Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000006931 |
| rosa_samantha | Rh3BG072500 Rh3CG070700 Rh3DG073200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 453 |
| Acc36I | ACCTGC | 1 cut(s) | 453 |
| AccII | CGCG | 1 cut(s) | 427 |
| AcsI | RAATTY | 1 cut(s) | 438 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 172, 373 |
| AgsI | TTSAA | 1 cut(s) | 74 |
| AluBI | AGCT | 4 cut(s) | 79, 141, 235, 335 |
| AluI | AGCT | 4 cut(s) | 79, 141, 235, 335 |
| Alw21I | GWGCWC | 1 cut(s) | 314 |
| AoxI | GGCC | 1 cut(s) | 381 |
| ApoI | RAATTY | 1 cut(s) | 438 |
| AspS9I | GGNCC | 1 cut(s) | 7 |
| AsuC2I | CCSGG | 1 cut(s) | 276 |
| AsuHPI | GGTGA | 1 cut(s) | 388 |
| AvaII | GGWCC | 1 cut(s) | 7 |
| BauI | CACGAG | 1 cut(s) | 313 |
| BbsI | GAAGAC | 1 cut(s) | 274 |
| Bbv12I | GWGCWC | 1 cut(s) | 314 |
| BbvCI | CCTCAGC | 1 cut(s) | 149 |
| BccI | CCATC | 2 cut(s) | 87, 392 |
| BclI | TGATCA | 1 cut(s) | 196 |
| BcnI | CCSGG | 1 cut(s) | 276 |
| BfaI | CTAG | 1 cut(s) | 354 |
| BfmI | CTRYAG | 2 cut(s) | 114, 142 |
| BfuAI | ACCTGC | 1 cut(s) | 453 |
| Bme1390I | CCNGG | 1 cut(s) | 276 |
| Bme18I | GGWCC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 1 cut(s) | 7 |
| BmiI | GGNNCC | 1 cut(s) | 98 |
| BmrFI | CCNGG | 1 cut(s) | 276 |
| BmsI | GCATC | 1 cut(s) | 119 |
| BpiI | GAAGAC | 1 cut(s) | 274 |
| BpmI | CTGGAG | 1 cut(s) | 357 |
| Bpu10I | CCTNAGC | 2 cut(s) | 149, 221 |
| BpuMI | CCSGG | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 1 cut(s) | 275 |
| BsaWI | WCCGGW | 1 cut(s) | 172 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 172, 373 |
| BseDI | CCNNGG | 1 cut(s) | 275 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 172, 373 |
| BseMII | CTCAG | 1 cut(s) | 140 |
| BseRI | GAGGAG | 1 cut(s) | 201 |
| Bsh1236I | CGCG | 1 cut(s) | 427 |
| BshFI | GGCC | 1 cut(s) | 383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 314 |
| BsiSI | CCGG | 3 cut(s) | 173, 264, 275 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 172, 373 |
| BsnI | GGCC | 1 cut(s) | 383 |
| Bsp1286I | GDGCHC | 1 cut(s) | 314 |
| Bsp143I | GATC | 3 cut(s) | 110, 196, 211 |
| BspANI | GGCC | 1 cut(s) | 383 |
| BspCNI | CTCAG | 1 cut(s) | 141 |
| BspFNI | CGCG | 1 cut(s) | 427 |
| BspLI | GGNNCC | 1 cut(s) | 98 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspMI | ACCTGC | 1 cut(s) | 453 |
| BspQI | GCTCTTC | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 275 |
| BssMI | GATC | 3 cut(s) | 110, 196, 211 |
| BssSI | CACGAG | 1 cut(s) | 313 |
| Bst2BI | CACGAG | 1 cut(s) | 313 |
| Bst4CI | ACNGT | 2 cut(s) | 376, 422 |
| Bst6I | CTCTTC | 1 cut(s) | 131 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 113 |
| BstC8I | GCNNGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 3 cut(s) | 59, 149, 221 |
| BstFNI | CGCG | 1 cut(s) | 427 |
| BstKTI | GATC | 3 cut(s) | 113, 199, 214 |
| BstMBI | GATC | 3 cut(s) | 110, 196, 211 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 113, 138, 154, 232 |
| BstSCI | CCNGG | 1 cut(s) | 274 |
| BstSFI | CTRYAG | 2 cut(s) | 114, 142 |
| BstUI | CGCG | 1 cut(s) | 427 |
| BstV2I | GAAGAC | 1 cut(s) | 274 |
| BsuRI | GGCC | 1 cut(s) | 383 |
| BtsI | GCAGTG | 1 cut(s) | 71 |
| BtsIMutI | CAGTG | 1 cut(s) | 71 |
| BveI | ACCTGC | 1 cut(s) | 453 |
| Cac8I | GCNNGC | 1 cut(s) | 118 |
| Cfr13I | GGNCC | 1 cut(s) | 7 |
| CviAII | CATG | 2 cut(s) | 33, 217 |
| DdeI | CTNAG | 3 cut(s) | 59, 149, 221 |
| DpnI | GATC | 3 cut(s) | 112, 198, 213 |
| DpnII | GATC | 3 cut(s) | 110, 196, 211 |
| Eam1104I | CTCTTC | 1 cut(s) | 131 |
| EarI | CTCTTC | 1 cut(s) | 131 |
| Eco47I | GGWCC | 1 cut(s) | 7 |
| EcoRI | GAATTC | 1 cut(s) | 438 |
| FaeI | CATG | 2 cut(s) | 36, 220 |
| FaiI | YATR | 5 cut(s) | 34, 179, 218, 360, 389 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 39, 71 |
| FatI | CATG | 2 cut(s) | 32, 216 |
| FbaI | TGATCA | 1 cut(s) | 196 |
| FspBI | CTAG | 1 cut(s) | 354 |
| GsuI | CTGGAG | 1 cut(s) | 357 |
| HaeIII | GGCC | 1 cut(s) | 383 |
| HapII | CCGG | 3 cut(s) | 173, 264, 275 |
| Hin1II | CATG | 2 cut(s) | 36, 220 |
| HindIII | AAGCTT | 1 cut(s) | 233 |
| HpaII | CCGG | 3 cut(s) | 173, 264, 275 |
| HphI | GGTGA | 1 cut(s) | 388 |
| Hpy188I | TCNGA | 3 cut(s) | 83, 418, 448 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| HpyAV | CCTTC | 2 cut(s) | 80, 373 |
| HpyCH4III | ACNGT | 2 cut(s) | 376, 422 |
| HpyCH4V | TGCA | 5 cut(s) | 32, 69, 107, 116, 132 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 113, 138, 154, 232 |
| HpyF3I | CTNAG | 3 cut(s) | 59, 149, 221 |
| Hsp92II | CATG | 2 cut(s) | 36, 220 |
| Ksp22I | TGATCA | 1 cut(s) | 196 |
| Kzo9I | GATC | 3 cut(s) | 110, 196, 211 |
| LguI | GCTCTTC | 1 cut(s) | 131 |
| LmnI | GCTCC | 1 cut(s) | 309 |
| LweI | GCATC | 1 cut(s) | 119 |
| MaeI | CTAG | 1 cut(s) | 354 |
| MalI | GATC | 3 cut(s) | 112, 198, 213 |
| MboI | GATC | 3 cut(s) | 110, 196, 211 |
| MboII | GAAGA | 8 cut(s) | 47, 56, 59, 102, 148, 279, 310, 420 |
| MhlI | GDGCHC | 1 cut(s) | 314 |
| MluCI | AATT | 3 cut(s) | 160, 207, 438 |
| MmeI | TCCRAC | 1 cut(s) | 426 |
| MnlI | CCTC | 4 cut(s) | 144, 179, 273, 309 |
| MseI | TTAA | 1 cut(s) | 122 |
| MspI | CCGG | 3 cut(s) | 173, 264, 275 |
| MspR9I | CCNGG | 1 cut(s) | 276 |
| MvnI | CGCG | 1 cut(s) | 427 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 113, 138, 154, 232 |
| NciI | CCSGG | 1 cut(s) | 276 |
| NdeII | GATC | 3 cut(s) | 110, 196, 211 |
| NlaIII | CATG | 2 cut(s) | 36, 220 |
| NlaIV | GGNNCC | 1 cut(s) | 98 |
| PaqCI | CACCTGC | 1 cut(s) | 453 |
| PciSI | GCTCTTC | 1 cut(s) | 131 |
| PspN4I | GGNNCC | 1 cut(s) | 98 |
| PspPI | GGNCC | 1 cut(s) | 7 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| SapI | GCTCTTC | 1 cut(s) | 131 |
| SaqAI | TTAA | 1 cut(s) | 122 |
| Sau3AI | GATC | 3 cut(s) | 110, 196, 211 |
| Sau96I | GGNCC | 1 cut(s) | 7 |
| ScrFI | CCNGG | 1 cut(s) | 276 |
| SduI | GDGCHC | 1 cut(s) | 314 |
| SfaNI | GCATC | 1 cut(s) | 119 |
| SfcI | CTRYAG | 2 cut(s) | 114, 142 |
| SinI | GGWCC | 1 cut(s) | 7 |
| Sse9I | AATT | 3 cut(s) | 160, 207, 438 |
| SspMI | CTAG | 1 cut(s) | 354 |
| StyD4I | CCNGG | 1 cut(s) | 274 |
| TaaI | ACNGT | 2 cut(s) | 376, 422 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 160, 207, 438 |
| Tru1I | TTAA | 1 cut(s) | 122 |
| Tru9I | TTAA | 1 cut(s) | 122 |
| TscAI | CASTG | 1 cut(s) | 71 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 337 |
| TspRI | CASTG | 1 cut(s) | 71 |
| VpaK11BI | GGWCC | 1 cut(s) | 7 |
| XapI | RAATTY | 1 cut(s) | 438 |
| XspI | CTAG | 1 cut(s) | 354 |