RchiOBHm_Chr7g0232121

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
56051201 .. 56052726
1526 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20804

Sequence Viewer

Length: 1185 bp
ATGTTCTACATTACTCTAGCAGCTGCAGGCTTCTCTTTATTAGTGCAGAGATCCTTCACAGTATTGTTTTGCAGAAATGATGCCAAGCTTATTGAAGACATTGCACAAGATATAAGTAATAAATTGATTGAAATCTTATCTCGTCGTTATGACCGAAAGAAATATAAGATTGTATCTTGCACTAGTCCTACGACCTATGATGTCTTTCTGAATTTTAGGGGAGACGACACTCGCAAAATCTTTGTTGGTCATCTTTACAAAGCTCTGGAGCAGAAAGAAATCAACACCTTTATAGATTCTGAAGAGGTTGGAAAAGGCAACAACCTATCAATGCTAGAACAAGCTATTCAAGATTCAAGGATTTCGATTGTAGTTTTCTCTGAAAACTATGCTTCTTCCACATGGTGCTTGAAAGAGCTCGTCAGAATCCTGAAATGTATGGATATAAAGAAGCAGATAGTGGTGCCTATTTTGTATGAAGTAGATCCATTTGATGTTCGTAATTTGAAGGGAAGCTTCGCAGAAGCTTTTGCGAAACATGAAAACAGTTCTAATACCAACAAGGAAGAGGTGGAGAGCTGGAAGTCTGCTCTAACTAGAGTCACAAATTTATCTTGCTGGGATTCGAGAAAATATGAAGATGATGCCAAGCGTGTTGAGGAGATAGTAATACATGTTAATGAATTGGTCCACGTCTGGTCATCAAAAGCCAATAGCTTGGTTGGAATGAATTCCCGCATAAAAGAAATGGATTTGCTATTATGTAATGGGATATATGATGTTCGCGTTGTTGGAATATGGGGAATGGTTGGCATTGGCAAAACAACCATTGCTAGAGCTGTTTATGACAAAATCGCTCGTCAATTTGAGCACAGTTGCTTTCTTGAAAATGTCAAGGAACGTTTCATGAAGAATGATGCGGTACAAATGCAAGAAGAACTGCTATCTAGGATGTTGAAGAAAAAAGTGCGAAGTGTAGGCACTTTGAGTAGAGGCTCAAAGATGATGATGGAAAGGCTGGGTAACAGGAAAGTTTTGCTTGTTCTGGATGATGTGGAAAACACTGCCCAGATTGAAGCCTTACTTGGGAAGCAACATTCATTTGGTCTTGGAAGTAAAATTATTATAACAAGCAGAGATCTACAAGCACTGAGTAGAAAGAAACCAGCCCACAGGAGAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

394

Amino Acids

45.16

Weight (kDa)

9.18

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 66 - 238 2.3e-50 TIR domain
TIR_2 PF13676 68 - 163 1.1e-14 TIR domain
NB-ARC PF00931 260 - 382 3.2e-14 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1127
AccB1I GGYRCC 1 cut(s) 463
AccII CGCG 1 cut(s) 786
AciI CCGC 2 cut(s) 736, 920
AclI AACGTT 1 cut(s) 901
AclWI GGATC 2 cut(s) 45, 479
AcsI RAATTY 3 cut(s) 211, 607, 730
AcuI CTGAAG 1 cut(s) 321
AdeI CACNNNGTG 1 cut(s) 405
AfaI GTAC 1 cut(s) 924
AfiI CCNNNNNNNGG 1 cut(s) 1086
AflIII ACRYGT 1 cut(s) 673
AgsI TTSAA 9 cut(s) 95, 131, 350, 357, 412, 508, 887, 958, 1076
AhlI ACTAGT 1 cut(s) 182
AjiI CACGTC 1 cut(s) 694
AjuI GAANNNNNNNTTGG 2 cut(s) 1068, 1100
Alw21I GWGCWC 2 cut(s) 420, 873
Alw26I GTCTC 1 cut(s) 216
AlwI GGATC 2 cut(s) 45, 479
ApeKI GCWGC 2 cut(s) 20, 23
ApoI RAATTY 3 cut(s) 211, 607, 730
Asp700I GAANNNNTTC 1 cut(s) 730
AspS9I GGNCC 1 cut(s) 688
AvaII GGWCC 1 cut(s) 688
BanI GGYRCC 1 cut(s) 463
BanII GRGCYC 1 cut(s) 420
BbsI GAAGAC 1 cut(s) 102
Bbv12I GWGCWC 2 cut(s) 420, 873
BbvI GCAGC 2 cut(s) 10, 32
BccI CCATC 1 cut(s) 1003
BcoDI GTCTC 1 cut(s) 216
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 6 cut(s) 17, 183, 335, 597, 834, 948
BfmI CTRYAG 1 cut(s) 24
BglII AGATCT 1 cut(s) 1138
BisI GCNGC 2 cut(s) 21, 24
BlsI GCNGC 2 cut(s) 22, 25
Bme18I GGWCC 1 cut(s) 688
BmgBI CACGTC 1 cut(s) 694
BmgT120I GGNCC 1 cut(s) 688
BmiI GGNNCC 1 cut(s) 465
BmsI GCATC 3 cut(s) 70, 634, 907
BpiI GAAGAC 1 cut(s) 102
BpmI CTGGAG 1 cut(s) 287
BsaBI GATNNNNATC 1 cut(s) 131
Bsc4I CCNNNNNNNGG 1 cut(s) 1086
Bse3DI GCAATG 2 cut(s) 99, 828
Bse8I GATNNNNATC 1 cut(s) 131
BseGI GGATG 2 cut(s) 957, 1054
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 1 cut(s) 1086
BseMI GCAATG 2 cut(s) 99, 828
BseMII CTCAG 1 cut(s) 1142
BseRI GAGGAG 1 cut(s) 674
BseXI GCAGC 2 cut(s) 10, 32
BseYI CCCAGC 2 cut(s) 618, 1018
BsgI GTGCAG 1 cut(s) 65
Bsh1236I CGCG 1 cut(s) 786
BshNI GGYRCC 1 cut(s) 463
BsiHKAI GWGCWC 2 cut(s) 420, 873
BslI CCNNNNNNNGG 1 cut(s) 1086
BsmAI GTCTC 1 cut(s) 216
BsmBI CGTCTC 1 cut(s) 216
Bsp1286I GDGCHC 2 cut(s) 420, 873
Bsp143I GATC 3 cut(s) 50, 484, 1138
BspACI CCGC 2 cut(s) 736, 920
BspCNI CTCAG 1 cut(s) 1143
BspFNI CGCG 1 cut(s) 786
BspHI TCATGA 1 cut(s) 906
BspLI GGNNCC 1 cut(s) 465
BspMAI CTGCAG 1 cut(s) 28
BspPI GGATC 2 cut(s) 45, 479
BspT107I GGYRCC 1 cut(s) 463
BsrDI GCAATG 2 cut(s) 99, 828
BssMI GATC 3 cut(s) 50, 484, 1138
Bst4CI ACNGT 3 cut(s) 61, 548, 875
Bst6I CTCTTC 2 cut(s) 297, 561
BstC8I GCNNGC 1 cut(s) 28
BstDEI CTNAG 1 cut(s) 1151
BstF5I GGATG 2 cut(s) 957, 1054
BstFNI CGCG 1 cut(s) 786
BstKTI GATC 3 cut(s) 53, 487, 1141
BstMAI GTCTC 1 cut(s) 216
BstMBI GATC 3 cut(s) 50, 484, 1138
BstNSI RCATGY 1 cut(s) 677
BstSFI CTRYAG 1 cut(s) 24
BstUI CGCG 1 cut(s) 786
BstV1I GCAGC 2 cut(s) 10, 32
BstV2I GAAGAC 1 cut(s) 102
BstX2I RGATCY 3 cut(s) 50, 484, 1138
BstXI CCANNNNNNTGG 1 cut(s) 718
BstYI RGATCY 3 cut(s) 50, 484, 1138
BtrI CACGTC 1 cut(s) 694
BtsCI GGATG 2 cut(s) 957, 1054
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 2 cut(s) 1062, 1148
Cac8I GCNNGC 1 cut(s) 28
CciI TCATGA 1 cut(s) 906
Cfr13I GGNCC 1 cut(s) 688
Csp6I GTAC 1 cut(s) 923
CviAII CATG 4 cut(s) 402, 539, 674, 907
CviQI GTAC 1 cut(s) 923
DdeI CTNAG 1 cut(s) 1151
DpnI GATC 3 cut(s) 52, 486, 1140
DpnII GATC 3 cut(s) 50, 484, 1138
DraIII CACNNNGTG 1 cut(s) 405
Eam1104I CTCTTC 2 cut(s) 297, 561
EarI CTCTTC 2 cut(s) 297, 561
Ecl136II GAGCTC 1 cut(s) 418
Eco24I GRGCYC 1 cut(s) 420
Eco47I GGWCC 1 cut(s) 688
Eco53kI GAGCTC 1 cut(s) 418
Eco57I CTGAAG 1 cut(s) 321
EcoICRI GAGCTC 1 cut(s) 418
EcoRI GAATTC 1 cut(s) 730
EcoT38I GRGCYC 1 cut(s) 420
Esp3I CGTCTC 1 cut(s) 216
FaeI CATG 4 cut(s) 405, 542, 677, 910
FalI AAGNNNNNCTT 6 cut(s) 500, 532, 1023, 1055, 1068, 1100
FatI CATG 4 cut(s) 401, 538, 673, 906
FauI CCCGC 1 cut(s) 743
Fnu4HI GCNGC 2 cut(s) 21, 24
FokI GGATG 2 cut(s) 964, 1061
FriOI GRGCYC 1 cut(s) 420
Fsp4HI GCNGC 2 cut(s) 21, 24
FspBI CTAG 6 cut(s) 17, 183, 335, 597, 834, 948
GluI GCNGC 2 cut(s) 21, 24
GsaI CCCAGC 2 cut(s) 622, 1022
GsuI CTGGAG 1 cut(s) 287
Hin1II CATG 4 cut(s) 405, 542, 677, 910
HindIII AAGCTT 3 cut(s) 86, 514, 525
HinfI GANTC 5 cut(s) 296, 353, 426, 600, 623
Hpy166II GTNNAC 1 cut(s) 691
Hpy188I TCNGA 4 cut(s) 210, 301, 382, 425
Hpy188III TCNNGA 7 cut(s) 266, 350, 430, 627, 884, 907, 1046
Hpy8I GTNNAC 1 cut(s) 691
Hpy99I CGWCG 1 cut(s) 147
HpyAV CCTTC 2 cut(s) 64, 502
HpyCH4III ACNGT 3 cut(s) 61, 548, 875
HpyCH4IV ACGT 2 cut(s) 693, 901
HpyCH4V TGCA 6 cut(s) 26, 46, 72, 104, 180, 931
HpyF3I CTNAG 1 cut(s) 1151
HpySE526I ACGT 2 cut(s) 693, 901
Hsp92II CATG 4 cut(s) 405, 542, 677, 910
Kzo9I GATC 3 cut(s) 50, 484, 1138
LmnI GCTCC 1 cut(s) 268
Lsp1109I GCAGC 2 cut(s) 10, 32
LweI GCATC 3 cut(s) 70, 634, 907
MaeI CTAG 6 cut(s) 17, 183, 335, 597, 834, 948
MaeII ACGT 2 cut(s) 693, 901
MaeIII GTNAC 2 cut(s) 601, 1022
MalI GATC 3 cut(s) 52, 486, 1140
MboI GATC 3 cut(s) 50, 484, 1138
MboII GAAGA 8 cut(s) 107, 314, 387, 578, 650, 922, 947, 970
MflI RGATCY 3 cut(s) 50, 484, 1138
MhlI GDGCHC 2 cut(s) 420, 873
MluCI AATT 8 cut(s) 122, 211, 502, 607, 683, 730, 863, 1119
MlyI GAGTC 1 cut(s) 609
MmeI TCCRAC 3 cut(s) 289, 703, 772
MnlI CCTC 4 cut(s) 298, 562, 652, 986
MroXI GAANNNNTTC 1 cut(s) 730
MseI TTAA 1 cut(s) 678
MslI CAYNNNNRTG 1 cut(s) 678
MspA1I CMGCKG 1 cut(s) 23
MvnI CGCG 1 cut(s) 786
NdeII GATC 3 cut(s) 50, 484, 1138
NlaIII CATG 4 cut(s) 405, 542, 677, 910
NlaIV GGNNCC 1 cut(s) 465
NmuCI GTSAC 1 cut(s) 601
NspI RCATGY 1 cut(s) 677
PagI TCATGA 1 cut(s) 906
PciI ACATGT 1 cut(s) 673
PcsI WCGNNNNNNNCGW 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 730
PfeI GAWTC 4 cut(s) 296, 353, 426, 623
PkrI GCNGC 2 cut(s) 22, 25
PleI GAGTC 1 cut(s) 608
PpsI GAGTC 1 cut(s) 608
PscI ACATGT 1 cut(s) 673
PsiI TTATAA 1 cut(s) 1127
Psp124BI GAGCTC 1 cut(s) 420
Psp1406I AACGTT 1 cut(s) 901
PspFI CCCAGC 2 cut(s) 618, 1018
PspN4I GGNNCC 1 cut(s) 465
PspPI GGNCC 1 cut(s) 688
PstI CTGCAG 1 cut(s) 28
PsuI RGATCY 3 cut(s) 50, 484, 1138
PvuII CAGCTG 1 cut(s) 23
RsaI GTAC 1 cut(s) 924
RsaNI GTAC 1 cut(s) 923
RseI CAYNNNNRTG 1 cut(s) 678
SacI GAGCTC 1 cut(s) 420
SaqAI TTAA 1 cut(s) 678
SatI GCNGC 2 cut(s) 21, 24
Sau3AI GATC 3 cut(s) 50, 484, 1138
Sau96I GGNCC 1 cut(s) 688
SchI GAGTC 1 cut(s) 609
SduI GDGCHC 2 cut(s) 420, 873
SfaNI GCATC 3 cut(s) 70, 634, 907
SfcI CTRYAG 1 cut(s) 24
SinI GGWCC 1 cut(s) 688
SmiMI CAYNNNNRTG 1 cut(s) 678
SpeI ACTAGT 1 cut(s) 182
Sse9I AATT 8 cut(s) 122, 211, 502, 607, 683, 730, 863, 1119
SsiI CCGC 2 cut(s) 736, 920
SspMI CTAG 6 cut(s) 17, 183, 335, 597, 834, 948
SstI GAGCTC 1 cut(s) 420
TaaI ACNGT 3 cut(s) 61, 548, 875
TaiI ACGT 2 cut(s) 696, 904
TaqI TCGA 2 cut(s) 365, 626
TaqII GACCGA 1 cut(s) 168
TasI AATT 8 cut(s) 122, 211, 502, 607, 683, 730, 863, 1119
TfiI GAWTC 4 cut(s) 296, 353, 426, 623
Tru1I TTAA 1 cut(s) 678
Tru9I TTAA 1 cut(s) 678
TscAI CASTG 2 cut(s) 1069, 1155
TseFI GTSAC 1 cut(s) 601
TseI GCWGC 2 cut(s) 20, 23
Tsp45I GTSAC 1 cut(s) 601
TspDTI ATGAA 8 cut(s) 492, 555, 651, 696, 743, 895, 923, 1089
TspRI CASTG 2 cut(s) 1069, 1155
VpaK11BI GGWCC 1 cut(s) 688
XapI RAATTY 3 cut(s) 211, 607, 730
XceI RCATGY 1 cut(s) 677
XmnI GAANNNNTTC 1 cut(s) 730
XspI CTAG 6 cut(s) 17, 183, 335, 597, 834, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.