Rh2CG170600
MYB Family

RNA polymerase II transcription regulator recruiting activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
N/A
Physical Location & Seq
Reverse (-)
15250478 .. 15251859
1382 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG170600.1

Sequence Viewer

Length: 198 bp
ATGAGGACAAGTTTGAGCGGTAAACTAGACATGATTTCTGAAAATGGGAACACTCAGCCTTATGACATGGTCGTGTTAGAGAAGCCAGTCACAAACAAAGATTCACATTGCTCCAAAGCAGAAATAAAAATTGAGAACAAGACGCTGAAGATTTATGAGCCAGTTACTCAAAAGCCTTCTTCATCTTTGAGGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

65

Amino Acids

7.28

Weight (kDa)

8.82

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 18
AciI CCGC 1 cut(s) 18
AcuI CTGAAG 1 cut(s) 167
BfaI CTAG 1 cut(s) 26
Bse1I ACTGG 2 cut(s) 86, 161
Bse3DI GCAATG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 106
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 2 cut(s) 86, 161
BspACI CCGC 1 cut(s) 18
BspCNI CTCAG 1 cut(s) 67
BsrBI CCGCTC 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 106
BsrI ACTGG 2 cut(s) 86, 161
BstDEI CTNAG 1 cut(s) 54
CseI GACGC 1 cut(s) 151
CviAII CATG 2 cut(s) 31, 67
CviJI RGCY 5 cut(s) 58, 85, 160, 175, 194
CviKI_1 RGCY 5 cut(s) 58, 85, 160, 175, 194
DdeI CTNAG 1 cut(s) 54
Eco57I CTGAAG 1 cut(s) 167
FaeI CATG 2 cut(s) 34, 70
FaiI YATR 4 cut(s) 32, 63, 68, 156
FatI CATG 2 cut(s) 30, 66
FspBI CTAG 1 cut(s) 26
HgaI GACGC 1 cut(s) 151
Hin1II CATG 2 cut(s) 34, 70
HinfI GANTC 1 cut(s) 101
Hpy166II GTNNAC 1 cut(s) 23
Hpy188I TCNGA 1 cut(s) 40
Hpy8I GTNNAC 1 cut(s) 23
HpyAV CCTTC 1 cut(s) 186
HpyF3I CTNAG 1 cut(s) 54
Hsp92II CATG 2 cut(s) 34, 70
LmnI GCTCC 1 cut(s) 116
LpnPI CCDG 2 cut(s) 99, 174
MaeI CTAG 1 cut(s) 26
MaeIII GTNAC 2 cut(s) 88, 163
MbiI CCGCTC 1 cut(s) 18
MboII GAAGA 2 cut(s) 160, 171
MluCI AATT 1 cut(s) 129
MnlI CCTC 1 cut(s) 183
MseI TTAA 1 cut(s) 196
MslI CAYNNNNRTG 1 cut(s) 71
NlaIII CATG 2 cut(s) 34, 70
NmuCI GTSAC 1 cut(s) 88
PfeI GAWTC 1 cut(s) 101
PflFI GACNNNGTC 1 cut(s) 68
PsyI GACNNNGTC 1 cut(s) 68
RseI CAYNNNNRTG 1 cut(s) 71
SaqAI TTAA 1 cut(s) 196
SgeI CNNG 8 cut(s) 21, 38, 43, 79, 85, 98, 151, 173
SmiMI CAYNNNNRTG 1 cut(s) 71
Sse9I AATT 1 cut(s) 129
SsiI CCGC 1 cut(s) 18
SspMI CTAG 1 cut(s) 26
TasI AATT 1 cut(s) 129
TfiI GAWTC 1 cut(s) 101
Tru1I TTAA 1 cut(s) 196
Tru9I TTAA 1 cut(s) 196
TseFI GTSAC 1 cut(s) 88
Tsp45I GTSAC 1 cut(s) 88
TspDTI ATGAA 1 cut(s) 171
Tth111I GACNNNGTC 1 cut(s) 68
XspI CTAG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.