RchiOBHm_Chr6g0265461
MYB Family

cell division cycle 5-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
21333197 .. 21334246
1050 bp
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UTR
Exon/CDS
Intron
PRQ23807

Sequence Viewer

Length: 156 bp
ATGAGGTACGGCAAGAACCAGTGGGCTCGAATCTCCTCCCTTCTTGTTAGCAAATCCGCCAAGCAGTGGAAGGCTCGCTGCTACCAGTGGCTCGATCCCTCCATCAAAAAGCTAATTGGGATGGGCGGTGCTTGTGGAGACTTGGGGTTTGACTGA

Protein Analysis

51

Amino Acids

5.76

Weight (kDa)

9.83

Isoelectric Point (pI)

22.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030313)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0265461
rosa_multiflora Rmu_sc0002574.1_g000003

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 66
AciI CCGC 2 cut(s) 57, 126
AclWI GGATC 1 cut(s) 89
AfaI GTAC 1 cut(s) 8
AfiI CCNNNNNNNGG 1 cut(s) 66
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
Alw26I GTCTC 1 cut(s) 132
AlwI GGATC 1 cut(s) 89
ApeKI GCWGC 1 cut(s) 78
ArsI GACNNNNNNTTYG 1 cut(s) 131
BanII GRGCYC 1 cut(s) 28
BbvI GCAGC 1 cut(s) 65
BccI CCATC 2 cut(s) 110, 115
BceAI ACGGC 1 cut(s) 25
BcoDI GTCTC 1 cut(s) 132
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
Bsc4I CCNNNNNNNGG 1 cut(s) 66
Bse1I ACTGG 2 cut(s) 19, 85
BseGI GGATG 1 cut(s) 126
BseLI CCNNNNNNNGG 1 cut(s) 66
BseNI ACTGG 2 cut(s) 19, 85
BseRI GAGGAG 1 cut(s) 25
BseXI GCAGC 1 cut(s) 65
BslI CCNNNNNNNGG 1 cut(s) 66
BsmAI GTCTC 1 cut(s) 132
Bsp1286I GDGCHC 1 cut(s) 28
Bsp143I GATC 1 cut(s) 94
BspACI CCGC 2 cut(s) 57, 126
BspPI GGATC 1 cut(s) 89
BsrI ACTGG 2 cut(s) 19, 85
BssMI GATC 1 cut(s) 94
BstC8I GCNNGC 1 cut(s) 76
BstF5I GGATG 1 cut(s) 126
BstKTI GATC 1 cut(s) 97
BstMAI GTCTC 1 cut(s) 132
BstMBI GATC 1 cut(s) 94
BstV1I GCAGC 1 cut(s) 65
BtsCI GGATG 1 cut(s) 126
BtsI GCAGTG 1 cut(s) 71
BtsIMutI CAGTG 3 cut(s) 26, 71, 92
Cac8I GCNNGC 1 cut(s) 76
Csp6I GTAC 1 cut(s) 7
CviJI RGCY 4 cut(s) 26, 74, 91, 112
CviKI_1 RGCY 4 cut(s) 26, 74, 91, 112
CviQI GTAC 1 cut(s) 7
DpnI GATC 1 cut(s) 96
DpnII GATC 1 cut(s) 94
EciI GGCGGA 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 28
EcoT38I GRGCYC 1 cut(s) 28
Fnu4HI GCNGC 1 cut(s) 79
FokI GGATG 1 cut(s) 133
FriOI GRGCYC 1 cut(s) 28
Fsp4HI GCNGC 1 cut(s) 79
GluI GCNGC 1 cut(s) 79
HinfI GANTC 1 cut(s) 30
HpyAV CCTTC 2 cut(s) 50, 64
Kzo9I GATC 1 cut(s) 94
LpnPI CCDG 2 cut(s) 32, 98
Lsp1109I GCAGC 1 cut(s) 65
MalI GATC 1 cut(s) 96
MboI GATC 1 cut(s) 94
MhlI GDGCHC 1 cut(s) 28
MluCI AATT 1 cut(s) 114
MnlI CCTC 2 cut(s) 46, 109
NdeII GATC 1 cut(s) 94
PfeI GAWTC 1 cut(s) 30
PflMI CCANNNNNTGG 1 cut(s) 66
PkrI GCNGC 1 cut(s) 80
RsaI GTAC 1 cut(s) 8
RsaNI GTAC 1 cut(s) 7
SatI GCNGC 1 cut(s) 79
Sau3AI GATC 1 cut(s) 94
SduI GDGCHC 1 cut(s) 28
SetI ASST 2 cut(s) 8, 114
SgeI CNNG 9 cut(s) 25, 31, 39, 56, 73, 87, 97, 104, 144
Sse9I AATT 1 cut(s) 114
SsiI CCGC 2 cut(s) 57, 126
TaqI TCGA 2 cut(s) 28, 93
TasI AATT 1 cut(s) 114
TfiI GAWTC 1 cut(s) 30
TscAI CASTG 3 cut(s) 26, 71, 92
TseI GCWGC 1 cut(s) 78
TspRI CASTG 3 cut(s) 26, 71, 92
Van91I CCANNNNNTGG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.