Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_samantha | Rh5BG275300 Rh5DG283500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 152 |
| AclI | AACGTT | 1 cut(s) | 32 |
| AcsI | RAATTY | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 18 |
| AgsI | TTSAA | 6 cut(s) | 205, 253, 351, 384, 556, 598 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 503 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 553, 585 |
| AluBI | AGCT | 8 cut(s) | 93, 111, 159, 193, 267, 310, 376, 493 |
| AluI | AGCT | 8 cut(s) | 93, 111, 159, 193, 267, 310, 376, 493 |
| Alw26I | GTCTC | 1 cut(s) | 490 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| ApoI | RAATTY | 1 cut(s) | 301 |
| AsuHPI | GGTGA | 3 cut(s) | 267, 412, 580 |
| BanI | GGYRCC | 1 cut(s) | 152 |
| BbvI | GCAGC | 1 cut(s) | 229 |
| BccI | CCATC | 2 cut(s) | 457, 568 |
| BcoDI | GTCTC | 1 cut(s) | 490 |
| BfmI | CTRYAG | 1 cut(s) | 194 |
| BisI | GCNGC | 1 cut(s) | 243 |
| BlsI | GCNGC | 1 cut(s) | 244 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 503 |
| BmiI | GGNNCC | 2 cut(s) | 10, 154 |
| BmrI | ACTGGG | 2 cut(s) | 60, 241 |
| BmsI | GCATC | 3 cut(s) | 155, 401, 424 |
| BmuI | ACTGGG | 2 cut(s) | 60, 241 |
| BpuEI | CTTGAG | 2 cut(s) | 348, 381 |
| BsaJI | CCNNGG | 1 cut(s) | 604 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 360, 390, 466, 496 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 18 |
| Bse118I | RCCGGY | 1 cut(s) | 590 |
| Bse1I | ACTGG | 3 cut(s) | 55, 247, 540 |
| Bse3DI | GCAATG | 2 cut(s) | 123, 453 |
| BseDI | CCNNGG | 1 cut(s) | 604 |
| BseGI | GGATG | 2 cut(s) | 516, 579 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BseMI | GCAATG | 2 cut(s) | 123, 453 |
| BseMII | CTCAG | 1 cut(s) | 485 |
| BseNI | ACTGG | 3 cut(s) | 55, 247, 540 |
| BseRI | GAGGAG | 1 cut(s) | 490 |
| BseXI | GCAGC | 1 cut(s) | 229 |
| BshNI | GGYRCC | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 591 |
| BslFI | GGGAC | 1 cut(s) | 275 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BsmAI | GTCTC | 1 cut(s) | 490 |
| BsmFI | GGGAC | 1 cut(s) | 275 |
| Bsp143I | GATC | 1 cut(s) | 417 |
| Bsp19I | CCATGG | 1 cut(s) | 604 |
| BspCNI | CTCAG | 1 cut(s) | 486 |
| BspLI | GGNNCC | 2 cut(s) | 10, 154 |
| BspT107I | GGYRCC | 1 cut(s) | 152 |
| BsrDI | GCAATG | 2 cut(s) | 123, 453 |
| BsrFI | RCCGGY | 1 cut(s) | 590 |
| BsrI | ACTGG | 3 cut(s) | 55, 247, 540 |
| BssAI | RCCGGY | 1 cut(s) | 590 |
| BssECI | CCNNGG | 1 cut(s) | 604 |
| BssMI | GATC | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 1 cut(s) | 604 |
| Bst4CI | ACNGT | 1 cut(s) | 141 |
| BstDEI | CTNAG | 1 cut(s) | 494 |
| BstDSI | CCRYGG | 1 cut(s) | 604 |
| BstF5I | GGATG | 2 cut(s) | 516, 579 |
| BstKTI | GATC | 1 cut(s) | 420 |
| BstMAI | GTCTC | 1 cut(s) | 490 |
| BstMBI | GATC | 1 cut(s) | 417 |
| BstSFI | CTRYAG | 1 cut(s) | 194 |
| BstV1I | GCAGC | 1 cut(s) | 229 |
| BtgI | CCRYGG | 1 cut(s) | 604 |
| BtsCI | GGATG | 2 cut(s) | 516, 579 |
| BtsI | GCAGTG | 1 cut(s) | 465 |
| BtsIMutI | CAGTG | 1 cut(s) | 465 |
| Cfr10I | RCCGGY | 1 cut(s) | 590 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 412, 447 |
| CviAII | CATG | 5 cut(s) | 115, 163, 298, 565, 605 |
| DdeI | CTNAG | 1 cut(s) | 494 |
| DpnI | GATC | 1 cut(s) | 419 |
| DpnII | GATC | 1 cut(s) | 417 |
| DriI | GACNNNNNGTC | 1 cut(s) | 503 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 503 |
| Eco130I | CCWWGG | 1 cut(s) | 604 |
| EcoRI | GAATTC | 1 cut(s) | 301 |
| EcoT14I | CCWWGG | 1 cut(s) | 604 |
| ErhI | CCWWGG | 1 cut(s) | 604 |
| FaeI | CATG | 5 cut(s) | 118, 166, 301, 568, 608 |
| FaqI | GGGAC | 1 cut(s) | 275 |
| FatI | CATG | 5 cut(s) | 114, 162, 297, 564, 604 |
| Fnu4HI | GCNGC | 1 cut(s) | 243 |
| FokI | GGATG | 2 cut(s) | 503, 586 |
| Fsp4HI | GCNGC | 1 cut(s) | 243 |
| GluI | GCNGC | 1 cut(s) | 243 |
| HapII | CCGG | 1 cut(s) | 591 |
| Hin1II | CATG | 5 cut(s) | 118, 166, 301, 568, 608 |
| HinfI | GANTC | 4 cut(s) | 209, 450, 547, 561 |
| HpaII | CCGG | 1 cut(s) | 591 |
| HphI | GGTGA | 3 cut(s) | 267, 412, 580 |
| Hpy166II | GTNNAC | 1 cut(s) | 514 |
| Hpy188I | TCNGA | 2 cut(s) | 307, 415 |
| Hpy188III | TCNNGA | 1 cut(s) | 398 |
| Hpy8I | GTNNAC | 1 cut(s) | 514 |
| HpyAV | CCTTC | 3 cut(s) | 324, 357, 390 |
| HpyCH4III | ACNGT | 1 cut(s) | 141 |
| HpyCH4IV | ACGT | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 2 cut(s) | 146, 458 |
| HpyF3I | CTNAG | 1 cut(s) | 494 |
| HpySE526I | ACGT | 1 cut(s) | 32 |
| Hsp92II | CATG | 5 cut(s) | 118, 166, 301, 568, 608 |
| Kzo9I | GATC | 1 cut(s) | 417 |
| LmnI | GCTCC | 4 cut(s) | 98, 116, 164, 381 |
| LpnPI | CCDG | 9 cut(s) | 36, 121, 135, 169, 203, 260, 351, 521, 604 |
| Lsp1109I | GCAGC | 1 cut(s) | 229 |
| LweI | GCATC | 3 cut(s) | 155, 401, 424 |
| MaeII | ACGT | 1 cut(s) | 32 |
| MaeIII | GTNAC | 4 cut(s) | 33, 273, 482, 582 |
| MalI | GATC | 1 cut(s) | 419 |
| MboI | GATC | 1 cut(s) | 417 |
| MluCI | AATT | 5 cut(s) | 45, 253, 279, 301, 521 |
| MlyI | GAGTC | 2 cut(s) | 218, 444 |
| MmeI | TCCRAC | 2 cut(s) | 98, 524 |
| MnlI | CCTC | 4 cut(s) | 72, 187, 354, 468 |
| MseI | TTAA | 1 cut(s) | 215 |
| MslI | CAYNNNNRTG | 1 cut(s) | 458 |
| MspI | CCGG | 1 cut(s) | 591 |
| NcoI | CCATGG | 1 cut(s) | 604 |
| NdeII | GATC | 1 cut(s) | 417 |
| NlaIII | CATG | 5 cut(s) | 118, 166, 301, 568, 608 |
| NlaIV | GGNNCC | 2 cut(s) | 10, 154 |
| NmuCI | GTSAC | 2 cut(s) | 273, 582 |
| PfeI | GAWTC | 2 cut(s) | 547, 561 |
| PkrI | GCNGC | 1 cut(s) | 244 |
| PleI | GAGTC | 2 cut(s) | 217, 444 |
| PpsI | GAGTC | 2 cut(s) | 217, 444 |
| Psp1406I | AACGTT | 1 cut(s) | 32 |
| PspN4I | GGNNCC | 2 cut(s) | 10, 154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 458 |
| SaqAI | TTAA | 1 cut(s) | 215 |
| SatI | GCNGC | 1 cut(s) | 243 |
| Sau3AI | GATC | 1 cut(s) | 417 |
| SchI | GAGTC | 2 cut(s) | 218, 444 |
| SfaNI | GCATC | 3 cut(s) | 155, 401, 424 |
| SfcI | CTRYAG | 1 cut(s) | 194 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 458 |
| SmlI | CTYRAG | 2 cut(s) | 363, 396 |
| SmoI | CTYRAG | 2 cut(s) | 363, 396 |
| Sse9I | AATT | 5 cut(s) | 45, 253, 279, 301, 521 |
| StyI | CCWWGG | 1 cut(s) | 604 |
| TaaI | ACNGT | 1 cut(s) | 141 |
| TaiI | ACGT | 1 cut(s) | 35 |
| TaqI | TCGA | 1 cut(s) | 317 |
| TasI | AATT | 5 cut(s) | 45, 253, 279, 301, 521 |
| TfiI | GAWTC | 2 cut(s) | 547, 561 |
| Tru1I | TTAA | 1 cut(s) | 215 |
| Tru9I | TTAA | 1 cut(s) | 215 |
| TscAI | CASTG | 1 cut(s) | 465 |
| TseFI | GTSAC | 2 cut(s) | 273, 582 |
| TseI | GCWGC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 2 cut(s) | 273, 582 |
| TspDTI | ATGAA | 3 cut(s) | 314, 396, 539 |
| TspRI | CASTG | 1 cut(s) | 465 |
| XapI | RAATTY | 1 cut(s) | 301 |