboII | GAAGA | 6 cut(s) | 16, 21, 142, 268, 366, 375 |
| MhlI | GDGCHC | 1 cut(s) | 189 |
| MluCI | AATT | 2 cut(s) | 25, 385 |
| MlyI | GAGTC | 1 cut(s) | 230 |
| MnlI | CCTC | 6 cut(s) | 67, 126, 136, 220, 359, 411 |
| MroXI | GAANNNNTTC | 1 cut(s) | 28 |
| MseI | TTAA | 2 cut(s) | 158, 174 |
| MspI | CCGG | 1 cut(s) | 422 |
| NcoI | CCATGG | 1 cut(s) | 222 |
| NlaIII | CATG | 2 cut(s) | 157, 226 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| PaeR7I | CTCGAG | 1 cut(s) | 105 |
| PaqCI | CACCTGC | 1 cut(s) | 367 |
| PdmI | GAANNNNTTC | 1 cut(s) | 28 |
| PleI | GAGTC | 1 cut(s) | 230 |
| PpsI | GAGTC | 1 cut(s) | 230 |
| PshBI | ATTAAT | 1 cut(s) | 174 |
| Psp124BI | GAGCTC | 1 cut(s) | 189 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PspPI | GGNCC | 1 cut(s) | 77 |
| PspXI | VCTCGAGB | 1 cut(s) | 105 |
| SacI | GAGCTC | 1 cut(s) | 189 |
| SaqAI | TTAA | 2 cut(s) | 158, 174 |
| Sau96I | GGNCC | 1 cut(s) | 77 |
| SchI | GAGTC | 1 cut(s) | 230 |
| SduI | GDGCHC | 1 cut(s) | 189 |
| SetI | ASST | 5 cut(s) | 69, 189, 247, 315, 381 |
| SfcI | CTRYAG | 1 cut(s) | 240 |
| Sfr274I | CTCGAG | 1 cut(s) | 105 |
| SgeI | CNNG | 9 cut(s) | 29, 117, 119, 166, 235, 286, 340, 389, 416 |
| SlaI | CTCGAG | 1 cut(s) | 105 |
| SmlI | CTYRAG | 1 cut(s) | 105 |
| SmoI | CTYRAG | 1 cut(s) | 105 |
| Sse9I | AATT | 2 cut(s) | 25, 385 |
| SstI | GAGCTC | 1 cut(s) | 189 |
| StyI | CCWWGG | 1 cut(s) | 222 |
| TaiI | ACGT | 1 cut(s) | 315 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TasI | AATT | 2 cut(s) | 25, 385 |
| Tru1I | TTAA | 2 cut(s) | 158, 174 |
| Tru9I | TTAA | 2 cut(s) | 158, 174 |
| TspDTI | ATGAA | 3 cut(s) | 17, 27, 338 |
| VspI | ATTAAT | 1 cut(s) | 174 |
| XapI | RAATTY | 1 cut(s) | 25 |
| XhoI | CTCGAG | 1 cut(s) | 105 |
| XmnI | GAANNNNTTC | 1 cut(s) | 28 |