Rw1G009720
MYB Family

Chlorophyll(Ide) b reductase NOL

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
N/A
Physical Location & Seq
Forward (+)
21383694 .. 21384367
674 bp
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UTR
Exon/CDS
Intron
Rw1G009720.1

Sequence Viewer

Length: 246 bp
ATGGTTACAACTGATCTTCTCATGTCTGGTGCAACTACGAAGCAGGCAAAGTTTTTCATCAATGTTCTGGCAGAACCAGCTGAAGTGGTTGCCGAATATCTTGTTCCAAATATAAGATCCATCCCTACCAAGGGATCAATGAAGCCCACTTACATCCGTTTCCTAACAGGGATGAAAGCCTACTCCCAGATATTCTCAAGACTTGCTTTTGGTGCAAGAAGGAACAGATATTTGCTCGAAGATTAA

Protein Analysis

81

Amino Acids

9.15

Weight (kDa)

9.89

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 111, 142
AcuI CTGAAG 1 cut(s) 102
AfiI CCNNNNNNNGG 2 cut(s) 130, 131
AluBI AGCT 1 cut(s) 80
AluI AGCT 1 cut(s) 80
AlwI GGATC 2 cut(s) 111, 142
BarI GAAGNNNNNNTAC 2 cut(s) 134, 166
BccI CCATC 1 cut(s) 128
BpuEI CTTGAG 1 cut(s) 181
BsaJI CCNNGG 1 cut(s) 129
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 131
BseDI CCNNGG 1 cut(s) 129
BseGI GGATG 3 cut(s) 120, 153, 177
BseLI CCNNNNNNNGG 2 cut(s) 130, 131
BslI CCNNNNNNNGG 2 cut(s) 130, 131
Bsp143I GATC 3 cut(s) 13, 116, 134
BspPI GGATC 2 cut(s) 111, 142
BssECI CCNNGG 1 cut(s) 129
BssMI GATC 3 cut(s) 13, 116, 134
BssT1I CCWWGG 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 45
BstF5I GGATG 3 cut(s) 120, 153, 177
BstKTI GATC 3 cut(s) 16, 119, 137
BstMBI GATC 3 cut(s) 13, 116, 134
BstMWI GCNNNNNNNGC 2 cut(s) 77, 212
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BtsCI GGATG 3 cut(s) 120, 153, 177
Cac8I GCNNGC 1 cut(s) 45
CviAII CATG 1 cut(s) 22
CviJI RGCY 3 cut(s) 80, 145, 179
CviKI_1 RGCY 3 cut(s) 80, 145, 179
DpnI GATC 3 cut(s) 15, 118, 136
DpnII GATC 3 cut(s) 13, 116, 134
Eco130I CCWWGG 1 cut(s) 129
Eco57I CTGAAG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 129
FaeI CATG 1 cut(s) 25
FaiI YATR 2 cut(s) 23, 113
FalI AAGNNNNNCTT 2 cut(s) 190, 222
FatI CATG 1 cut(s) 21
FokI GGATG 3 cut(s) 107, 140, 184
Hin1II CATG 1 cut(s) 25
Hpy188III TCNNGA 1 cut(s) 198
HpyAV CCTTC 1 cut(s) 213
HpyCH4V TGCA 2 cut(s) 32, 215
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 212
Hsp92II CATG 1 cut(s) 25
Kzo9I GATC 3 cut(s) 13, 116, 134
LpnPI CCDG 6 cut(s) 12, 29, 53, 90, 153, 200
MaeIII GTNAC 1 cut(s) 4
MalI GATC 3 cut(s) 15, 118, 136
MboI GATC 3 cut(s) 13, 116, 134
MboII GAAGA 1 cut(s) 8
MflI RGATCY 1 cut(s) 116
MseI TTAA 1 cut(s) 244
MspA1I CMGCKG 1 cut(s) 80
MwoI GCNNNNNNNGC 2 cut(s) 77, 212
NdeII GATC 3 cut(s) 13, 116, 134
NlaIII CATG 1 cut(s) 25
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 80
SaqAI TTAA 1 cut(s) 244
Sau3AI GATC 3 cut(s) 13, 116, 134
SetI ASST 1 cut(s) 82
SmlI CTYRAG 1 cut(s) 196
SmoI CTYRAG 1 cut(s) 196
StyI CCWWGG 1 cut(s) 129
TaqI TCGA 1 cut(s) 237
Tru1I TTAA 1 cut(s) 244
Tru9I TTAA 1 cut(s) 244
TspDTI ATGAA 3 cut(s) 46, 155, 188
TspGWI ACGGA 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.