Rh7AG224000
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
21030998 .. 21031318
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG224000.1

Sequence Viewer

Length: 321 bp
ATGGGTTATGAGCCTGTGCCTATTCATCGAACCTACATCGTTATATTCCATAACCTTCAATCCAATAAGAGAGATGTAGATCCTGTTGAAGACTTGGCTTCATCAATTATGCTGTTTGGAGAAGGGTTTGTGAGGATGGAGAAAATGAAGATGGAAATGACAATGGAGATTGAGAAGATGCGAATAGAGATGGAGCTGAAGCGTAATGAGATCATGATCGAATTGCACCAGCAGATTGTGGATGCTTTTGTGAATGCATTATTGGAAAGGAATCGAAGAAGAAAATTAAAGAAGGCGAAAGTAGAGTCTTCCAATGCTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

12.6

Weight (kDa)

8.03

Isoelectric Point (pI)

72.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0031288)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003964.1_g000012
rosa_samantha Rh7AG224000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 74
AcuI CTGAAG 1 cut(s) 218
AgsI TTSAA 2 cut(s) 59, 89
AjuI GAANNNNNNNTTGG 2 cut(s) 245, 277
AluBI AGCT 1 cut(s) 196
AluI AGCT 1 cut(s) 196
AlwI GGATC 1 cut(s) 74
ArsI GACNNNNNNTTYG 1 cut(s) 290
BbsI GAAGAC 2 cut(s) 96, 300
BccI CCATC 3 cut(s) 130, 145, 184
BmsI GCATC 2 cut(s) 168, 232
BpiI GAAGAC 2 cut(s) 96, 300
BsaBI GATNNNNATC 2 cut(s) 78, 215
Bse8I GATNNNNATC 2 cut(s) 78, 215
BseGI GGATG 2 cut(s) 141, 247
BseJI GATNNNNATC 2 cut(s) 78, 215
BsmI GAATGC 1 cut(s) 259
Bsp143I GATC 3 cut(s) 79, 210, 216
BspHI TCATGA 1 cut(s) 213
BspPI GGATC 1 cut(s) 74
BssMI GATC 3 cut(s) 79, 210, 216
BstDEI CTNAG 1 cut(s) 318
BstF5I GGATG 2 cut(s) 141, 247
BstKTI GATC 3 cut(s) 82, 213, 219
BstMBI GATC 3 cut(s) 79, 210, 216
BstV2I GAAGAC 2 cut(s) 96, 300
BstX2I RGATCY 1 cut(s) 79
BstYI RGATCY 1 cut(s) 79
BtsCI GGATG 2 cut(s) 141, 247
CciI TCATGA 1 cut(s) 213
CviAII CATG 1 cut(s) 214
CviJI RGCY 3 cut(s) 13, 98, 196
CviKI_1 RGCY 3 cut(s) 13, 98, 196
DdeI CTNAG 1 cut(s) 318
DpnI GATC 3 cut(s) 81, 212, 218
DpnII GATC 3 cut(s) 79, 210, 216
Eco57I CTGAAG 1 cut(s) 218
EcoT22I ATGCAT 1 cut(s) 259
FaeI CATG 1 cut(s) 217
FaiI YATR 5 cut(s) 9, 44, 51, 110, 215
FatI CATG 1 cut(s) 213
FokI GGATG 2 cut(s) 148, 254
Hin1II CATG 1 cut(s) 217
HinfI GANTC 2 cut(s) 271, 305
Hpy188III TCNNGA 1 cut(s) 214
HpyAV CCTTC 3 cut(s) 65, 116, 286
HpyCH4V TGCA 2 cut(s) 226, 257
HpyF3I CTNAG 1 cut(s) 318
Hsp92II CATG 1 cut(s) 217
Kzo9I GATC 3 cut(s) 79, 210, 216
LmnI GCTCC 1 cut(s) 193
LpnPI CCDG 3 cut(s) 27, 96, 242
LweI GCATC 2 cut(s) 168, 232
MalI GATC 3 cut(s) 81, 212, 218
MboI GATC 3 cut(s) 79, 210, 216
MboII GAAGA 6 cut(s) 101, 160, 187, 288, 291, 300
MflI RGATCY 1 cut(s) 79
MluCI AATT 3 cut(s) 105, 221, 284
MlyI GAGTC 1 cut(s) 314
MnlI CCTC 1 cut(s) 126
Mph1103I ATGCAT 1 cut(s) 259
MseI TTAA 1 cut(s) 287
Mva1269I GAATGC 1 cut(s) 259
NdeII GATC 3 cut(s) 79, 210, 216
NlaIII CATG 1 cut(s) 217
NsiI ATGCAT 1 cut(s) 259
PagI TCATGA 1 cut(s) 213
PctI GAATGC 1 cut(s) 259
PfeI GAWTC 1 cut(s) 271
PleI GAGTC 1 cut(s) 313
PpsI GAGTC 1 cut(s) 313
PsuI RGATCY 1 cut(s) 79
SaqAI TTAA 1 cut(s) 287
Sau3AI GATC 3 cut(s) 79, 210, 216
SchI GAGTC 1 cut(s) 314
SetI ASST 3 cut(s) 35, 57, 198
SfaNI GCATC 2 cut(s) 168, 232
SgeI CNNG 5 cut(s) 26, 95, 106, 226, 241
Sse9I AATT 3 cut(s) 105, 221, 284
TaqI TCGA 3 cut(s) 28, 219, 274
TasI AATT 3 cut(s) 105, 221, 284
TfiI GAWTC 1 cut(s) 271
Tru1I TTAA 1 cut(s) 287
Tru9I TTAA 1 cut(s) 287
TspDTI ATGAA 3 cut(s) 14, 90, 161
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.