FvH4_2g00210

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
301862 .. 305872
4011 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g00210.t2

Sequence Viewer

Length: 1266 bp
ATGAGGGGGAAACAGGTTTCAGGAAAGGCGATGCTGATTCTATGTGTTGCAAGTTTCTTTGCAGGATCACTGTTCAGTACTACAAGCCGCACCTGGAGTAGTTCTAGTACTACTCTAGATGCTGGTGGTGACCAACCTAATGGCGGCCATGAAGCTCATCCATTTCCCGTCGTTTCCAAGTACCACATCCATAATAACCACCTAGACGAAAAAGCCAAATCCAATGGGGCTGCAGCACTAGTCACACAAACTACTTGCAATGATGATCACAAGCGAAAATTGGTTGAAGGAAATTCTGGTGATGATATTATGGGGGAGGTGGCAAAGACTCACCAAGCTATCAAATCACTGGATAAGACAGTTTCAACACTGGAGATGGAATTGGCAGCAGCTCGAGCATCAAACCAGAGAATGAGTTCATCATCATCTAATTTCAATCCTAAAAGACAAAAGGCTTTCGTTGTCATCGGAATCAACACCGCCTTTAGCAGCAAGAAACGACGGAAATCAGTTCGAGAAACCTGGATGCCTACAGGAAATGAGCTGACGAAGTTGGAGAAGGAGAAAGGGATCGTAATCCGGTTTGTGATAGGAAGGAGCGCGACTCCTGGAGGGTTACTTGAGAGAGCGATTGAGGCAGAAGAGGCGGAGCACAACGACTTTCTTAGGCTCAAACATGTGGAGGGCTACCACGAGCTCTCCACCAAGACCCGCCTCTATTTCACCACCGCCATCTCCATTTGGGATGCCGAGTTTTATGTCAAGGTCGACGATGATGTGCATCTCAATCTCGGTATGCTGGCGACTACGCTTGCAAGGCACCGTTCCAAACCCAGAATTTATATTGGTTGCATGAAGTCAGGCCCAGTTCTATATCAAAAAGGGGTCAAATATCACGAGCCGGAGTATTGGAAATTCGGGGAAGAAGGGAACAAGTATTTCATGCATGCCACCGGCCAAATCTATGCCATCTCTAAGGACCTTGCCGCCTACATTTCCACCAATTTGCCCATATTGCATAGGTATGCGAATGAGGACGTGTCACTGGGCTCGTGGTTGATTGGGCTTGAGGTTGAGCACATCGATGAACGCTCCATGTGTTGTGCTACCGCTCCAGATTGTGGACGGATGGCACAAGCCGGGAACGTTTGTGTGGCGTCGTTTGACTGGAAGTGTAGCGGAATATGCAACTCCGTTGAGAGGATGAAAGACGTGCATAACTCTTGTGGTGAGGTAGCTGCAGCTGTTTGGAACCTTGAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

422

Amino Acids

46.62

Weight (kDa)

8.23

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4094 PF13334 81 - 134 3.2e-14 Domain of unknown function (DUF4094)
Galactosyl_T PF01762 166 - 362 3.9e-45 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 819
AccB7I CCANNNNNTGG 1 cut(s) 1121
AccBSI CCGCTC 1 cut(s) 1112
AccI GTMKAC 1 cut(s) 768
AccII CGCG 1 cut(s) 602
AciI CCGC 9 cut(s) 88, 144, 480, 647, 712, 729, 987, 1110, 1179
AclI AACGTT 1 cut(s) 1146
AclWI GGATC 2 cut(s) 73, 578
AcoI YGGCCR 2 cut(s) 145, 955
AcsI RAATTY 3 cut(s) 292, 837, 914
AcyI GRCGYC 1 cut(s) 1157
AfaI GTAC 3 cut(s) 79, 109, 182
AfiI CCNNNNNNNGG 3 cut(s) 143, 1121, 1200
AflIII ACRYGT 2 cut(s) 676, 1038
AgsI TTSAA 4 cut(s) 287, 366, 436, 1259
AhlI ACTAGT 1 cut(s) 238
AjiI CACGTC 2 cut(s) 1039, 1213
AjnI CCWGG 3 cut(s) 92, 521, 607
AluBI AGCT 7 cut(s) 155, 338, 392, 544, 697, 1238, 1244
AluI AGCT 7 cut(s) 155, 338, 392, 544, 697, 1238, 1244
Alw21I GWGCWC 3 cut(s) 654, 699, 1080
AlwI GGATC 2 cut(s) 73, 578
Ama87I CYCGRG 1 cut(s) 393
AoxI GGCC 3 cut(s) 145, 862, 955
ApeKI GCWGC 7 cut(s) 230, 233, 386, 389, 489, 1238, 1241
ApoI RAATTY 3 cut(s) 292, 837, 914
Asp700I GAANNNNTTC 1 cut(s) 415
AspLEI GCGC 1 cut(s) 602
AspS9I GGNCC 2 cut(s) 863, 979
AsuC2I CCSGG 1 cut(s) 1141
AsuHPI GGTGA 5 cut(s) 140, 311, 323, 715, 1241
AvaI CYCGRG 1 cut(s) 393
AvaII GGWCC 1 cut(s) 979
BanI GGYRCC 1 cut(s) 819
BanII GRGCYC 2 cut(s) 699, 1052
BauI CACGAG 3 cut(s) 692, 896, 1051
Bbv12I GWGCWC 3 cut(s) 654, 699, 1080
BbvI GCAGC 7 cut(s) 217, 245, 398, 401, 501, 1225, 1253
BccI CCATC 4 cut(s) 370, 740, 977, 1123
BciT130I CCWGG 3 cut(s) 94, 523, 609
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 1 cut(s) 1141
BcuI ACTAGT 1 cut(s) 238
BfaI CTAG 4 cut(s) 105, 116, 203, 239
BfmI CTRYAG 3 cut(s) 231, 531, 1239
BmcAI AGTACT 2 cut(s) 79, 109
Bme1390I CCNGG 4 cut(s) 94, 523, 609, 1141
Bme18I GGWCC 1 cut(s) 979
BmeT110I CYCGRG 1 cut(s) 393
BmgBI CACGTC 2 cut(s) 1039, 1213
BmgT120I GGNCC 2 cut(s) 863, 979
BmiI GGNNCC 2 cut(s) 821, 1253
BmrFI CCNGG 4 cut(s) 94, 523, 609, 1141
BmrI ACTGGG 2 cut(s) 860, 1055
BmsI GCATC 6 cut(s) 21, 109, 407, 516, 736, 790
BmuI ACTGGG 2 cut(s) 860, 1055
BplI GAGNNNNNCTC 2 cut(s) 589, 621
BpmI CTGGAG 4 cut(s) 115, 392, 630, 1098
BpuEI CTTGAG 2 cut(s) 641, 1088
BpuMI CCSGG 1 cut(s) 1141
Bsa29I ATCGAT 1 cut(s) 1083
BsaBI GATNNNNATC 2 cut(s) 575, 780
BsaHI GRCGYC 1 cut(s) 1157
BsaWI WCCGGW 1 cut(s) 579
BsaXI ACNNNNNCTCC 2 cut(s) 683, 713
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 1121, 1200
Bse118I RCCGGY 1 cut(s) 953
Bse1I ACTGG 5 cut(s) 354, 375, 866, 1050, 1172
Bse3DI GCAATG 1 cut(s) 265
Bse8I GATNNNNATC 2 cut(s) 575, 780
BseBI CCWGG 3 cut(s) 94, 523, 609
BseCI ATCGAT 1 cut(s) 1083
BseGI GGATG 6 cut(s) 157, 186, 531, 751, 1134, 1209
BseJI GATNNNNATC 2 cut(s) 575, 780
BseLI CCNNNNNNNGG 3 cut(s) 143, 1121, 1200
BseMI GCAATG 1 cut(s) 265
BseNI ACTGG 5 cut(s) 354, 375, 866, 1050, 1172
BseXI GCAGC 7 cut(s) 217, 245, 398, 401, 501, 1225, 1253
Bsh1236I CGCG 1 cut(s) 602
BshFI GGCC 3 cut(s) 147, 864, 957
BshNI GGYRCC 1 cut(s) 819
BshVI ATCGAT 1 cut(s) 1083
BsiHKAI GWGCWC 3 cut(s) 654, 699, 1080
BsiHKCI CYCGRG 1 cut(s) 393
BsiSI CCGG 4 cut(s) 580, 902, 954, 1140
BslI CCNNNNNNNGG 3 cut(s) 143, 1121, 1200
BsnI GGCC 3 cut(s) 147, 864, 957
BsoBI CYCGRG 1 cut(s) 393
Bsp1286I GDGCHC 4 cut(s) 654, 699, 1052, 1080
Bsp143I GATC 3 cut(s) 65, 265, 570
BspACI CCGC 9 cut(s) 88, 144, 480, 647, 712, 729, 987, 1110, 1179
BspANI GGCC 3 cut(s) 147, 864, 957
BspDI ATCGAT 1 cut(s) 1083
BspFNI CGCG 1 cut(s) 602
BspLI GGNNCC 2 cut(s) 821, 1253
BspMAI CTGCAG 2 cut(s) 235, 1243
BspPI GGATC 2 cut(s) 73, 578
BspT107I GGYRCC 1 cut(s) 819
BsrBI CCGCTC 1 cut(s) 1112
BsrDI GCAATG 1 cut(s) 265
BsrFI RCCGGY 1 cut(s) 953
BsrI ACTGG 5 cut(s) 354, 375, 866, 1050, 1172
BssAI RCCGGY 1 cut(s) 953
BssMI GATC 3 cut(s) 65, 265, 570
BssNI GRCGYC 1 cut(s) 1157
BssSI CACGAG 3 cut(s) 692, 896, 1051
Bst2BI CACGAG 3 cut(s) 692, 896, 1051
Bst2UI CCWGG 3 cut(s) 94, 523, 609
Bst4CI ACNGT 3 cut(s) 72, 361, 824
Bst6I CTCTTC 1 cut(s) 636
BstACI GRCGYC 1 cut(s) 1157
BstC8I GCNNGC 3 cut(s) 801, 813, 948
BstDEI CTNAG 2 cut(s) 665, 975
BstEII GGTNACC 1 cut(s) 128
BstF5I GGATG 6 cut(s) 157, 186, 531, 751, 1134, 1209
BstFNI CGCG 1 cut(s) 602
BstHHI GCGC 1 cut(s) 602
BstKTI GATC 3 cut(s) 68, 268, 573
BstMBI GATC 3 cut(s) 65, 265, 570
BstMWI GCNNNNNNNGC 6 cut(s) 395, 635, 644, 817, 1015, 1185
BstNI CCWGG 3 cut(s) 94, 523, 609
BstNSI RCATGY 2 cut(s) 680, 950
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 4 cut(s) 92, 521, 607, 1139
BstSFI CTRYAG 3 cut(s) 231, 531, 1239
BstUI CGCG 1 cut(s) 602
BstV1I GCAGC 7 cut(s) 217, 245, 398, 401, 501, 1225, 1253
BstXI CCANNNNNNTGG 1 cut(s) 140
Bsu15I ATCGAT 1 cut(s) 1083
BsuRI GGCC 3 cut(s) 147, 864, 957
BsuTUI ATCGAT 1 cut(s) 1083
BtgZI GCGATG 1 cut(s) 44
BtrI CACGTC 2 cut(s) 1039, 1213
BtsCI GGATG 6 cut(s) 157, 186, 531, 751, 1134, 1209
BtsIMutI CAGTG 4 cut(s) 68, 347, 368, 1043
Cac8I GCNNGC 3 cut(s) 801, 813, 948
CfoI GCGC 1 cut(s) 602
Cfr10I RCCGGY 1 cut(s) 953
Cfr13I GGNCC 2 cut(s) 863, 979
ClaI ATCGAT 1 cut(s) 1083
CseI GACGC 1 cut(s) 1146
Csp6I GTAC 3 cut(s) 78, 108, 181
CviAII CATG 6 cut(s) 149, 677, 853, 943, 947, 1096
CviQI GTAC 3 cut(s) 78, 108, 181
DdeI CTNAG 2 cut(s) 665, 975
DpnI GATC 3 cut(s) 67, 267, 572
DpnII GATC 3 cut(s) 65, 265, 570
EaeI YGGCCR 2 cut(s) 145, 955
Eam1104I CTCTTC 1 cut(s) 636
EarI CTCTTC 1 cut(s) 636
EciI GGCGGA 1 cut(s) 662
Ecl136II GAGCTC 1 cut(s) 697
Eco24I GRGCYC 2 cut(s) 699, 1052
Eco47I GGWCC 1 cut(s) 979
Eco53kI GAGCTC 1 cut(s) 697
Eco88I CYCGRG 1 cut(s) 393
Eco91I GGTNACC 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 697
EcoO109I RGGNCCY 1 cut(s) 979
EcoO65I GGTNACC 1 cut(s) 128
EcoRII CCWGG 3 cut(s) 92, 521, 607
EcoT22I ATGCAT 1 cut(s) 948
EcoT38I GRGCYC 2 cut(s) 699, 1052
FaeI CATG 6 cut(s) 152, 680, 856, 946, 950, 1099
FatI CATG 6 cut(s) 148, 676, 852, 942, 946, 1095
FauI CCCGC 1 cut(s) 719
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 1 cut(s) 768
FokI GGATG 6 cut(s) 144, 173, 538, 758, 1141, 1216
FriOI GRGCYC 2 cut(s) 699, 1052
FspBI CTAG 4 cut(s) 105, 116, 203, 239
GlaI GCGC 1 cut(s) 601
GsuI CTGGAG 4 cut(s) 115, 392, 630, 1098
HaeIII GGCC 3 cut(s) 147, 864, 957
HapII CCGG 4 cut(s) 580, 902, 954, 1140
HgaI GACGC 1 cut(s) 1146
HhaI GCGC 1 cut(s) 602
Hin1I GRCGYC 1 cut(s) 1157
Hin1II CATG 6 cut(s) 152, 680, 856, 946, 950, 1099
Hin6I GCGC 1 cut(s) 600
HinP1I GCGC 1 cut(s) 600
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HinfI GANTC 4 cut(s) 37, 328, 471, 604
HpaII CCGG 4 cut(s) 580, 902, 954, 1140
HphI GGTGA 5 cut(s) 140, 311, 323, 715, 1241
Hpy166II GTNNAC 2 cut(s) 769, 1124
Hpy188I TCNGA 1 cut(s) 470
Hpy188III TCNNGA 5 cut(s) 21, 116, 515, 896, 1115
Hpy8I GTNNAC 2 cut(s) 769, 1124
Hpy99I CGWCG 4 cut(s) 173, 504, 773, 1162
HpyAV CCTTC 4 cut(s) 281, 553, 588, 920
HpyCH4III ACNGT 3 cut(s) 72, 361, 824
HpyCH4IV ACGT 3 cut(s) 1038, 1146, 1212
HpyF10VI GCNNNNNNNGC 6 cut(s) 395, 635, 644, 817, 1015, 1185
HpyF3I CTNAG 2 cut(s) 665, 975
HpySE526I ACGT 3 cut(s) 1038, 1146, 1212
Hsp92I GRCGYC 1 cut(s) 1157
Hsp92II CATG 6 cut(s) 152, 680, 856, 946, 950, 1099
HspAI GCGC 1 cut(s) 600
Ksp22I TGATCA 1 cut(s) 265
Kzo9I GATC 3 cut(s) 65, 265, 570
LmnI GCTCC 4 cut(s) 597, 649, 1097, 1117
Lsp1109I GCAGC 7 cut(s) 217, 245, 398, 401, 501, 1225, 1253
LweI GCATC 6 cut(s) 21, 109, 407, 516, 736, 790
MaeI CTAG 4 cut(s) 105, 116, 203, 239
MaeII ACGT 3 cut(s) 1038, 1146, 1212
MaeIII GTNAC 4 cut(s) 128, 241, 615, 1041
MalI GATC 3 cut(s) 67, 267, 572
MbiI CCGCTC 1 cut(s) 1112
MboI GATC 3 cut(s) 65, 265, 570
MboII GAAGA 2 cut(s) 653, 935
MhlI GDGCHC 4 cut(s) 654, 699, 1052, 1080
MluCI AATT 7 cut(s) 278, 292, 380, 430, 837, 914, 1003
MlyI GAGTC 2 cut(s) 322, 598
MmeI TCCRAC 1 cut(s) 534
Mph1103I ATGCAT 1 cut(s) 948
MroXI GAANNNNTTC 1 cut(s) 415
MslI CAYNNNNRTG 2 cut(s) 1023, 1083
MspA1I CMGCKG 1 cut(s) 1244
MspI CCGG 4 cut(s) 580, 902, 954, 1140
MspR9I CCNGG 4 cut(s) 94, 523, 609, 1141
MvaI CCWGG 3 cut(s) 94, 523, 609
MvnI CGCG 1 cut(s) 602
MwoI GCNNNNNNNGC 6 cut(s) 395, 635, 644, 817, 1015, 1185
NciI CCSGG 1 cut(s) 1141
NdeII GATC 3 cut(s) 65, 265, 570
NlaIII CATG 6 cut(s) 152, 680, 856, 946, 950, 1099
NlaIV GGNNCC 2 cut(s) 821, 1253
NmeAIII GCCGAG 1 cut(s) 775
NmuCI GTSAC 3 cut(s) 128, 241, 1041
NsiI ATGCAT 1 cut(s) 948
NspI RCATGY 2 cut(s) 680, 950
PaeI GCATGC 1 cut(s) 950
PaeR7I CTCGAG 1 cut(s) 393
PciI ACATGT 1 cut(s) 676
PdmI GAANNNNTTC 1 cut(s) 415
PfeI GAWTC 2 cut(s) 37, 471
PflMI CCANNNNNTGG 1 cut(s) 1121
PfoI TCCNGGA 1 cut(s) 607
PleI GAGTC 2 cut(s) 322, 598
PpsI GAGTC 2 cut(s) 322, 598
PpuMI RGGWCCY 1 cut(s) 979
PscI ACATGT 1 cut(s) 676
Psp124BI GAGCTC 1 cut(s) 699
Psp1406I AACGTT 1 cut(s) 1146
Psp5II RGGWCCY 1 cut(s) 979
Psp6I CCWGG 3 cut(s) 92, 521, 607
PspEI GGTNACC 1 cut(s) 128
PspGI CCWGG 3 cut(s) 92, 521, 607
PspN4I GGNNCC 2 cut(s) 821, 1253
PspPI GGNCC 2 cut(s) 863, 979
PspPPI RGGWCCY 1 cut(s) 979
PspXI VCTCGAGB 1 cut(s) 393
PstI CTGCAG 2 cut(s) 235, 1243
PvuII CAGCTG 1 cut(s) 1244
RsaI GTAC 3 cut(s) 79, 109, 182
RsaNI GTAC 3 cut(s) 78, 108, 181
RseI CAYNNNNRTG 2 cut(s) 1023, 1083
SacI GAGCTC 1 cut(s) 699
SalI GTCGAC 1 cut(s) 767
Sau3AI GATC 3 cut(s) 65, 265, 570
Sau96I GGNCC 2 cut(s) 863, 979
ScaI AGTACT 2 cut(s) 79, 109
SchI GAGTC 2 cut(s) 322, 598
ScrFI CCNGG 4 cut(s) 94, 523, 609, 1141
SduI GDGCHC 4 cut(s) 654, 699, 1052, 1080
SfaNI GCATC 6 cut(s) 21, 109, 407, 516, 736, 790
SfcI CTRYAG 3 cut(s) 231, 531, 1239
Sfr274I CTCGAG 1 cut(s) 393
SinI GGWCC 1 cut(s) 979
SlaI CTCGAG 1 cut(s) 393
SmiMI CAYNNNNRTG 2 cut(s) 1023, 1083
SmlI CTYRAG 3 cut(s) 393, 620, 1067
SmoI CTYRAG 3 cut(s) 393, 620, 1067
SpeI ACTAGT 1 cut(s) 238
SphI GCATGC 1 cut(s) 950
Sse9I AATT 7 cut(s) 278, 292, 380, 430, 837, 914, 1003
SsiI CCGC 9 cut(s) 88, 144, 480, 647, 712, 729, 987, 1110, 1179
SspMI CTAG 4 cut(s) 105, 116, 203, 239
SstI GAGCTC 1 cut(s) 699
StyD4I CCNGG 4 cut(s) 92, 521, 607, 1139
TaaI ACNGT 3 cut(s) 72, 361, 824
TaiI ACGT 3 cut(s) 1041, 1149, 1215
TaqI TCGA 4 cut(s) 394, 514, 768, 1083
TasI AATT 7 cut(s) 278, 292, 380, 430, 837, 914, 1003
TatI WGTACW 2 cut(s) 77, 107
TauI GCSGC 3 cut(s) 90, 147, 989
TfiI GAWTC 2 cut(s) 37, 471
TscAI CASTG 4 cut(s) 75, 354, 375, 1050
TseFI GTSAC 3 cut(s) 128, 241, 1041
TseI GCWGC 7 cut(s) 230, 233, 386, 389, 489, 1238, 1241
Tsp45I GTSAC 3 cut(s) 128, 241, 1041
TspDTI ATGAA 6 cut(s) 165, 408, 869, 931, 1101, 1220
TspGWI ACGGA 3 cut(s) 517, 1141, 1183
TspRI CASTG 4 cut(s) 75, 354, 375, 1050
Van91I CCANNNNNTGG 1 cut(s) 1121
VpaK11BI GGWCC 1 cut(s) 979
XapI RAATTY 3 cut(s) 292, 837, 914
XbaI TCTAGA 1 cut(s) 115
XceI RCATGY 2 cut(s) 680, 950
XhoI CTCGAG 1 cut(s) 393
XmiI GTMKAC 1 cut(s) 768
XmnI GAANNNNTTC 1 cut(s) 415
XspI CTAG 4 cut(s) 105, 116, 203, 239
ZrmI AGTACT 2 cut(s) 79, 109
Zsp2I ATGCAT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.