Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

9670712 .. 9677454

Gene Structure 6743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG113600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGCATTTAGGGGTTTTGGGGGGTTTATCTTTCTACCACTCCATATACTCACCTCCCTTGCCCACTCAAATGGCCGCCGTCGGAGCTCTCTCGCCGTTCCCCTACAGCCTCCTCTGGCGGCCCAAGTCTTCAAACCGCACCGTTTCGTGCTCCGTCGGCTCTTCTACTGCTCCTCCTACAGGCACGCGCGGGTCTAATTATAAAAGATCAGGAAGAGTGGAGGGGCCTCGGAAAAGTATGGAAGACTCTGTTCAGAGAAAGATGGAGCAGTTTTATGAAGGGAGAGATGGTCCACCACTGCGTGTTTTGCCAATCGGTGGACTGGGAGAAATTGGGATGAATTGCATGCTGGTTGGGAATTATGATCGATATATACTGATTGATGCCGGTATCATGTTTCCAGAGACAACAAGTGAATCTTCTGTGGCAGATGCACTGATGAGGCATATTTCAGCAGCTCAAGGGAGGGTTATTACCACCCAGTTTGCATCAAACATACATCGACTTGGAAGTGTGAAAGCTGCTGCTGATGCTACTGGTAGAAAGTTGGTATTTGTTGGTATGTCCTTAAGGACATATCTTGATGCAGCTTGGAGGGATGGGAAGGCACCAATTGATCCATCAACCCTGGTGAAAGTGGAAGATATTGATTCCTATGCTCCAAAGGATTTGCTAATCGTCACAACTGGCTCTCAAGCAGAACCACGTGCAGCTCTAAATCTTGCATCATTCGGAAGTAGTCATTCTGTCAAACTGACCAAGGAAGATATAATTTTATATTCTGCTAAGGTTATTCCTGGTAATGAATCTCGGGTAATGAAAATGTTAAACCGCATATCAGATATGGGATCAACGATAGTGATGGGTAAGAACGAGGGGCTGCACACTTCTGGTCATGGGTACCGTGGAGAACTGGAGGAAGTGCTTAGAATTGTGAAGCCACAGCACTTTCTGCCCATACATGGAGAACTCTTGTTTCTCAAAGAGCATGAATTGCTTGGGAGATCAACTGGCATCCATCACACCACTGTAATAAAGAATGGGGAAATGCTTGGGGTTTCTCATTTGAGAAACAGAAGGGTACTTTCAAATGGTTTCACCTTGCTTGGAAAGGAGAATTTGCAGTTGAAATATAGTGATGGTGATAAGGCATTTGGTACATCAAGCGACCTTTGTGTTGATGAGAGACTAAAAATTGCCTTAGATGGCATAATAGTGATCAGCATGGAAATTTTACGGCCCCAAAATGTAAATGGTCTGGCTGAAAGTAGCATAAAAGGAAAGATAAGAATTACCACCCGATGTTTGTGGCTTGACAAAGGAAAGCTATATGATGCGCTCTATAAAGCTGCCCATGCTGCACTGTCAAGCTGCCCTATTAATTGTCCTTTACCTCACATGGAAAGAACAGTGTCTGAGGTATTGAGGAAATTGGTAAGAAAATACAGTGGTAAAAGGCCAGAAGTTATTGCTATTGCCATGGAGAATCCCACAGCAGTTCTTGCCGATGAGGTCAGTACAAGACTATCTGGAAAGTCCCATGTTGGTTACGAGAGGTCAGCTTTACGAAAAGTAATTGATGGAAATTCAAATAAGAGTCGACCAACTAGGACAGAAGCAAATGCAGCCAAGGACAATACACATCTGCAGAGTACCACTTCAGAGCAAGATTTTGAAGATGATGGTGGTGAAGTCAAAGCACCACTACCTGTGGAAGTTTCCGCAGTCAATCCCAAAAAGCTTTCTTCTGATACAAAGGAGCCAGATGATTTCTGGAATGCAATGGTCAAGTTATCAGCTGGTGACAAATTAGCAGAAGATAAAGATGGTTTGGTTCTGCAAGAGGAACATGTAAAGAAAGATGACTCTGAAAGCACTGAGACACCAAATCCTTCAAAGCCGGTGAAACGGAACAAATGGAAGCCCGAGGAGGTTAAAAAGTTTATTGAAATGCGTGGGAAACAGCATAGCAGATTTCAAGTTGTGAAGGGGAGAATGGCGCTATGGGAAGAAATATCTAGAAACTTGTTGGCTGAGGGGATCAATCGAAGCCCCGGGCAATGCAAATCTTTGTGGTCATCTTTGGTTCAGAAATACGAGGAAAGCAAGAGTGGAAAGAGAAGCCGAAAGAGTTGGCCATATTATGAGGAAATGGATGGAGCTTTGTCTGATTCAGAGGCAATGGCAACCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008409 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009914 GO:0009942 GO:0009987 GO:0010154 GO:0010817 GO:0016043 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B Lactamase_B_2 Myb_DNA-bind_4 RMMBL

Protein Analysis

731

Amino Acids

80.59

Weight (kDa)

9.13

Isoelectric Point (pI)

43.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_J_b_CASP	PF22505	154 - 279	1e-29	Ribonuclease J, beta-CASP domain
RMMBL	PF07521	294 - 340	8.3e-07	Zn-dependent metallo-hydrolase RNA specificity domain
Myb_DNA-bind_4	PF13837	637 - 719	2.4e-22	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	201
Acc65I	GGTACC	1 cut(s)	900
AccB1I	GGYRCC	2 cut(s)	607, 900
AccB7I	CCANNNNNTGG	1 cut(s)	317
AccI	GTMKAC	1 cut(s)	1600
AccII	CGCG	2 cut(s)	187, 189
AciI	CCGC	6 cut(s)	75, 118, 136, 189, 832, 1722
AclWI	GGATC	3 cut(s)	611, 856, 2048
AcoI	YGGCCR	2 cut(s)	72, 2135
AcsI	RAATTY	3 cut(s)	1117, 1230, 1585
AcuI	CTGAAG	1 cut(s)	1644
AcvI	CACGTG	1 cut(s)	707
AdeI	CACNNNGTG	1 cut(s)	302
AfaI	GTAC	5 cut(s)	902, 1083, 1159, 1519, 1654
AfiI	CCNNNNNNNGG	3 cut(s)	179, 317, 962
AflII	CTTAAG	1 cut(s)	568
AflIII	ACRYGT	1 cut(s)	1849
AgsI	TTSAA	8 cut(s)	132, 1089, 1129, 1590, 1676, 1896, 1949, 1979
AjnI	CCWGG	2 cut(s)	627, 796
Alw21I	GWGCWC	2 cut(s)	88, 152
Alw26I	GTCTC	3 cut(s)	398, 1180, 1874
AlwI	GGATC	3 cut(s)	611, 856, 2048
AlwNI	CAGNNNCTG	1 cut(s)	1415
Ama87I	CYCGRG	3 cut(s)	810, 1925, 2054
AoxI	GGCC	6 cut(s)	72, 119, 224, 1238, 1457, 2135
ApoI	RAATTY	3 cut(s)	1117, 1230, 1585
AseI	ATTAAT	1 cut(s)	1380
Asp718I	GGTACC	1 cut(s)	900
AspLEI	GCGC	3 cut(s)	189, 1339, 2002
AspS9I	GGNCC	4 cut(s)	120, 224, 290, 1239
AsuC2I	CCSGG	2 cut(s)	2055, 2056
AsuHPI	GGTGA	7 cut(s)	42, 643, 1090, 1154, 1700, 1814, 1915
AvaI	CYCGRG	3 cut(s)	810, 1925, 2054
AvaII	GGWCC	1 cut(s)	290
BalI	TGGCCA	1 cut(s)	2137
BanI	GGYRCC	2 cut(s)	607, 900
BanII	GRGCYC	1 cut(s)	88
BbrPI	CACGTG	1 cut(s)	707
BbsI	GAAGAC	2 cut(s)	120, 249
Bbv12I	GWGCWC	2 cut(s)	88, 152
BbvCI	CCTCAGC	1 cut(s)	2034
BceAI	ACGGC	3 cut(s)	62, 79, 1253
BciT130I	CCWGG	2 cut(s)	629, 798
BclI	TGATCA	1 cut(s)	1218
BcnI	CCSGG	2 cut(s)	2055, 2056
BcoDI	GTCTC	3 cut(s)	398, 1180, 1874
BfaI	CTAG	2 cut(s)	1608, 2019
BfmI	CTRYAG	3 cut(s)	103, 177, 1646
BfoI	RGCGCY	1 cut(s)	2003
BfrI	CTTAAG	1 cut(s)	568
Bme1390I	CCNGG	4 cut(s)	629, 798, 2055, 2056
Bme18I	GGWCC	1 cut(s)	290
BmeT110I	CYCGRG	3 cut(s)	810, 1925, 2054
BmgT120I	GGNCC	4 cut(s)	120, 224, 290, 1239
BmiI	GGNNCC	5 cut(s)	225, 609, 902, 1241, 1761
BmrFI	CCNGG	4 cut(s)	629, 798, 2055, 2056
BmrI	ACTGGG	2 cut(s)	332, 475
BmsI	GCATC	8 cut(s)	373, 421, 497, 520, 574, 734, 1023, 1324
BmuI	ACTGGG	2 cut(s)	332, 475
BpiI	GAAGAC	2 cut(s)	120, 249
BpmI	CTGGAG	1 cut(s)	935
Bpu10I	CCTNAGC	2 cut(s)	786, 2034
BpuEI	CTTGAG	2 cut(s)	444, 678
BpuMI	CCSGG	2 cut(s)	2055, 2056
Bsa29I	ATCGAT	1 cut(s)	367
BsaAI	YACGTR	1 cut(s)	707
BsaJI	CCNNGG	9 cut(s)	227, 627, 759, 904, 1479, 1629, 1926, 2053, 2054
BsaXI	ACNNNNNCTCC	4 cut(s)	157, 187, 274, 304
Bsc4I	CCNNNNNNNGG	3 cut(s)	179, 317, 962
Bse118I	RCCGGY	2 cut(s)	386, 1900
Bse1I	ACTGG	6 cut(s)	327, 481, 541, 691, 918, 1015
Bse3DI	GCAATG	3 cut(s)	1788, 2066, 2187
BseBI	CCWGG	2 cut(s)	629, 798
BseCI	ATCGAT	1 cut(s)	367
BseDI	CCNNGG	9 cut(s)	227, 627, 759, 904, 1479, 1629, 1926, 2053, 2054
BseGI	GGATG	4 cut(s)	342, 604, 1014, 2161
BseLI	CCNNNNNNNGG	3 cut(s)	179, 317, 962
BseMI	GCAATG	3 cut(s)	1788, 2066, 2187
BseMII	CTCAG	3 cut(s)	1407, 1869, 2025
BseNI	ACTGG	6 cut(s)	327, 481, 541, 691, 918, 1015
BseRI	GAGGAG	3 cut(s)	101, 162, 1943
BsgI	GTGCAG	3 cut(s)	729, 866, 1344
Bsh1236I	CGCG	2 cut(s)	187, 189
BshFI	GGCC	6 cut(s)	74, 121, 226, 1240, 1459, 2137
BshNI	GGYRCC	2 cut(s)	607, 900
BshVI	ATCGAT	1 cut(s)	367
BsiHKAI	GWGCWC	2 cut(s)	88, 152
BsiHKCI	CYCGRG	3 cut(s)	810, 1925, 2054
BsiSI	CCGG	3 cut(s)	387, 1901, 2055
BslFI	GGGAC	1 cut(s)	1522
BslI	CCNNNNNNNGG	3 cut(s)	179, 317, 962
BsmAI	GTCTC	3 cut(s)	398, 1180, 1874
BsmFI	GGGAC	1 cut(s)	1522
BsmI	GAATGC	1 cut(s)	1783
BsnI	GGCC	6 cut(s)	74, 121, 226, 1240, 1459, 2137
BsoBI	CYCGRG	3 cut(s)	810, 1925, 2054
Bsp1286I	GDGCHC	2 cut(s)	88, 152
Bsp143I	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
Bsp19I	CCATGG	1 cut(s)	1479
BspACI	CCGC	6 cut(s)	75, 118, 136, 189, 832, 1722
BspANI	GGCC	6 cut(s)	74, 121, 226, 1240, 1459, 2137
BspCNI	CTCAG	3 cut(s)	1408, 1870, 2026
BspDI	ATCGAT	1 cut(s)	367
BspFNI	CGCG	2 cut(s)	187, 189
BspLI	GGNNCC	5 cut(s)	225, 609, 902, 1241, 1761
BspMAI	CTGCAG	1 cut(s)	1650
BspPI	GGATC	3 cut(s)	611, 856, 2048
BspQI	GCTCTTC	1 cut(s)	166
BspT107I	GGYRCC	2 cut(s)	607, 900
BspTI	CTTAAG	1 cut(s)	568
BsrDI	GCAATG	3 cut(s)	1788, 2066, 2187
BsrFI	RCCGGY	2 cut(s)	386, 1900
BsrI	ACTGG	6 cut(s)	327, 481, 541, 691, 918, 1015
BssAI	RCCGGY	2 cut(s)	386, 1900
BssECI	CCNNGG	9 cut(s)	227, 627, 759, 904, 1479, 1629, 1926, 2053, 2054
BssMI	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
BssT1I	CCWWGG	3 cut(s)	759, 1479, 1629
Bst2UI	CCWGG	2 cut(s)	629, 798
Bst4CI	ACNGT	6 cut(s)	142, 905, 1030, 1365, 1411, 1448
Bst6I	CTCTTC	2 cut(s)	166, 208
BstAFI	CTTAAG	1 cut(s)	568
BstAPI	GCANNNNNTGC	3 cut(s)	952, 994, 1502
BstBAI	YACGTR	1 cut(s)	707
BstC8I	GCNNGC	2 cut(s)	185, 347
BstDEI	CTNAG	6 cut(s)	786, 926, 1201, 1416, 1878, 2034
BstDSI	CCRYGG	2 cut(s)	904, 1479
BstENI	CCTNNNNNAGG	1 cut(s)	177
BstF5I	GGATG	4 cut(s)	342, 604, 1014, 2161
BstFNI	CGCG	2 cut(s)	187, 189
BstH2I	RGCGCY	1 cut(s)	2003
BstHHI	GCGC	3 cut(s)	189, 1339, 2002
BstKTI	GATC	7 cut(s)	209, 367, 619, 851, 1007, 1221, 2043
BstMAI	GTCTC	3 cut(s)	398, 1180, 1874
BstMBI	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
BstNI	CCWGG	2 cut(s)	629, 798
BstNSI	RCATGY	2 cut(s)	349, 1853
BstSCI	CCNGG	4 cut(s)	627, 796, 2053, 2054
BstSFI	CTRYAG	3 cut(s)	103, 177, 1646
BstUI	CGCG	2 cut(s)	187, 189
BstV2I	GAAGAC	2 cut(s)	120, 249
BstXI	CCANNNNNNTGG	1 cut(s)	70
Bsu15I	ATCGAT	1 cut(s)	367
BsuRI	GGCC	6 cut(s)	74, 121, 226, 1240, 1459, 2137
BsuTUI	ATCGAT	1 cut(s)	367
BtgI	CCRYGG	2 cut(s)	904, 1479
BtsCI	GGATG	4 cut(s)	342, 604, 1014, 2161
BtsI	GCAGTG	1 cut(s)	296
BtsIMutI	CAGTG	7 cut(s)	296, 434, 1026, 1361, 1416, 1453, 1875
Cac8I	GCNNGC	2 cut(s)	185, 347
CaiI	CAGNNNCTG	1 cut(s)	1415
CfoI	GCGC	3 cut(s)	189, 1339, 2002
Cfr10I	RCCGGY	2 cut(s)	386, 1900
Cfr13I	GGNCC	4 cut(s)	120, 224, 290, 1239
Cfr9I	CCCGGG	1 cut(s)	2054
ClaI	ATCGAT	1 cut(s)	367
Csp6I	GTAC	5 cut(s)	901, 1082, 1158, 1518, 1653
CspCI	CAANNNNNGTGG	2 cut(s)	466, 501
CviQI	GTAC	5 cut(s)	901, 1082, 1158, 1518, 1653
DdeI	CTNAG	6 cut(s)	786, 926, 1201, 1416, 1878, 2034
DpnI	GATC	7 cut(s)	208, 366, 618, 850, 1006, 1220, 2042
DpnII	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
DraIII	CACNNNGTG	1 cut(s)	302
EaeI	YGGCCR	2 cut(s)	72, 2135
Eam1104I	CTCTTC	2 cut(s)	166, 208
EarI	CTCTTC	2 cut(s)	166, 208
Ecl136II	GAGCTC	1 cut(s)	86
Eco130I	CCWWGG	3 cut(s)	759, 1479, 1629
Eco24I	GRGCYC	1 cut(s)	88
Eco47I	GGWCC	1 cut(s)	290
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	1644
Eco72I	CACGTG	1 cut(s)	707
Eco88I	CYCGRG	3 cut(s)	810, 1925, 2054
EcoICRI	GAGCTC	1 cut(s)	86
EcoNI	CCTNNNNNAGG	1 cut(s)	177
EcoO109I	RGGNCCY	1 cut(s)	224
EcoRII	CCWGG	2 cut(s)	627, 796
EcoT14I	CCWWGG	3 cut(s)	759, 1479, 1629
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	88
ErhI	CCWWGG	3 cut(s)	759, 1479, 1629
FalI	AAGNNNNNCTT	2 cut(s)	403, 435
FaqI	GGGAC	1 cut(s)	1522
FauI	CCCGC	1 cut(s)	182
FbaI	TGATCA	1 cut(s)	1218
FblI	GTMKAC	1 cut(s)	1600
FokI	GGATG	4 cut(s)	349, 611, 1001, 2168
FriOI	GRGCYC	1 cut(s)	88
FspBI	CTAG	2 cut(s)	1608, 2019
GlaI	GCGC	3 cut(s)	188, 1338, 2001
GsuI	CTGGAG	1 cut(s)	935
HaeII	RGCGCY	1 cut(s)	2003
HaeIII	GGCC	6 cut(s)	74, 121, 226, 1240, 1459, 2137
HapII	CCGG	3 cut(s)	387, 1901, 2055
HhaI	GCGC	3 cut(s)	189, 1339, 2002
Hin6I	GCGC	3 cut(s)	187, 1337, 2000
HinP1I	GCGC	3 cut(s)	187, 1337, 2000
HincII	GTYRAC	1 cut(s)	1601
HindII	GTYRAC	1 cut(s)	1601
HindIII	AAGCTT	1 cut(s)	1739
HinfI	GANTC	8 cut(s)	245, 416, 650, 806, 1486, 1597, 1865, 2171
HpaII	CCGG	3 cut(s)	387, 1901, 2055
HphI	GGTGA	7 cut(s)	42, 643, 1090, 1154, 1700, 1814, 1915
Hpy166II	GTNNAC	3 cut(s)	293, 320, 1601
Hpy188III	TCNNGA	6 cut(s)	210, 401, 581, 1530, 1774, 2019
Hpy8I	GTNNAC	3 cut(s)	293, 320, 1601
Hpy99I	CGWCG	2 cut(s)	83, 158
HpyAV	CCTTC	5 cut(s)	272, 598, 1071, 1902, 1981
HpyCH4III	ACNGT	6 cut(s)	142, 905, 1030, 1365, 1411, 1448
HpyCH4IV	ACGT	1 cut(s)	706
HpyF3I	CTNAG	6 cut(s)	786, 926, 1201, 1416, 1878, 2034
HpySE526I	ACGT	1 cut(s)	706
HspAI	GCGC	3 cut(s)	187, 1337, 2000
KpnI	GGTACC	1 cut(s)	904
Ksp22I	TGATCA	1 cut(s)	1218
Kzo9I	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
LguI	GCTCTTC	1 cut(s)	166
LmnI	GCTCC	7 cut(s)	83, 155, 175, 265, 664, 1759, 2159
LweI	GCATC	8 cut(s)	373, 421, 497, 520, 574, 734, 1023, 1324
MaeI	CTAG	2 cut(s)	1608, 2019
MaeII	ACGT	1 cut(s)	706
MaeIII	GTNAC	3 cut(s)	679, 1547, 1802
MalI	GATC	7 cut(s)	208, 366, 618, 850, 1006, 1220, 2042
MboI	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
MfeI	CAATTG	1 cut(s)	612
MhlI	GDGCHC	2 cut(s)	88, 152
MlsI	TGGCCA	1 cut(s)	2137
MluNI	TGGCCA	1 cut(s)	2137
MlyI	GAGTC	3 cut(s)	239, 1606, 1859
MmeI	TCCRAC	1 cut(s)	61
Mox20I	TGGCCA	1 cut(s)	2137
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	2137
MseI	TTAA	4 cut(s)	569, 827, 1380, 1935
MslI	CAYNNNNRTG	2 cut(s)	68, 1214
Msp20I	TGGCCA	1 cut(s)	2137
MspA1I	CMGCKG	1 cut(s)	1799
MspCI	CTTAAG	1 cut(s)	568
MspI	CCGG	3 cut(s)	387, 1901, 2055
MspR9I	CCNGG	4 cut(s)	629, 798, 2055, 2056
MunI	CAATTG	1 cut(s)	612
Mva1269I	GAATGC	1 cut(s)	1783
MvaI	CCWGG	2 cut(s)	629, 798
MvnI	CGCG	2 cut(s)	187, 189
NciI	CCSGG	2 cut(s)	2055, 2056
NcoI	CCATGG	1 cut(s)	1479
NdeII	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
NlaIV	GGNNCC	5 cut(s)	225, 609, 902, 1241, 1761
NmuCI	GTSAC	2 cut(s)	679, 1802
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	349, 1853
PaeI	GCATGC	1 cut(s)	349
PciI	ACATGT	1 cut(s)	1849
PciSI	GCTCTTC	1 cut(s)	166
PctI	GAATGC	1 cut(s)	1783
PfeI	GAWTC	5 cut(s)	416, 650, 806, 1486, 2171
PflMI	CCANNNNNTGG	1 cut(s)	317
PleI	GAGTC	3 cut(s)	239, 1605, 1859
PmaCI	CACGTG	1 cut(s)	707
PmlI	CACGTG	1 cut(s)	707
PpsI	GAGTC	3 cut(s)	239, 1605, 1859
Ppu21I	YACGTR	1 cut(s)	707
PscI	ACATGT	1 cut(s)	1849
PshBI	ATTAAT	1 cut(s)	1380
PsiI	TTATAA	1 cut(s)	201
Psp124BI	GAGCTC	1 cut(s)	88
Psp6I	CCWGG	2 cut(s)	627, 796
PspCI	CACGTG	1 cut(s)	707
PspGI	CCWGG	2 cut(s)	627, 796
PspN4I	GGNNCC	5 cut(s)	225, 609, 902, 1241, 1761
PspPI	GGNCC	4 cut(s)	120, 224, 290, 1239
PstI	CTGCAG	1 cut(s)	1650
PstNI	CAGNNNCTG	1 cut(s)	1415
PvuII	CAGCTG	1 cut(s)	1799
RsaI	GTAC	5 cut(s)	902, 1083, 1159, 1519, 1654
RsaNI	GTAC	5 cut(s)	901, 1082, 1158, 1518, 1653
RseI	CAYNNNNRTG	2 cut(s)	68, 1214
SacI	GAGCTC	1 cut(s)	88
SalI	GTCGAC	1 cut(s)	1599
SapI	GCTCTTC	1 cut(s)	166
SaqAI	TTAA	4 cut(s)	569, 827, 1380, 1935
Sau3AI	GATC	7 cut(s)	206, 364, 616, 848, 1004, 1218, 2040
Sau96I	GGNCC	4 cut(s)	120, 224, 290, 1239
SchI	GAGTC	3 cut(s)	239, 1606, 1859
ScrFI	CCNGG	4 cut(s)	629, 798, 2055, 2056
SduI	GDGCHC	2 cut(s)	88, 152
SfaNI	GCATC	8 cut(s)	373, 421, 497, 520, 574, 734, 1023, 1324
SfcI	CTRYAG	3 cut(s)	103, 177, 1646
SinI	GGWCC	1 cut(s)	290
SmaI	CCCGGG	1 cut(s)	2056
SmiMI	CAYNNNNRTG	2 cut(s)	68, 1214
SmlI	CTYRAG	3 cut(s)	459, 568, 693
SmoI	CTYRAG	3 cut(s)	459, 568, 693
SphI	GCATGC	1 cut(s)	349
SsiI	CCGC	6 cut(s)	75, 118, 136, 189, 832, 1722
SspMI	CTAG	2 cut(s)	1608, 2019
SstI	GAGCTC	1 cut(s)	88
StyD4I	CCNGG	4 cut(s)	627, 796, 2053, 2054
StyI	CCWWGG	3 cut(s)	759, 1479, 1629
TaaI	ACNGT	6 cut(s)	142, 905, 1030, 1365, 1411, 1448
TaiI	ACGT	1 cut(s)	709
TaqI	TCGA	4 cut(s)	367, 502, 1600, 2047
TatI	WGTACW	1 cut(s)	1517
TauI	GCSGC	2 cut(s)	77, 121
TfiI	GAWTC	5 cut(s)	416, 650, 806, 1486, 2171
Tru1I	TTAA	4 cut(s)	569, 827, 1380, 1935
Tru9I	TTAA	4 cut(s)	569, 827, 1380, 1935
TscAI	CASTG	7 cut(s)	303, 441, 1033, 1368, 1416, 1453, 1882
TseFI	GTSAC	2 cut(s)	679, 1802
Tsp45I	GTSAC	2 cut(s)	679, 1802
TspDTI	ATGAA	5 cut(s)	291, 353, 819, 833, 1005
TspGWI	ACGGA	2 cut(s)	142, 1924
TspMI	CCCGGG	1 cut(s)	2054
TspRI	CASTG	7 cut(s)	303, 441, 1033, 1368, 1416, 1453, 1882
Van91I	CCANNNNNTGG	1 cut(s)	317
Vha464I	CTTAAG	1 cut(s)	568
VpaK11BI	GGWCC	1 cut(s)	290
VspI	ATTAAT	1 cut(s)	1380
XagI	CCTNNNNNAGG	1 cut(s)	177
XapI	RAATTY	3 cut(s)	1117, 1230, 1585
XbaI	TCTAGA	1 cut(s)	2018
XceI	RCATGY	2 cut(s)	349, 1853
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1250, 1770
XmaI	CCCGGG	1 cut(s)	2054
XmiI	GTMKAC	1 cut(s)	1600
XspI	CTAG	2 cut(s)	1608, 2019
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.