RLG00000031648
MYB Family

Myb-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
7031836 .. 7032458
623 bp
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UTR
Exon/CDS
Intron
RLM00000031648

Sequence Viewer

Length: 375 bp
ATGGTAGTGCAGGTGGTCTCTGATTGCAAAGCAACTACCAGGAAGAACCGAAGAACATATAATGATGTGAAGAACTACTGGAATACCAAGCTGAAAAAGAAGCTTTCCAAGATAGGAATTGACCCTCTAACCCACAAACCCATCTCCCAGGTCGATGATGAACAGCTTCATCTTCCCACAAAATCCAGATTAAGGAAAACACTCACCCCAGAACCAAAACAACACAATTTCACAAGAACCAGATCCGTTGTCTCTGGAATAGGTCCACCACAGCAACCCAGAAGCCCGTCAAAGCCACTGTCGTCCCCACCACCTCCAGTACCATCCACAACATTGTCCACCATGCCGTCGATATCCCAGCTTGCCACAACCTAA

Protein Analysis

125

Amino Acids

13.86

Weight (kDa)

10.56

Isoelectric Point (pI)

60.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0030977)

Species Orthologous Gene IDs
rosa_laevigata RLG00000031648 RLG00000034952

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 237
AfaI GTAC 1 cut(s) 321
AfiI CCNNNNNNNGG 1 cut(s) 192
AjnI CCWGG 2 cut(s) 38, 147
AluBI AGCT 4 cut(s) 91, 103, 166, 361
AluI AGCT 4 cut(s) 91, 103, 166, 361
Alw26I GTCTC 2 cut(s) 22, 256
AlwI GGATC 1 cut(s) 237
ArsI GACNNNNNNTTYG 2 cut(s) 284, 316
Asp700I GAANNNNTTC 1 cut(s) 165
AspS9I GGNCC 1 cut(s) 263
AsuHPI GGTGA 1 cut(s) 196
AvaII GGWCC 1 cut(s) 263
BccI CCATC 2 cut(s) 149, 331
BceAI ACGGC 1 cut(s) 331
BciT130I CCWGG 2 cut(s) 40, 149
BcoDI GTCTC 2 cut(s) 22, 256
Bme1390I CCNGG 2 cut(s) 40, 149
Bme18I GGWCC 1 cut(s) 263
BmgT120I GGNCC 1 cut(s) 263
BmrFI CCNGG 2 cut(s) 40, 149
BpmI CTGGAG 1 cut(s) 300
BsaI GGTCTC 1 cut(s) 22
BsaJI CCNNGG 1 cut(s) 147
Bsc4I CCNNNNNNNGG 1 cut(s) 192
Bse1I ACTGG 2 cut(s) 83, 317
BseBI CCWGG 2 cut(s) 40, 149
BseDI CCNNGG 1 cut(s) 147
BseGI GGATG 1 cut(s) 323
BseLI CCNNNNNNNGG 1 cut(s) 192
BseNI ACTGG 2 cut(s) 83, 317
BseYI CCCAGC 1 cut(s) 357
BsgI GTGCAG 1 cut(s) 29
BslFI GGGAC 1 cut(s) 289
BslI CCNNNNNNNGG 1 cut(s) 192
BsmAI GTCTC 2 cut(s) 22, 256
BsmFI GGGAC 1 cut(s) 289
Bso31I GGTCTC 1 cut(s) 22
Bsp143I GATC 1 cut(s) 242
BspPI GGATC 1 cut(s) 237
BspTNI GGTCTC 1 cut(s) 22
BsrI ACTGG 2 cut(s) 83, 317
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 1 cut(s) 242
Bst2UI CCWGG 2 cut(s) 40, 149
Bst4CI ACNGT 1 cut(s) 300
BstC8I GCNNGC 1 cut(s) 363
BstF5I GGATG 1 cut(s) 323
BstKTI GATC 1 cut(s) 245
BstMAI GTCTC 2 cut(s) 22, 256
BstMBI GATC 1 cut(s) 242
BstNI CCWGG 2 cut(s) 40, 149
BstSCI CCNGG 2 cut(s) 38, 147
BstX2I RGATCY 1 cut(s) 242
BstYI RGATCY 1 cut(s) 242
BtsCI GGATG 1 cut(s) 323
BtsIMutI CAGTG 1 cut(s) 296
Cac8I GCNNGC 1 cut(s) 363
Cfr13I GGNCC 1 cut(s) 263
Csp6I GTAC 1 cut(s) 320
CviAII CATG 1 cut(s) 343
CviJI RGCY 6 cut(s) 91, 103, 166, 285, 295, 361
CviKI_1 RGCY 6 cut(s) 91, 103, 166, 285, 295, 361
CviQI GTAC 1 cut(s) 320
DpnI GATC 1 cut(s) 244
DpnII GATC 1 cut(s) 242
Eco31I GGTCTC 1 cut(s) 22
Eco32I GATATC 1 cut(s) 354
Eco47I GGWCC 1 cut(s) 263
EcoRII CCWGG 2 cut(s) 38, 147
EcoRV GATATC 1 cut(s) 354
FaeI CATG 1 cut(s) 346
FaiI YATR 3 cut(s) 58, 60, 344
FaqI GGGAC 1 cut(s) 289
FatI CATG 1 cut(s) 342
FokI GGATG 1 cut(s) 310
GsaI CCCAGC 1 cut(s) 361
GsuI CTGGAG 1 cut(s) 300
Hin1II CATG 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 101
HphI GGTGA 1 cut(s) 196
Hpy166II GTNNAC 2 cut(s) 266, 339
Hpy188I TCNGA 1 cut(s) 22
Hpy188III TCNNGA 2 cut(s) 186, 255
Hpy8I GTNNAC 2 cut(s) 266, 339
Hpy99I CGWCG 1 cut(s) 352
HpyCH4III ACNGT 1 cut(s) 300
HpyCH4V TGCA 2 cut(s) 10, 27
Hsp92II CATG 1 cut(s) 346
Kzo9I GATC 1 cut(s) 242
MalI GATC 1 cut(s) 244
MboI GATC 1 cut(s) 242
MboII GAAGA 4 cut(s) 55, 63, 82, 164
MflI RGATCY 1 cut(s) 242
MluCI AATT 2 cut(s) 117, 226
MnlI CCTC 2 cut(s) 135, 324
MroXI GAANNNNTTC 1 cut(s) 165
MseI TTAA 1 cut(s) 191
MspR9I CCNGG 2 cut(s) 40, 149
MvaI CCWGG 2 cut(s) 40, 149
NdeII GATC 1 cut(s) 242
NlaIII CATG 1 cut(s) 346
PdmI GAANNNNTTC 1 cut(s) 165
Psp6I CCWGG 2 cut(s) 38, 147
PspFI CCCAGC 1 cut(s) 357
PspGI CCWGG 2 cut(s) 38, 147
PspPI GGNCC 1 cut(s) 263
PsuI RGATCY 1 cut(s) 242
RsaI GTAC 1 cut(s) 321
RsaNI GTAC 1 cut(s) 320
SaqAI TTAA 1 cut(s) 191
Sau3AI GATC 1 cut(s) 242
Sau96I GGNCC 1 cut(s) 263
ScrFI CCNGG 2 cut(s) 40, 149
SetI ASST 9 cut(s) 15, 93, 105, 153, 168, 265, 316, 363, 374
SinI GGWCC 1 cut(s) 263
Sse9I AATT 2 cut(s) 117, 226
StyD4I CCNGG 2 cut(s) 38, 147
TaaI ACNGT 1 cut(s) 300
TaqI TCGA 2 cut(s) 153, 350
TasI AATT 2 cut(s) 117, 226
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TscAI CASTG 1 cut(s) 303
TspDTI ATGAA 2 cut(s) 158, 174
TspGWI ACGGA 1 cut(s) 235
TspRI CASTG 1 cut(s) 303
VpaK11BI GGWCC 1 cut(s) 263
XmnI GAANNNNTTC 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.