Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006872

Physical Location & Seq

Genomic Coordinates Forward (+)

19345725 .. 19352129

Gene Structure 6405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG127900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGGAAGAAAAACGCGGAGACGCCGGAACTCAGCCTCCGGCTAATGCCGCCGACTCTCCGGCCGCCGAGCCTACTTCTTCGAGACGCCGCGCCGGAGGCCAAAAGCGAAAGGCCAGCAGCCTCGGCGGCTCCGGCTCTTCATCAACACCGTCGAAACGCTTGACTCGCGAGAAGGCTTCGCTTTCTCACCCTCCGATCCACAACGGCCCGTTGACGAGGGCCCGCCAGGGGCCCAATAACCATGCGTCGGCCTCAGCCGCGGCCGTGAAGCCAGCTGCTCAGACGAAGCGGCCGGAGCAGTCGTCGGTGGAGGCGGAGCGGGCTAAAAGGGAGAGCGAGTTGGAGGCTTTGGAGGCTTCTATGGAAGCTGAGTTTGAAGCCATTAGATCTCGCGATGCCAATGCTCATGTGGTTCCCAGTCATTGTGGTTGGTTTTCATGGACAAAGATTCACGCCATTGAGGAGCGTATGTTGCCGTCTTTCTTTAATGGGAAGTCTGATGCTCGAACTCCCGATACATACCTGGAGATACGCAATTGTATTATGAAAAAATTCCATGCGAATCCGGGAACATTGGTTGATCTGAAGGATATGTTGGAGCTTGAAGTGGGAGACTTCGATTCAAGACAAGAATTAATGGAATTTTTGGACCACTGGGGTTTGATAAATTTCCACCCTTTCCCACCAACAGGTTCTACTGTTGCAAATGTCAACAGTGATGAGGTGACAGAAAGGGATTCTTTGGTAGATAAGTTGTATCACTTTGAAGCACTAGAATCACGATCATCAGTGGTTCCTAAGACTAACTTATTTACTCCAACTGTGCCATCTGGTCTGTTCCCAGAGTCTACATTTGCTGATGAATTGGTGAGGCCTGAGGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAACGCTACCATTGCCAGAAGCAGGCAGATTTTGATCTGTGCTCTGATTGCTTTAACAACGGGAAATTCGACTCGGGTATGTCTTCATCAGATTTTATTCTTATGGAGCCTGCTGAGGCTCCTGGGGTAAGTGGTGGGAAGTGGACAGATCAGGAGACCCTCCTTCTCCTTGAAGCATTAGAATTATATAAAGAAAACTGGAATGAGATTGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGTATATTGCACTTTGTTCAAATGCCAATTGAGGATACCTTCCTAGATCGTGATGATGATATTGATGCCAGTGCCAAAGAAACTGCAGATCCAACTTCAACTAACAATGATTTATTGCCCCCCAAAGATGCCCCCGAAACAACAGAGAATAAGACAAGTGCTAATGAGAGTGACCCTCAAACTTCCCCGATGGAAATTTCAAAAGAAGAAGCAAGTGACGTTAAAGTTGGGGAGGATACTTCAAGGCCAGAAGATGAAAATGAAGTCAAAGTTGGTCAGGACACCTCGAAGTTGGAAGATATTGGTGATTTGAAAATTGATCAGGAAACAGATGAGAACCTTGCATTGAAGGCTCTTAAAGAAGCCTTTGAAGTTGTTGGTTATCCTCAAACACCTGAAAGTCAACTCTCATTTGCAGATGTGGGAAACCCTGCCATGGCATTGGCAGCATTCCTGGCACAGTTGGTGGGACCTGATCATGCCATTGCCTCGGCACATAATTCTTTGAAATCCATATCTGCAGATTCTCCTGGCATTGAGCTGGCTTCGAGGCACTGCTTTATTTTGGAAGATCCACCAAATGACAGAAAGGAACAAGCTAGTCATGATAGTGTTGCTGCTGAAAGGGAAGTGCAGAGTGAGAAAGTCGATGAAGAAAATTGTCATAAAGAGGATAACTCCACCTCAGGTTTGGAAGATAGAGGTGTATCAAATGATAACAACGACAAGAAACTTGAAGAAGTTACTCCTGAAGAAAAGTCACAATCTACAAAAGAACAAGATGACAGGGTTTCTCATGAGGAAGTAGGAACTGATAAATTGAACAAGTCAAACAACTCAGAGTTACCAAATGACCAACCACCAACTTGGGGGAAGTCAGATAATTCAAAAGTTGAGACACCACCAAGTTCAGTAAAGGAGTCGGGAGAGAGAACTTCAGTAGGACAGCCTTCTGAAACAGTAGAGACACCAATGGATGTGGATATGTCTGACTCCAATCCCTCAACGAAGACGGAGCCTCAGCAACCAGTTACATCAAATTCAGCTGAGGAACCTTCTCAGTCTACAGAGGCATCAAAAGAAGTGGATGTATCTAATGCTCTGCCTTCAGAAAGAGATGAGCCTCCACCACCAGTTACTGAAGAACCCCCTCAACCTACAGAAACATCAAAGGATGTTCTTATGGTGTGTGACTCTCAGCCCCCACAAGAGAATGAGCCTTCCCAACCAGTTGAAAACACTGCGAGTATATATATCTCTCTCTGTCTCTCTCTCTCTCTATATATATACATATCTATATATATATATATATATATATCTGTGTGTGTGTGTGTGTGTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

838

Amino Acids

91.8

Weight (kDa)

4.57

Isoelectric Point (pI)

51.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	146 - 224	9.3e-21	SWIRM domain
ZZ	PF00569	298 - 333	9.4e-09	Zinc finger, ZZ type
Myb_DNA-binding	PF00249	356 - 398	3.6e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	358 - 398	1e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34430 AT4G34430 AT4G34430 AT4G34430
fragaria_vesca	FvH4_2g08620 FvH4_2g08620
malus_domestica	MD05G1067900.v1.1 MD10G1077800.v1.1
prunus_persica	Prupe.8G098500_v2.0.a1
pyrus_communis	pycom05g05880 pycom10g06070
rosa_chinensis	RchiOBHm_Chr6g0263951
rosa_laevigata	RLG00000014300
rosa_multiflora	Rmu_co8374983.1_g000001 Rmu_sc0002112.1_g000023 Rmu_sc0034069.1_g000004
rosa_roxburghii	Rroxscaffold_176G00431340 Rroxscaffold_7G00203710
rosa_rugosa	Rorug06G0007000 Rorug06G0007000 Rorug06G0007000
rosa_samantha	Rh6AG127900 Rh6BG123700 Rh6CG122400 Rh6DG109600
rosa_wichuraiana	Rw6G011040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	319
AccI	GTMKAC	2 cut(s)	848, 2237
AccII	CGCG	5 cut(s)	15, 90, 168, 260, 393
AclWI	GGATC	3 cut(s)	190, 1256, 1739
AcoI	YGGCCR	3 cut(s)	60, 261, 290
AcsI	RAATTY	6 cut(s)	551, 641, 667, 995, 1368, 2212
AcuI	CTGAAG	5 cut(s)	605, 1944, 2094, 2265, 2334
AcyI	GRCGYC	2 cut(s)	21, 85
AfaI	GTAC	1 cut(s)	896
AfiI	CCNNNNNNNGG	6 cut(s)	228, 247, 689, 952, 1609, 2042
AflIII	ACRYGT	1 cut(s)	1147
AjnI	CCWGG	5 cut(s)	225, 522, 1051, 1626, 1702
AjuI	GAANNNNNNNTTGG	4 cut(s)	578, 610, 1428, 1460
AloI	GAACNNNNNNTCC	2 cut(s)	19, 51
AluBI	AGCT	9 cut(s)	275, 368, 601, 887, 917, 1169, 1714, 1772, 2219
AluI	AGCT	9 cut(s)	275, 368, 601, 887, 917, 1169, 1714, 1772, 2219
Alw21I	GWGCWC	1 cut(s)	974
Alw26I	GTCTC	7 cut(s)	12, 76, 606, 1079, 2063, 2132, 2444
AlwI	GGATC	3 cut(s)	190, 1256, 1739
AlwNI	CAGNNNCTG	1 cut(s)	2312
Ama87I	CYCGRG	1 cut(s)	1003
ApaI	GGGCCC	2 cut(s)	223, 234
ApeKI	GCWGC	4 cut(s)	117, 275, 1619, 1790
ApoI	RAATTY	6 cut(s)	551, 641, 667, 995, 1368, 2212
AseI	ATTAAT	1 cut(s)	635
Asp700I	GAANNNNTTC	1 cut(s)	551
AspLEI	GCGC	1 cut(s)	92
AspS9I	GGNCC	8 cut(s)	206, 219, 220, 230, 231, 649, 881, 1643
AsuC2I	CCSGG	1 cut(s)	567
AsuHPI	GGTGA	4 cut(s)	179, 736, 880, 1490
AvaI	CYCGRG	1 cut(s)	1003
AvaII	GGWCC	2 cut(s)	649, 1643
AxyI	CCTNAGG	2 cut(s)	876, 1858
BaeGI	GKGCMC	2 cut(s)	223, 234
BanII	GRGCYC	2 cut(s)	223, 234
BbsI	GAAGAC	2 cut(s)	1005, 2189
Bbv12I	GWGCWC	1 cut(s)	974
BbvCI	CCTCAGC	4 cut(s)	253, 1044, 2193, 2220
BbvI	GCAGC	4 cut(s)	129, 262, 1631, 1777
BccI	CCATC	2 cut(s)	835, 1357
BceAI	ACGGC	3 cut(s)	220, 248, 460
BcgI	CGANNNNNNTGC	2 cut(s)	383, 417
BciT130I	CCWGG	5 cut(s)	227, 524, 1053, 1628, 1704
BciVI	GTATCC	2 cut(s)	1201, 1402
BclI	TGATCA	2 cut(s)	1492, 1648
BcnI	CCSGG	1 cut(s)	567
BcoDI	GTCTC	7 cut(s)	12, 76, 606, 1079, 2063, 2132, 2444
BfaI	CTAG	3 cut(s)	773, 1217, 1773
BfmI	CTRYAG	4 cut(s)	1257, 1692, 2238, 2331
BfuI	GTATCC	2 cut(s)	1201, 1402
BglI	GCCNNNNNGGC	2 cut(s)	126, 880
BglII	AGATCT	1 cut(s)	386
Bme1390I	CCNGG	6 cut(s)	227, 524, 567, 1053, 1628, 1704
Bme18I	GGWCC	2 cut(s)	649, 1643
BmeT110I	CYCGRG	1 cut(s)	1003
BmgT120I	GGNCC	8 cut(s)	206, 219, 220, 230, 231, 649, 881, 1643
BmrFI	CCNGG	6 cut(s)	227, 524, 567, 1053, 1628, 1704
BmrI	ACTGGG	2 cut(s)	411, 664
BmsI	GCATC	5 cut(s)	385, 490, 1228, 1291, 2255
BmuI	ACTGGG	2 cut(s)	411, 664
BpiI	GAAGAC	2 cut(s)	1005, 2189
BplI	GAGNNNNNCTC	4 cut(s)	1333, 1365, 1835, 1867
BpmI	CTGGAG	1 cut(s)	545
Bpu10I	CCTNAGC	4 cut(s)	253, 1044, 2193, 2220
BpuMI	CCSGG	1 cut(s)	567
BsaBI	GATNNNNATC	1 cut(s)	963
BsaHI	GRCGYC	2 cut(s)	21, 85
BsaI	GGTCTC	1 cut(s)	1079
BsaJI	CCNNGG	6 cut(s)	121, 226, 258, 1052, 1608, 1662
BsaXI	ACNNNNNCTCC	8 cut(s)	19, 49, 287, 317, 323, 353, 455, 485
Bsc4I	CCNNNNNNNGG	6 cut(s)	228, 247, 689, 952, 1609, 2042
Bse1I	ACTGG	7 cut(s)	417, 659, 1133, 1242, 2201, 2306, 2402
Bse21I	CCTNAGG	2 cut(s)	876, 1858
Bse3DI	GCAATG	3 cut(s)	898, 940, 1656
Bse8I	GATNNNNATC	1 cut(s)	963
BseBI	CCWGG	5 cut(s)	227, 524, 1053, 1628, 1704
BseDI	CCNNGG	6 cut(s)	121, 226, 258, 1052, 1608, 1662
BseGI	GGATG	3 cut(s)	2155, 2266, 2353
BseJI	GATNNNNATC	1 cut(s)	963
BseLI	CCNNNNNNNGG	6 cut(s)	228, 247, 689, 952, 1609, 2042
BseMI	GCAATG	3 cut(s)	898, 940, 1656
BseNI	ACTGG	7 cut(s)	417, 659, 1133, 1242, 2201, 2306, 2402
BseRI	GAGGAG	1 cut(s)	476
BseSI	GKGCMC	2 cut(s)	223, 234
BseX3I	CGGCCG	3 cut(s)	60, 261, 290
BseXI	GCAGC	4 cut(s)	129, 262, 1631, 1777
BsgI	GTGCAG	1 cut(s)	1826
Bsh1236I	CGCG	5 cut(s)	15, 90, 168, 260, 393
Bsh1285I	CGRYCG	3 cut(s)	63, 264, 293
BsiEI	CGRYCG	3 cut(s)	63, 264, 293
BsiHKAI	GWGCWC	1 cut(s)	974
BsiHKCI	CYCGRG	1 cut(s)	1003
BsiSI	CCGG	7 cut(s)	24, 38, 59, 93, 132, 293, 566
BslFI	GGGAC	1 cut(s)	1656
BslI	CCNNNNNNNGG	6 cut(s)	228, 247, 689, 952, 1609, 2042
BsmAI	GTCTC	7 cut(s)	12, 76, 606, 1079, 2063, 2132, 2444
BsmBI	CGTCTC	2 cut(s)	12, 76
BsmFI	GGGAC	1 cut(s)	1656
BsmI	GAATGC	1 cut(s)	1622
Bso31I	GGTCTC	1 cut(s)	1079
BsoBI	CYCGRG	1 cut(s)	1003
Bsp120I	GGGCCC	2 cut(s)	219, 230
Bsp1286I	GDGCHC	3 cut(s)	223, 234, 974
Bsp19I	CCATGG	1 cut(s)	1608
Bsp68I	TCGCGA	2 cut(s)	168, 393
BspFNI	CGCG	5 cut(s)	15, 90, 168, 260, 393
BspHI	TCATGA	2 cut(s)	1777, 1969
BspMAI	CTGCAG	2 cut(s)	1261, 1696
BspPI	GGATC	3 cut(s)	190, 1256, 1739
BspQI	GCTCTTC	1 cut(s)	142
BspTNI	GGTCTC	1 cut(s)	1079
BsrBI	CCGCTC	1 cut(s)	319
BsrDI	GCAATG	3 cut(s)	898, 940, 1656
BsrI	ACTGG	7 cut(s)	417, 659, 1133, 1242, 2201, 2306, 2402
BssECI	CCNNGG	6 cut(s)	121, 226, 258, 1052, 1608, 1662
BssNI	GRCGYC	2 cut(s)	21, 85
BssT1I	CCWWGG	1 cut(s)	1608
Bst2UI	CCWGG	5 cut(s)	227, 524, 1053, 1628, 1704
Bst4CI	ACNGT	6 cut(s)	150, 700, 716, 823, 1635, 2134
Bst6I	CTCTTC	1 cut(s)	142
BstACI	GRCGYC	2 cut(s)	21, 85
BstC8I	GCNNGC	8 cut(s)	115, 223, 273, 321, 885, 954, 1041, 1716
BstDSI	CCRYGG	2 cut(s)	258, 1608
BstF5I	GGATG	3 cut(s)	2155, 2266, 2353
BstFNI	CGCG	5 cut(s)	15, 90, 168, 260, 393
BstHHI	GCGC	1 cut(s)	92
BstMAI	GTCTC	7 cut(s)	12, 76, 606, 1079, 2063, 2132, 2444
BstMCI	CGRYCG	3 cut(s)	63, 264, 293
BstNI	CCWGG	5 cut(s)	227, 524, 1053, 1628, 1704
BstNSI	RCATGY	1 cut(s)	1151
BstSCI	CCNGG	6 cut(s)	225, 522, 565, 1051, 1626, 1702
BstSFI	CTRYAG	4 cut(s)	1257, 1692, 2238, 2331
BstSLI	GKGCMC	2 cut(s)	223, 234
BstUI	CGCG	5 cut(s)	15, 90, 168, 260, 393
BstV1I	GCAGC	4 cut(s)	129, 262, 1631, 1777
BstV2I	GAAGAC	2 cut(s)	1005, 2189
BstX2I	RGATCY	3 cut(s)	386, 1261, 1744
BstXI	CCANNNNNNTGG	2 cut(s)	1615, 2040
BstYI	RGATCY	3 cut(s)	386, 1261, 1744
BstZI	CGGCCG	3 cut(s)	60, 261, 290
Bsu36I	CCTNAGG	2 cut(s)	876, 1858
BsuI	GTATCC	2 cut(s)	1201, 1402
BtgI	CCRYGG	2 cut(s)	258, 1608
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	3 cut(s)	2155, 2266, 2353
BtsI	GCAGTG	2 cut(s)	1726, 2412
BtsIMutI	CAGTG	7 cut(s)	652, 721, 795, 1178, 1249, 1726, 2412
BtuMI	TCGCGA	2 cut(s)	168, 393
Cac8I	GCNNGC	8 cut(s)	115, 223, 273, 321, 885, 954, 1041, 1716
CaiI	CAGNNNCTG	1 cut(s)	2312
CciI	TCATGA	2 cut(s)	1777, 1969
CfoI	GCGC	1 cut(s)	92
Cfr13I	GGNCC	8 cut(s)	206, 219, 220, 230, 231, 649, 881, 1643
Cfr42I	CCGCGG	1 cut(s)	261
CseI	GACGC	3 cut(s)	29, 93, 234
Csp6I	GTAC	1 cut(s)	895
CspCI	CAANNNNNGTGG	4 cut(s)	2133, 2168, 2238, 2273
CviAII	CATG	9 cut(s)	242, 407, 438, 557, 1148, 1609, 1652, 1778, 1970
CviQI	GTAC	1 cut(s)	895
EaeI	YGGCCR	3 cut(s)	60, 261, 290
EagI	CGGCCG	3 cut(s)	60, 261, 290
Eam1104I	CTCTTC	1 cut(s)	142
EarI	CTCTTC	1 cut(s)	142
EciI	GGCGGA	1 cut(s)	329
EclXI	CGGCCG	3 cut(s)	60, 261, 290
Eco130I	CCWWGG	1 cut(s)	1608
Eco147I	AGGCCT	1 cut(s)	874
Eco24I	GRGCYC	2 cut(s)	223, 234
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	2 cut(s)	649, 1643
Eco52I	CGGCCG	3 cut(s)	60, 261, 290
Eco57I	CTGAAG	5 cut(s)	605, 1944, 2094, 2265, 2334
Eco81I	CCTNAGG	2 cut(s)	876, 1858
Eco88I	CYCGRG	1 cut(s)	1003
EcoO109I	RGGNCCY	3 cut(s)	219, 230, 1643
EcoRII	CCWGG	5 cut(s)	225, 522, 1051, 1626, 1702
EcoT14I	CCWWGG	1 cut(s)	1608
EcoT38I	GRGCYC	2 cut(s)	223, 234
ErhI	CCWWGG	1 cut(s)	1608
Esp3I	CGTCTC	2 cut(s)	12, 76
FaeI	CATG	9 cut(s)	245, 410, 441, 560, 1151, 1612, 1655, 1781, 1973
FalI	AAGNNNNNCTT	4 cut(s)	724, 756, 791, 823
FaqI	GGGAC	1 cut(s)	1656
FatI	CATG	9 cut(s)	241, 406, 437, 556, 1147, 1608, 1651, 1777, 1969
FauI	CCCGC	2 cut(s)	230, 312
FbaI	TGATCA	2 cut(s)	1492, 1648
FblI	GTMKAC	2 cut(s)	848, 2237
FokI	GGATG	3 cut(s)	2162, 2273, 2360
FriOI	GRGCYC	2 cut(s)	223, 234
FspBI	CTAG	3 cut(s)	773, 1217, 1773
GlaI	GCGC	1 cut(s)	91
GsuI	CTGGAG	1 cut(s)	545
HapII	CCGG	7 cut(s)	24, 38, 59, 93, 132, 293, 566
HgaI	GACGC	3 cut(s)	29, 93, 234
HhaI	GCGC	1 cut(s)	92
Hin1I	GRCGYC	2 cut(s)	21, 85
Hin1II	CATG	9 cut(s)	245, 410, 441, 560, 1151, 1612, 1655, 1781, 1973
Hin6I	GCGC	1 cut(s)	90
HinP1I	GCGC	1 cut(s)	90
HincII	GTYRAC	3 cut(s)	213, 712, 1577
HindII	GTYRAC	3 cut(s)	213, 712, 1577
HpaII	CCGG	7 cut(s)	24, 38, 59, 93, 132, 293, 566
HphI	GGTGA	4 cut(s)	179, 736, 880, 1490
Hpy166II	GTNNAC	6 cut(s)	213, 712, 849, 1074, 1577, 2238
Hpy8I	GTNNAC	6 cut(s)	213, 712, 849, 1074, 1577, 2238
Hpy99I	CGWCG	3 cut(s)	154, 250, 307
HpyAV	CCTTC	9 cut(s)	166, 580, 1103, 1222, 1516, 2133, 2238, 2289, 2403
HpyCH4III	ACNGT	6 cut(s)	150, 700, 716, 823, 1635, 2134
HpyCH4IV	ACGT	1 cut(s)	1392
HpyCH4V	TGCA	8 cut(s)	704, 903, 1183, 1259, 1517, 1589, 1694, 1807
HpySE526I	ACGT	1 cut(s)	1392
Hsp92I	GRCGYC	2 cut(s)	21, 85
Hsp92II	CATG	9 cut(s)	245, 410, 441, 560, 1151, 1612, 1655, 1781, 1973
HspAI	GCGC	1 cut(s)	90
Ksp22I	TGATCA	2 cut(s)	1492, 1648
KspI	CCGCGG	1 cut(s)	261
LguI	GCTCTTC	1 cut(s)	142
LmnI	GCTCC	8 cut(s)	134, 295, 316, 463, 598, 1036, 1054, 2188
Lsp1109I	GCAGC	4 cut(s)	129, 262, 1631, 1777
LweI	GCATC	5 cut(s)	385, 490, 1228, 1291, 2255
MaeI	CTAG	3 cut(s)	773, 1217, 1773
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	9 cut(s)	724, 1343, 1388, 1915, 1932, 2016, 2203, 2308, 2363
MbiI	CCGCTC	1 cut(s)	319
MfeI	CAATTG	2 cut(s)	535, 1200
MflI	RGATCY	3 cut(s)	386, 1261, 1744
MhlI	GDGCHC	3 cut(s)	223, 234, 974
MlyI	GAGTC	7 cut(s)	47, 157, 854, 995, 2102, 2159, 2360
MmeI	TCCRAC	5 cut(s)	321, 576, 842, 1289, 1446
MroXI	GAANNNNTTC	1 cut(s)	551
MseI	TTAA	5 cut(s)	486, 635, 984, 1395, 1530
MslI	CAYNNNNRTG	1 cut(s)	1782
MspA1I	CMGCKG	5 cut(s)	260, 275, 887, 917, 2219
MspI	CCGG	7 cut(s)	24, 38, 59, 93, 132, 293, 566
MspR9I	CCNGG	6 cut(s)	227, 524, 567, 1053, 1628, 1704
MunI	CAATTG	2 cut(s)	535, 1200
Mva1269I	GAATGC	1 cut(s)	1622
MvaI	CCWGG	5 cut(s)	227, 524, 1053, 1628, 1704
MvnI	CGCG	5 cut(s)	15, 90, 168, 260, 393
NciI	CCSGG	1 cut(s)	567
NcoI	CCATGG	1 cut(s)	1608
NlaIII	CATG	9 cut(s)	245, 410, 441, 560, 1151, 1612, 1655, 1781, 1973
NmeAIII	GCCGAG	3 cut(s)	91, 102, 1643
NmuCI	GTSAC	5 cut(s)	724, 1343, 1388, 1932, 2363
NruI	TCGCGA	2 cut(s)	168, 393
NspI	RCATGY	1 cut(s)	1151
PagI	TCATGA	2 cut(s)	1777, 1969
PceI	AGGCCT	1 cut(s)	874
PciI	ACATGT	1 cut(s)	1147
PciSI	GCTCTTC	1 cut(s)	142
PcsI	WCGNNNNNNNCGW	1 cut(s)	996
PctI	GAATGC	1 cut(s)	1622
PdmI	GAANNNNTTC	1 cut(s)	551
PfeI	GAWTC	6 cut(s)	448, 562, 620, 737, 776, 1697
PfoI	TCCNGGA	1 cut(s)	565
PleI	GAGTC	7 cut(s)	47, 157, 853, 995, 2101, 2159, 2360
PpsI	GAGTC	7 cut(s)	47, 157, 853, 995, 2101, 2159, 2360
PpuMI	RGGWCCY	1 cut(s)	1643
PscI	ACATGT	1 cut(s)	1147
PshBI	ATTAAT	1 cut(s)	635
Psp5II	RGGWCCY	1 cut(s)	1643
Psp6I	CCWGG	5 cut(s)	225, 522, 1051, 1626, 1702
PspGI	CCWGG	5 cut(s)	225, 522, 1051, 1626, 1702
PspOMI	GGGCCC	2 cut(s)	219, 230
PspPI	GGNCC	8 cut(s)	206, 219, 220, 230, 231, 649, 881, 1643
PspPPI	RGGWCCY	1 cut(s)	1643
PsrI	GAACNNNNNNTAC	2 cut(s)	499, 531
PstI	CTGCAG	2 cut(s)	1261, 1696
PstNI	CAGNNNCTG	1 cut(s)	2312
PsuI	RGATCY	3 cut(s)	386, 1261, 1744
PvuII	CAGCTG	4 cut(s)	275, 887, 917, 2219
RruI	TCGCGA	2 cut(s)	168, 393
RsaI	GTAC	1 cut(s)	896
RsaNI	GTAC	1 cut(s)	895
RseI	CAYNNNNRTG	1 cut(s)	1782
SacII	CCGCGG	1 cut(s)	261
SapI	GCTCTTC	1 cut(s)	142
SaqAI	TTAA	5 cut(s)	486, 635, 984, 1395, 1530
Sau96I	GGNCC	8 cut(s)	206, 219, 220, 230, 231, 649, 881, 1643
SchI	GAGTC	7 cut(s)	47, 157, 854, 995, 2102, 2159, 2360
ScrFI	CCNGG	6 cut(s)	227, 524, 567, 1053, 1628, 1704
SduI	GDGCHC	3 cut(s)	223, 234, 974
SfaNI	GCATC	5 cut(s)	385, 490, 1228, 1291, 2255
SfcI	CTRYAG	4 cut(s)	1257, 1692, 2238, 2331
SfiI	GGCCNNNNNGGCC	1 cut(s)	880
Sfr303I	CCGCGG	1 cut(s)	261
SgrBI	CCGCGG	1 cut(s)	261
SinI	GGWCC	2 cut(s)	649, 1643
SmiMI	CAYNNNNRTG	1 cut(s)	1782
SseBI	AGGCCT	1 cut(s)	874
SspMI	CTAG	3 cut(s)	773, 1217, 1773
StuI	AGGCCT	1 cut(s)	874
StyD4I	CCNGG	6 cut(s)	225, 522, 565, 1051, 1626, 1702
StyI	CCWWGG	1 cut(s)	1608
TaaI	ACNGT	6 cut(s)	150, 700, 716, 823, 1635, 2134
TaiI	ACGT	1 cut(s)	1395
TaqI	TCGA	8 cut(s)	80, 152, 505, 618, 999, 1460, 1721, 1821
TauI	GCSGC	7 cut(s)	50, 65, 90, 129, 260, 263, 292
TfiI	GAWTC	6 cut(s)	448, 562, 620, 737, 776, 1697
Tru1I	TTAA	5 cut(s)	486, 635, 984, 1395, 1530
Tru9I	TTAA	5 cut(s)	486, 635, 984, 1395, 1530
TscAI	CASTG	7 cut(s)	659, 721, 795, 1178, 1249, 1733, 2419
TseFI	GTSAC	5 cut(s)	724, 1343, 1388, 1932, 2363
TseI	GCWGC	4 cut(s)	117, 275, 1619, 1790
Tsp45I	GTSAC	5 cut(s)	724, 1343, 1388, 1932, 2363
TspDTI	ATGAA	8 cut(s)	129, 426, 560, 876, 1005, 1443, 1449, 1839
TspGWI	ACGGA	1 cut(s)	2201
TspRI	CASTG	7 cut(s)	659, 721, 795, 1178, 1249, 1733, 2419
VpaK11BI	GGWCC	2 cut(s)	649, 1643
VspI	ATTAAT	1 cut(s)	635
XapI	RAATTY	6 cut(s)	551, 641, 667, 995, 1368, 2212
XceI	RCATGY	1 cut(s)	1151
XcmI	CCANNNNNNNNNTGG	2 cut(s)	406, 1861
XmiI	GTMKAC	2 cut(s)	848, 2237
XmnI	GAANNNNTTC	1 cut(s)	551
XspI	CTAG	3 cut(s)	773, 1217, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.